RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 NTM-AS1Q6ZSK4 140 aa12.6□□□□□ -0.39
UBL3-201ENST00000380680 MAST4O15021 2626 aa12.59□□□□□ -0.39
UBL3-201ENST00000380680 LINC00643Q86TS7 51 aa12.59□□□□□ -0.39
UBL3-201ENST00000380680 CITED1Q99966 193 aa12.58□□□□□ -0.39
UBL3-201ENST00000380680 KALRNO60229 2985 aa12.58□□□□□ -0.4
UBL3-201ENST00000380680 NANOS2P60321 138 aaKnown RBP12.58□□□□□ -0.4
UBL3-201ENST00000380680 IGKV2-24A0A0C4DH68 120 aa12.58□□□□□ -0.4
UBL3-201ENST00000380680 C9orf116Q5BN46 136 aaPredicted RBP12.57□□□□□ -0.4
UBL3-201ENST00000380680 UNQ6190/PRO20217Q6UXQ8 127 aa12.57□□□□□ -0.4
UBL3-201ENST00000380680 CYSRT1A8MQ03 144 aa12.56□□□□□ -0.4
UBL3-201ENST00000380680 A0A0J9YWU9 116 aa12.56□□□□□ -0.4
UBL3-201ENST00000380680 SYCNQ0VAF6 134 aa12.56□□□□□ -0.4
UBL3-201ENST00000380680 COL12A1Q99715 3063 aa12.56□□□□□ -0.4
UBL3-201ENST00000380680 ZZEF1O43149 2961 aa12.56□□□□□ -0.4
UBL3-201ENST00000380680 FUSP35637 526 aaKnown RBP eCLIP12.56□□□□□ -0.4
UBL3-201ENST00000380680 DMXL1Q9Y485 3027 aa12.56□□□□□ -0.4
UBL3-201ENST00000380680 TRAV10A0A0B4J240 114 aa12.54□□□□□ -0.4
UBL3-201ENST00000380680 A0A1B0GX51 115 aa12.54□□□□□ -0.4
UBL3-201ENST00000380680 Q6ZTC4 211 aa12.53□□□□□ -0.4
UBL3-201ENST00000380680 LOC400499M0QZD8 3231 aa12.53□□□□□ -0.4
UBL3-201ENST00000380680 RNF183Q96D59 192 aa12.53□□□□□ -0.4
UBL3-201ENST00000380680 CFAP47Q6ZTR5 3102 aa12.52□□□□□ -0.4
UBL3-201ENST00000380680 H3BQ85 93 aa12.52□□□□□ -0.41
UBL3-201ENST00000380680 XGP55808 180 aa12.52□□□□□ -0.41
UBL3-201ENST00000380680 PRR3P79522 188 aaKnown RBP12.52□□□□□ -0.41
UBL3-201ENST00000380680 TEP1Q99973 2627 aaKnown RBP12.51□□□□□ -0.41
UBL3-201ENST00000380680 NREPQ16612 68 aa12.51□□□□□ -0.41
UBL3-201ENST00000380680 A0A1B0GUV1 79 aa12.51□□□□□ -0.41
UBL3-201ENST00000380680 CDK2AP2O75956 126 aa12.51□□□□□ -0.41
UBL3-201ENST00000380680 Q6ZQY7 126 aa12.5□□□□□ -0.41
UBL3-201ENST00000380680 COX17Q14061 63 aa12.49□□□□□ -0.41
UBL3-201ENST00000380680 LRBAP50851 2863 aa12.49□□□□□ -0.41
UBL3-201ENST00000380680 KLK5Q9Y337 293 aaPredicted RBP12.49□□□□□ -0.41
UBL3-201ENST00000380680 ATOX1O00244 68 aa12.49□□□□□ -0.41
UBL3-201ENST00000380680 IGLV5-39A0A0G2JS06 123 aa12.48□□□□□ -0.41
UBL3-201ENST00000380680 SDIM1Q6ZPB5 146 aa12.48□□□□□ -0.41
UBL3-201ENST00000380680 SS18L2Q9UHA2 77 aa12.48□□□□□ -0.41
UBL3-201ENST00000380680 TRAV23DV6A0A075B6W5 121 aa12.48□□□□□ -0.41
UBL3-201ENST00000380680 IGHV3OR16-9A0A0B4J2B5 98 aa12.47□□□□□ -0.41
UBL3-201ENST00000380680 NDUFV3P56181 108 aaKnown RBP12.47□□□□□ -0.41
UBL3-201ENST00000380680 PDE6GP18545 87 aa12.47□□□□□ -0.41
UBL3-201ENST00000380680 TACC2O95359 2948 aa12.47□□□□□ -0.41
UBL3-201ENST00000380680 IGKV2-28A0A075B6P5 120 aa12.46□□□□□ -0.41
UBL3-201ENST00000380680 IGKV2D-28P01615 120 aa12.46□□□□□ -0.41
UBL3-201ENST00000380680 RPL28P46779 137 aaKnown RBP12.46□□□□□ -0.41
UBL3-201ENST00000380680 CELA1Q9UNI1 258 aa12.46□□□□□ -0.42
UBL3-201ENST00000380680 TEX15Q9BXT5 2789 aa12.45□□□□□ -0.42
UBL3-201ENST00000380680 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.45□□□□□ -0.42
UBL3-201ENST00000380680 HIGD2AQ9BW72 106 aa12.45□□□□□ -0.42
UBL3-201ENST00000380680 C6orf223Q8N319 242 aa12.44□□□□□ -0.42
UBL3-201ENST00000380680 UBE2AP49459 152 aa12.43□□□□□ -0.42
UBL3-201ENST00000380680 FAM19A5Q7Z5A7 132 aaPredicted RBP12.43□□□□□ -0.42
UBL3-201ENST00000380680 X6R8D5 127 aa12.43□□□□□ -0.42
UBL3-201ENST00000380680 WFDC10BQ8IUB3 73 aa12.42□□□□□ -0.42
UBL3-201ENST00000380680 LYPD5Q6UWN5 251 aa12.42□□□□□ -0.42
UBL3-201ENST00000380680 LINC00337Q8N6G1 96 aa12.41□□□□□ -0.42
UBL3-201ENST00000380680 PKIGQ9Y2B9 76 aa12.41□□□□□ -0.42
UBL3-201ENST00000380680 USP34Q70CQ2 3546 aa12.41□□□□□ -0.42
UBL3-201ENST00000380680 IGLV5-45A0A087WSX0 123 aa12.41□□□□□ -0.42
UBL3-201ENST00000380680 A8MTW9 85 aa12.41□□□□□ -0.42
UBL3-201ENST00000380680 M0R378 163 aa12.41□□□□□ -0.42
UBL3-201ENST00000380680 ZNF575Q86XF7 245 aa12.4□□□□□ -0.42
UBL3-201ENST00000380680 UNC79Q9P2D8 2635 aa12.4□□□□□ -0.43
UBL3-201ENST00000380680 A0A087WYN8 130 aa12.39□□□□□ -0.43
UBL3-201ENST00000380680 ZNF73O43830 326 aaPredicted RBP12.39□□□□□ -0.43
UBL3-201ENST00000380680 C14orf177Q52M58 125 aa12.38□□□□□ -0.43
UBL3-201ENST00000380680 MUC7Q8TAX7 377 aa12.38□□□□□ -0.43
UBL3-201ENST00000380680 EGFEM1PQ0D2K5 195 aa12.37□□□□□ -0.43
UBL3-201ENST00000380680 TRBV10-3A0A0K0K1G6 114 aa12.37□□□□□ -0.43
UBL3-201ENST00000380680 SCXQ7RTU7 201 aa12.37□□□□□ -0.43
UBL3-201ENST00000380680 SMCPP49901 116 aaPredicted RBP12.36□□□□□ -0.43
UBL3-201ENST00000380680 UPK3BQ9BT76 320 aa12.36□□□□□ -0.43
UBL3-201ENST00000380680 RPL37AP8A6NKH3 93 aa12.36□□□□□ -0.43
UBL3-201ENST00000380680 SOSTDC1Q6X4U4 206 aa12.35□□□□□ -0.43
UBL3-201ENST00000380680 ENHOQ6UWT2 76 aa12.35□□□□□ -0.43
UBL3-201ENST00000380680 FAM19A1Q7Z5A9 133 aa12.35□□□□□ -0.43
UBL3-201ENST00000380680 KRTAP1-3Q8IUG1 177 aa12.35□□□□□ -0.43
UBL3-201ENST00000380680 ITPR1Q14643 2758 aa12.35□□□□□ -0.43
UBL3-201ENST00000380680 CCKP06307 115 aa12.34□□□□□ -0.43
UBL3-201ENST00000380680 A0A096LNI7 61 aa12.34□□□□□ -0.43
UBL3-201ENST00000380680 Q8N814 137 aa12.34□□□□□ -0.43
UBL3-201ENST00000380680 GCN1Q92616 2671 aaKnown RBP12.34□□□□□ -0.43
UBL3-201ENST00000380680 PRO0461Q9UI25 63 aa12.33□□□□□ -0.44
UBL3-201ENST00000380680 BPY2O14599 106 aa12.33□□□□□ -0.44
UBL3-201ENST00000380680 SMIM20Q8N5G0 67 aa12.33□□□□□ -0.44
UBL3-201ENST00000380680 FAM240AA0A1B0GVK7 77 aa12.32□□□□□ -0.44
UBL3-201ENST00000380680 Q8N3U1 123 aa12.32□□□□□ -0.44
UBL3-201ENST00000380680 IL17DQ8TAD2 202 aa12.32□□□□□ -0.44
UBL3-201ENST00000380680 CSNK1G2-AS1Q8NCQ2 148 aa12.3□□□□□ -0.44
UBL3-201ENST00000380680 UBR5O95071 2799 aaPredicted RBP12.3□□□□□ -0.44
UBL3-201ENST00000380680 NDUFC2O95298 119 aa12.3□□□□□ -0.44
UBL3-201ENST00000380680 LINC01561Q8N1V8 128 aa12.3□□□□□ -0.44
UBL3-201ENST00000380680 GIG44P09565 113 aaPredicted RBP12.3□□□□□ -0.44
UBL3-201ENST00000380680 IMUPQ9GZP8 106 aa12.29□□□□□ -0.44
UBL3-201ENST00000380680 M0R2N4 97 aa12.29□□□□□ -0.44
UBL3-201ENST00000380680 SBSPONQ8IVN8 264 aa12.29□□□□□ -0.44
UBL3-201ENST00000380680 C3orf84H3BNL1 204 aa12.28□□□□□ -0.44
UBL3-201ENST00000380680 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.28□□□□□ -0.44
UBL3-201ENST00000380680 C19orf73Q9NVV2 129 aa12.28□□□□□ -0.44
UBL3-201ENST00000380680 USP17L23D6RBM5 183 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms