RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 PRR4Q16378 134 aa11.49□□□□□ -0.57
COL2A1-202ENST00000380518 ADAMTSL4-AS1Q5T5F5 129 aa11.49□□□□□ -0.57
COL2A1-202ENST00000380518 EML5Q05BV3 1969 aa11.49□□□□□ -0.57
COL2A1-202ENST00000380518 IGLV9-49A0A0B4J1Y8 123 aa11.49□□□□□ -0.57
COL2A1-202ENST00000380518 PLA2G2AP14555 144 aa11.49□□□□□ -0.57
COL2A1-202ENST00000380518 PKD1L2Q7Z442 2459 aa11.49□□□□□ -0.57
COL2A1-202ENST00000380518 ANKRD11Q6UB99 2663 aaPredicted RBP11.48□□□□□ -0.57
COL2A1-202ENST00000380518 M0QXV9 152 aa11.47□□□□□ -0.57
COL2A1-202ENST00000380518 SMR3AQ99954 134 aa11.47□□□□□ -0.57
COL2A1-202ENST00000380518 C1orf137Q5JT78 98 aa11.46□□□□□ -0.57
COL2A1-202ENST00000380518 A0A0U1RQV1 116 aa11.46□□□□□ -0.57
COL2A1-202ENST00000380518 C10orf25Q5T742 122 aa11.46□□□□□ -0.58
COL2A1-202ENST00000380518 TRAV7A0A075B6U4 112 aa11.46□□□□□ -0.58
COL2A1-202ENST00000380518 PRR3P79522 188 aaKnown RBP11.45□□□□□ -0.58
COL2A1-202ENST00000380518 LY6G6CO95867 125 aa11.45□□□□□ -0.58
COL2A1-202ENST00000380518 C16orf95Q9H693 158 aa11.45□□□□□ -0.58
COL2A1-202ENST00000380518 FAM30AQ9NZY2 134 aa11.45□□□□□ -0.58
COL2A1-202ENST00000380518 A0A087WYN8 130 aa11.45□□□□□ -0.58
COL2A1-202ENST00000380518 C6orf223Q8N319 242 aa11.44□□□□□ -0.58
COL2A1-202ENST00000380518 RETNQ9HD89 108 aa11.44□□□□□ -0.58
COL2A1-202ENST00000380518 A0A1B0GUV1 79 aa11.44□□□□□ -0.58
COL2A1-202ENST00000380518 PTPRSQ13332 1948 aa11.44□□□□□ -0.58
COL2A1-202ENST00000380518 CELA1Q9UNI1 258 aa11.44□□□□□ -0.58
COL2A1-202ENST00000380518 Q6ZSN1 163 aa11.43□□□□□ -0.58
COL2A1-202ENST00000380518 Q6ZTC4 211 aa11.43□□□□□ -0.58
COL2A1-202ENST00000380518 A6NED7 52 aa11.43□□□□□ -0.58
COL2A1-202ENST00000380518 LRRK2Q5S007 2527 aa11.43□□□□□ -0.58
COL2A1-202ENST00000380518 CHD8Q9HCK8 2581 aa11.42□□□□□ -0.58
COL2A1-202ENST00000380518 REG3GQ6UW15 175 aa11.42□□□□□ -0.58
COL2A1-202ENST00000380518 A0A087WVE0 104 aa11.41□□□□□ -0.58
COL2A1-202ENST00000380518 SMIM26A0A096LP01 95 aa11.4□□□□□ -0.58
COL2A1-202ENST00000380518 F8WDY8 70 aa11.4□□□□□ -0.58
COL2A1-202ENST00000380518 SERP1Q9Y6X1 66 aa11.4□□□□□ -0.58
COL2A1-202ENST00000380518 NUPR2A6NF83 97 aa11.4□□□□□ -0.59
COL2A1-202ENST00000380518 LINC01561Q8N1V8 128 aa11.38□□□□□ -0.59
COL2A1-202ENST00000380518 C2orf48Q96LS8 159 aa11.38□□□□□ -0.59
COL2A1-202ENST00000380518 KIF25-AS1Q9Y6Z4 181 aa11.38□□□□□ -0.59
COL2A1-202ENST00000380518 LINC00208Q96KT6 92 aa11.37□□□□□ -0.59
COL2A1-202ENST00000380518 Q8N3U1 123 aa11.36□□□□□ -0.59
COL2A1-202ENST00000380518 RAI1Q7Z5J4 1906 aaPredicted RBP11.35□□□□□ -0.59
COL2A1-202ENST00000380518 LYPD5Q6UWN5 251 aa11.34□□□□□ -0.59
COL2A1-202ENST00000380518 ESRGQ1W209 222 aa11.34□□□□□ -0.59
COL2A1-202ENST00000380518 ZNF462Q96JM2 2506 aa11.33□□□□□ -0.6
COL2A1-202ENST00000380518 MTORP42345 2549 aa11.33□□□□□ -0.6
COL2A1-202ENST00000380518 LINC00575Q6W349 94 aa11.33□□□□□ -0.6
COL2A1-202ENST00000380518 COL5A1P20908 1838 aaPredicted RBP11.33□□□□□ -0.6
COL2A1-202ENST00000380518 PRYO14603 147 aa11.32□□□□□ -0.6
COL2A1-202ENST00000380518 CPAMD8Q8IZJ3 1885 aa11.32□□□□□ -0.6
COL2A1-202ENST00000380518 EXPH5Q8NEV8 1989 aa11.32□□□□□ -0.6
COL2A1-202ENST00000380518 LINC01547P58512 204 aaPredicted RBP11.32□□□□□ -0.6
COL2A1-202ENST00000380518 AGRNO00468 2067 aa11.31□□□□□ -0.6
COL2A1-202ENST00000380518 LINC00337Q8N6G1 96 aa11.31□□□□□ -0.6
COL2A1-202ENST00000380518 Q9BRP9 147 aa11.3□□□□□ -0.6
COL2A1-202ENST00000380518 C11orf72Q8NBR9 251 aa11.3□□□□□ -0.6
COL2A1-202ENST00000380518 CIRBP-AS1Q8TBR5 109 aa11.3□□□□□ -0.6
COL2A1-202ENST00000380518 SPTBN4Q9H254 2564 aa11.3□□□□□ -0.6
COL2A1-202ENST00000380518 A0A087WSZ3 146 aa11.29□□□□□ -0.6
COL2A1-202ENST00000380518 IGLV5-39A0A0G2JS06 123 aa11.29□□□□□ -0.6
COL2A1-202ENST00000380518 EP400Q96L91 3159 aa11.29□□□□□ -0.6
COL2A1-202ENST00000380518 LINC01546A6NGU7 62 aa11.28□□□□□ -0.6
COL2A1-202ENST00000380518 Q6ZVQ6 151 aa11.28□□□□□ -0.6
COL2A1-202ENST00000380518 LINC00846Q9NV44 126 aa11.28□□□□□ -0.6
COL2A1-202ENST00000380518 Q6ZRU5 148 aa11.28□□□□□ -0.6
COL2A1-202ENST00000380518 IGHV6-1A0A0B4J1U7 121 aa11.27□□□□□ -0.6
COL2A1-202ENST00000380518 IGLV5-52A0A0A0MRZ9 124 aa11.27□□□□□ -0.61
COL2A1-202ENST00000380518 LINC00315P59091 139 aa11.26□□□□□ -0.61
COL2A1-202ENST00000380518 A8MTW9 85 aa11.26□□□□□ -0.61
COL2A1-202ENST00000380518 Q8N2B8 174 aa11.26□□□□□ -0.61
COL2A1-202ENST00000380518 IGHV3OR16-9A0A0B4J2B5 98 aa11.25□□□□□ -0.61
COL2A1-202ENST00000380518 LINC01556Q5JQF7 62 aa11.25□□□□□ -0.61
COL2A1-202ENST00000380518 SOSTDC1Q6X4U4 206 aa11.25□□□□□ -0.61
COL2A1-202ENST00000380518 TRBV7-7A0A0K0K1E9 115 aa11.24□□□□□ -0.61
COL2A1-202ENST00000380518 TRBV7-6A0A0J9YX20 115 aa11.23□□□□□ -0.61
COL2A1-202ENST00000380518 FAM19A4Q96LR4 140 aa11.23□□□□□ -0.61
COL2A1-202ENST00000380518 C1orf195Q5TG92 126 aa11.22□□□□□ -0.61
COL2A1-202ENST00000380518 TMEM254Q8TBM7 123 aa11.22□□□□□ -0.61
COL2A1-202ENST00000380518 ADAMTS20P59510 1910 aa11.22□□□□□ -0.61
COL2A1-202ENST00000380518 CDIP1Q9H305 208 aa11.19□□□□□ -0.62
COL2A1-202ENST00000380518 H0Y9P7 68 aa11.19□□□□□ -0.62
COL2A1-202ENST00000380518 PCOTHQ58A44 107 aa11.18□□□□□ -0.62
COL2A1-202ENST00000380518 FASNP49327 2511 aaKnown RBP11.18□□□□□ -0.62
COL2A1-202ENST00000380518 CXCL6P80162 114 aa11.18□□□□□ -0.62
COL2A1-202ENST00000380518 HCG22E2RYF7 251 aa11.18□□□□□ -0.62
COL2A1-202ENST00000380518 PRLHP81277 87 aa11.18□□□□□ -0.62
COL2A1-202ENST00000380518 C22orf24Q9Y442 160 aa11.18□□□□□ -0.62
COL2A1-202ENST00000380518 MUC4Q99102 2169 aa11.18□□□□□ -0.62
COL2A1-202ENST00000380518 DEFB116Q30KQ4 102 aa11.17□□□□□ -0.62
COL2A1-202ENST00000380518 C1orf134Q5TEV5 83 aa11.17□□□□□ -0.62
COL2A1-202ENST00000380518 CENPFP49454 3210 aa11.17□□□□□ -0.62
COL2A1-202ENST00000380518 FHL3Q13643 280 aa11.17□□□□□ -0.62
COL2A1-202ENST00000380518 IGLV5-45A0A087WSX0 123 aa11.16□□□□□ -0.62
COL2A1-202ENST00000380518 SMCR5Q8TEV8 140 aa11.15□□□□□ -0.62
COL2A1-202ENST00000380518 TET2Q6N021 2002 aaPredicted RBP11.15□□□□□ -0.62
COL2A1-202ENST00000380518 PMAIP1Q13794 54 aa11.14□□□□□ -0.63
COL2A1-202ENST00000380518 POLQO75417 2590 aa11.13□□□□□ -0.63
COL2A1-202ENST00000380518 hDV103S1A0JD37 113 aa11.13□□□□□ -0.63
COL2A1-202ENST00000380518 KIAA0087Q14695 138 aa11.12□□□□□ -0.63
COL2A1-202ENST00000380518 SPATA3Q8NHX4 192 aa11.11□□□□□ -0.63
COL2A1-202ENST00000380518 NHLRC4P0CG21 123 aaPredicted RBP11.11□□□□□ -0.63
COL2A1-202ENST00000380518 SMCPP49901 116 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 223.7 ms