RNA–Protein interactions for RNA: ENST00000378910.9

NPHS1-202, Transcript of NPHS1, nephrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHS1, Length 4,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-202ENST00000378910 PRRC2AP48634 2157 aaKnown RBP8.59□□□□□ -1.03
NPHS1-202ENST00000378910 TRBV10-1A0A0K0K1A3 114 aa8.59□□□□□ -1.03
NPHS1-202ENST00000378910 MP68P56378 58 aa8.59□□□□□ -1.03
NPHS1-202ENST00000378910 LCA10Q71F78 164 aa8.59□□□□□ -1.03
NPHS1-202ENST00000378910 CXCL6P80162 114 aa8.59□□□□□ -1.03
NPHS1-202ENST00000378910 Q6ZRU5 148 aa8.58□□□□□ -1.04
NPHS1-202ENST00000378910 ZNF580Q9UK33 172 aa8.58□□□□□ -1.04
NPHS1-202ENST00000378910 PDE6GP18545 87 aa8.57□□□□□ -1.04
NPHS1-202ENST00000378910 CENPEQ02224 2701 aa8.57□□□□□ -1.04
NPHS1-202ENST00000378910 HCG22E2RYF7 251 aa8.57□□□□□ -1.04
NPHS1-202ENST00000378910 IGLV10-54A0A075B6I4 117 aa8.56□□□□□ -1.04
NPHS1-202ENST00000378910 COL12A1Q99715 3063 aa8.56□□□□□ -1.04
NPHS1-202ENST00000378910 ATMQ13315 3056 aa8.55□□□□□ -1.04
NPHS1-202ENST00000378910 NBEAQ8NFP9 2946 aa8.55□□□□□ -1.04
NPHS1-202ENST00000378910 Q6ZTI0 123 aa8.54□□□□□ -1.04
NPHS1-202ENST00000378910 DCHS1Q96JQ0 3298 aa8.54□□□□□ -1.04
NPHS1-202ENST00000378910 GYPEP15421 78 aa8.54□□□□□ -1.04
NPHS1-202ENST00000378910 CFAP47Q6ZTR5 3102 aa8.54□□□□□ -1.04
NPHS1-202ENST00000378910 A8MUN3 132 aa8.54□□□□□ -1.04
NPHS1-202ENST00000378910 C11orf71Q6IPW1 123 aa8.54□□□□□ -1.04
NPHS1-202ENST00000378910 C16orf74Q96GX8 76 aa8.54□□□□□ -1.04
NPHS1-202ENST00000378910 MAP6D1Q9H9H5 199 aa8.54□□□□□ -1.04
NPHS1-202ENST00000378910 CCL24O00175 119 aa8.54□□□□□ -1.04
NPHS1-202ENST00000378910 C7orf65Q6ZTY9 151 aa8.54□□□□□ -1.04
NPHS1-202ENST00000378910 RAI1Q7Z5J4 1906 aaPredicted RBP8.54□□□□□ -1.04
NPHS1-202ENST00000378910 CASC2Q6XLA1 102 aa8.53□□□□□ -1.04
NPHS1-202ENST00000378910 PRM2P04554 102 aa8.53□□□□□ -1.04
NPHS1-202ENST00000378910 ABCA12Q86UK0 2595 aa8.53□□□□□ -1.04
NPHS1-202ENST00000378910 C10orf99Q6UWK7 81 aa8.52□□□□□ -1.04
NPHS1-202ENST00000378910 C1orf158Q8N1D5 194 aa8.52□□□□□ -1.04
NPHS1-202ENST00000378910 M0R378 163 aa8.52□□□□□ -1.05
NPHS1-202ENST00000378910 PRO3102Q9H379 93 aa8.52□□□□□ -1.05
NPHS1-202ENST00000378910 C6orf223Q8N319 242 aa8.52□□□□□ -1.05
NPHS1-202ENST00000378910 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.52□□□□□ -1.05
NPHS1-202ENST00000378910 LIMD2Q9BT23 127 aa8.51□□□□□ -1.05
NPHS1-202ENST00000378910 NDUFB1O75438 58 aa8.51□□□□□ -1.05
NPHS1-202ENST00000378910 TNRC18O15417 2968 aaPredicted RBP8.51□□□□□ -1.05
NPHS1-202ENST00000378910 IBA57-AS1B1ANH7 110 aa8.51□□□□□ -1.05
NPHS1-202ENST00000378910 CELA1Q9UNI1 258 aa8.51□□□□□ -1.05
NPHS1-202ENST00000378910 FN1P02751 2386 aaKnown RBP8.51□□□□□ -1.05
NPHS1-202ENST00000378910 ATP11AUNQ6ZP68 121 aa8.5□□□□□ -1.05
NPHS1-202ENST00000378910 KIF25-AS1Q9Y6Z4 181 aa8.5□□□□□ -1.05
NPHS1-202ENST00000378910 LINC01600Q96MT4 127 aa8.49□□□□□ -1.05
NPHS1-202ENST00000378910 ZNF706Q9Y5V0 76 aaPredicted RBP8.49□□□□□ -1.05
NPHS1-202ENST00000378910 SMIM11BQ8TCY0 68 aa8.49□□□□□ -1.05
NPHS1-202ENST00000378910 AMELXQ99217 191 aa8.49□□□□□ -1.05
NPHS1-202ENST00000378910 TRAV10A0A0B4J240 114 aa8.49□□□□□ -1.05
NPHS1-202ENST00000378910 LAMA5O15230 3695 aa8.49□□□□□ -1.05
NPHS1-202ENST00000378910 LINC01547P58512 204 aaPredicted RBP8.49□□□□□ -1.05
NPHS1-202ENST00000378910 LINC00242Q5T6M2 205 aa8.49□□□□□ -1.05
NPHS1-202ENST00000378910 TM2D3Q9BRN9 247 aa8.49□□□□□ -1.05
NPHS1-202ENST00000378910 ESM1Q9NQ30 184 aa8.49□□□□□ -1.05
NPHS1-202ENST00000378910 EPG5Q9HCE0 2579 aa8.48□□□□□ -1.05
NPHS1-202ENST00000378910 A0A087WYN8 130 aa8.48□□□□□ -1.05
NPHS1-202ENST00000378910 LYPD5Q6UWN5 251 aa8.48□□□□□ -1.05
NPHS1-202ENST00000378910 C8orf87E5RJ46 101 aa8.48□□□□□ -1.05
NPHS1-202ENST00000378910 FASNP49327 2511 aaKnown RBP8.47□□□□□ -1.05
NPHS1-202ENST00000378910 DMXL1Q9Y485 3027 aa8.47□□□□□ -1.05
NPHS1-202ENST00000378910 TRAV22A0A0B4J277 110 aa8.47□□□□□ -1.05
NPHS1-202ENST00000378910 DEFB105AQ8NG35 78 aa8.46□□□□□ -1.05
NPHS1-202ENST00000378910 HIGD2AQ9BW72 106 aa8.46□□□□□ -1.05
NPHS1-202ENST00000378910 ZNF462Q96JM2 2506 aa8.46□□□□□ -1.06
NPHS1-202ENST00000378910 AVPP01185 164 aa8.46□□□□□ -1.06
NPHS1-202ENST00000378910 IGLV1-40P01703 118 aa8.46□□□□□ -1.06
NPHS1-202ENST00000378910 LINC00315P59091 139 aa8.46□□□□□ -1.06
NPHS1-202ENST00000378910 SPAG11BQ08648 103 aa8.46□□□□□ -1.06
NPHS1-202ENST00000378910 HIGD2BQ4VC39 106 aa8.46□□□□□ -1.06
NPHS1-202ENST00000378910 SMIM1B2RUZ4 78 aa8.46□□□□□ -1.06
NPHS1-202ENST00000378910 PKD1L2Q7Z442 2459 aa8.45□□□□□ -1.06
NPHS1-202ENST00000378910 CHCHD7Q9BUK0 85 aa8.45□□□□□ -1.06
NPHS1-202ENST00000378910 LRRK2Q5S007 2527 aa8.45□□□□□ -1.06
NPHS1-202ENST00000378910 IGHV4-28A0A0C4DH34 117 aa8.45□□□□□ -1.06
NPHS1-202ENST00000378910 FAM30AQ9NZY2 134 aa8.45□□□□□ -1.06
NPHS1-202ENST00000378910 DIRC1Q969H9 104 aa8.45□□□□□ -1.06
NPHS1-202ENST00000378910 H3BQ85 93 aa8.44□□□□□ -1.06
NPHS1-202ENST00000378910 CCL18P55774 89 aa8.44□□□□□ -1.06
NPHS1-202ENST00000378910 DEFB114Q30KQ6 69 aa8.44□□□□□ -1.06
NPHS1-202ENST00000378910 C6orf99Q4VX62 202 aa8.44□□□□□ -1.06
NPHS1-202ENST00000378910 C16orf95Q9H693 158 aa8.44□□□□□ -1.06
NPHS1-202ENST00000378910 ZZEF1O43149 2961 aa8.44□□□□□ -1.06
NPHS1-202ENST00000378910 COX6A2Q02221 97 aa8.44□□□□□ -1.06
NPHS1-202ENST00000378910 C4orf3Q8WVX3 66 aa8.44□□□□□ -1.06
NPHS1-202ENST00000378910 MTORP42345 2549 aa8.44□□□□□ -1.06
NPHS1-202ENST00000378910 DMXL2Q8TDJ6 3036 aa8.43□□□□□ -1.06
NPHS1-202ENST00000378910 CAMK2N2Q96S95 79 aa8.43□□□□□ -1.06
NPHS1-202ENST00000378910 CDC42SE2Q9NRR3 84 aa8.43□□□□□ -1.06
NPHS1-202ENST00000378910 POLQO75417 2590 aa8.43□□□□□ -1.06
NPHS1-202ENST00000378910 Q8N2B8 174 aa8.43□□□□□ -1.06
NPHS1-202ENST00000378910 FAM218AQ96MZ4 157 aa8.43□□□□□ -1.06
NPHS1-202ENST00000378910 TRBV6-8A0A0A6YYG3 113 aa8.42□□□□□ -1.06
NPHS1-202ENST00000378910 C19orf84I3L1E1 186 aa8.42□□□□□ -1.06
NPHS1-202ENST00000378910 NTM-AS1Q6ZSK4 140 aa8.42□□□□□ -1.06
NPHS1-202ENST00000378910 PCSK5Q92824 1860 aa8.41□□□□□ -1.06
NPHS1-202ENST00000378910 RETNLBQ9BQ08 111 aa8.41□□□□□ -1.06
NPHS1-202ENST00000378910 PRO0255Q9UI72 69 aa8.41□□□□□ -1.06
NPHS1-202ENST00000378910 TRBV6-4A0A1B0GX49 114 aa8.4□□□□□ -1.07
NPHS1-202ENST00000378910 WFDC10AQ9H1F0 79 aa8.39□□□□□ -1.07
NPHS1-202ENST00000378910 KLK12Q9UKR0 248 aa8.39□□□□□ -1.07
NPHS1-202ENST00000378910 LOC100131303A0A0U1RQF7 123 aa8.39□□□□□ -1.07
NPHS1-202ENST00000378910 COX7BP24311 80 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms