RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 LINC00158P58513 81 aa13.57□□□□□ -0.24
SHROOM1-202ENST00000378676 FAM222AQ5U5X8 452 aa13.56□□□□□ -0.24
SHROOM1-202ENST00000378676 TRACP01848 142 aa13.56□□□□□ -0.24
SHROOM1-202ENST00000378676 CCL18P55774 89 aa13.56□□□□□ -0.24
SHROOM1-202ENST00000378676 TRAV13-2A0A0B4J235 113 aa13.55□□□□□ -0.24
SHROOM1-202ENST00000378676 IMUPQ9GZP8 106 aa13.55□□□□□ -0.24
SHROOM1-202ENST00000378676 C11orf68Q9H3H3 251 aaKnown RBP13.55□□□□□ -0.24
SHROOM1-202ENST00000378676 C22orf24Q9Y442 160 aa13.55□□□□□ -0.24
SHROOM1-202ENST00000378676 A0A096LPF7 62 aa13.54□□□□□ -0.24
SHROOM1-202ENST00000378676 PFN2P35080 140 aa13.54□□□□□ -0.24
SHROOM1-202ENST00000378676 RPL28P46779 137 aaKnown RBP13.54□□□□□ -0.24
SHROOM1-202ENST00000378676 CLPSL2Q6UWE3 100 aa13.54□□□□□ -0.24
SHROOM1-202ENST00000378676 IBA57-AS1B1ANH7 110 aa13.52□□□□□ -0.24
SHROOM1-202ENST00000378676 ACYP1P07311 99 aa13.52□□□□□ -0.24
SHROOM1-202ENST00000378676 XCL1P47992 114 aa13.52□□□□□ -0.24
SHROOM1-202ENST00000378676 BAALC-AS2P0C853 105 aa13.51□□□□□ -0.25
SHROOM1-202ENST00000378676 SMIM11BQ8TCY0 68 aa13.51□□□□□ -0.25
SHROOM1-202ENST00000378676 Q9HAA7 133 aa13.51□□□□□ -0.25
SHROOM1-202ENST00000378676 PRO0255Q9UI72 69 aa13.5□□□□□ -0.25
SHROOM1-202ENST00000378676 DEFB4AO15263 64 aa13.49□□□□□ -0.25
SHROOM1-202ENST00000378676 A0A1B0GUV1 79 aa13.48□□□□□ -0.25
SHROOM1-202ENST00000378676 SS18Q15532 418 aa13.47□□□□□ -0.25
SHROOM1-202ENST00000378676 A0A087WYN8 130 aa13.47□□□□□ -0.25
SHROOM1-202ENST00000378676 SMIM9A6NGZ8 99 aa13.47□□□□□ -0.25
SHROOM1-202ENST00000378676 C6orf226Q5I0X4 101 aa13.47□□□□□ -0.25
SHROOM1-202ENST00000378676 DEFB135Q30KP9 77 aa13.46□□□□□ -0.25
SHROOM1-202ENST00000378676 PAX4O43316 350 aa13.46□□□□□ -0.25
SHROOM1-202ENST00000378676 Q8N3U1 123 aa13.46□□□□□ -0.25
SHROOM1-202ENST00000378676 TENM1Q9UKZ4 2725 aa13.46□□□□□ -0.25
SHROOM1-202ENST00000378676 FAM236AA0A1B0GUQ0 79 aa13.45□□□□□ -0.26
SHROOM1-202ENST00000378676 FAM236BA0A1B0GV22 79 aa13.45□□□□□ -0.26
SHROOM1-202ENST00000378676 HIVEP1P15822 2718 aa13.45□□□□□ -0.26
SHROOM1-202ENST00000378676 INAFM1C9JVW0 142 aa13.44□□□□□ -0.26
SHROOM1-202ENST00000378676 ATP5G1P05496 136 aa13.44□□□□□ -0.26
SHROOM1-202ENST00000378676 Q8IZM0 81 aa13.44□□□□□ -0.26
SHROOM1-202ENST00000378676 SMCR5Q8TEV8 140 aa13.44□□□□□ -0.26
SHROOM1-202ENST00000378676 FLNBO75369 2602 aaKnown RBP13.43□□□□□ -0.26
SHROOM1-202ENST00000378676 C3orf22Q8N5N4 141 aa13.43□□□□□ -0.26
SHROOM1-202ENST00000378676 NSD1Q96L73 2696 aaPredicted RBP13.43□□□□□ -0.26
SHROOM1-202ENST00000378676 LYRM9A8MSI8 78 aa13.43□□□□□ -0.26
SHROOM1-202ENST00000378676 MALP21145 153 aa13.43□□□□□ -0.26
SHROOM1-202ENST00000378676 C9orf66Q5T8R8 295 aa13.43□□□□□ -0.26
SHROOM1-202ENST00000378676 LINC00643Q86TS7 51 aa13.42□□□□□ -0.26
SHROOM1-202ENST00000378676 LINC00269Q8N2A0 174 aa13.42□□□□□ -0.26
SHROOM1-202ENST00000378676 UQCRQO14949 82 aa13.41□□□□□ -0.26
SHROOM1-202ENST00000378676 IGHV4-28A0A0C4DH34 117 aa13.4□□□□□ -0.26
SHROOM1-202ENST00000378676 C9orf153Q5TBE3 101 aa13.4□□□□□ -0.26
SHROOM1-202ENST00000378676 OR13C6PQ8NH95 151 aa13.4□□□□□ -0.26
SHROOM1-202ENST00000378676 C9orf129Q5T035 196 aaKnown RBP13.39□□□□□ -0.27
SHROOM1-202ENST00000378676 C3orf56Q8N813 242 aa13.39□□□□□ -0.27
SHROOM1-202ENST00000378676 CELA1Q9UNI1 258 aa13.39□□□□□ -0.27
SHROOM1-202ENST00000378676 IGLV10-54A0A075B6I4 117 aa13.39□□□□□ -0.27
SHROOM1-202ENST00000378676 DNAL4O96015 105 aa13.38□□□□□ -0.27
SHROOM1-202ENST00000378676 KIAA0087Q14695 138 aa13.38□□□□□ -0.27
SHROOM1-202ENST00000378676 SDIM1Q6ZPB5 146 aa13.38□□□□□ -0.27
SHROOM1-202ENST00000378676 LINC00526Q96FQ7 95 aa13.38□□□□□ -0.27
SHROOM1-202ENST00000378676 LINC01561Q8N1V8 128 aa13.38□□□□□ -0.27
SHROOM1-202ENST00000378676 H0YGX0 51 aa13.37□□□□□ -0.27
SHROOM1-202ENST00000378676 LECT2O14960 151 aa13.37□□□□□ -0.27
SHROOM1-202ENST00000378676 CXCL5P42830 114 aa13.37□□□□□ -0.27
SHROOM1-202ENST00000378676 CHCHD10Q8WYQ3 142 aaPredicted RBP13.37□□□□□ -0.27
SHROOM1-202ENST00000378676 ANGP03950 147 aaKnown RBP13.36□□□□□ -0.27
SHROOM1-202ENST00000378676 DAD1P61803 113 aa13.36□□□□□ -0.27
SHROOM1-202ENST00000378676 CD164L2Q6UWJ8 174 aa13.36□□□□□ -0.27
SHROOM1-202ENST00000378676 INAFM2P0DMQ5 153 aa13.35□□□□□ -0.27
SHROOM1-202ENST00000378676 PRR3P79522 188 aaKnown RBP13.35□□□□□ -0.27
SHROOM1-202ENST00000378676 REG3AQ06141 175 aa13.35□□□□□ -0.27
SHROOM1-202ENST00000378676 GAGE2AQ6NT46 116 aa13.35□□□□□ -0.27
SHROOM1-202ENST00000378676 Q8NAQ8 132 aa13.35□□□□□ -0.27
SHROOM1-202ENST00000378676 APOC4P55056 127 aa13.34□□□□□ -0.27
SHROOM1-202ENST00000378676 A0A1B0GX51 115 aa13.34□□□□□ -0.27
SHROOM1-202ENST00000378676 SLPIP03973 132 aa13.33□□□□□ -0.28
SHROOM1-202ENST00000378676 NANOS2P60321 138 aaKnown RBP13.33□□□□□ -0.28
SHROOM1-202ENST00000378676 C9orf116Q5BN46 136 aaPredicted RBP13.33□□□□□ -0.28
SHROOM1-202ENST00000378676 C14orf132Q9NPU4 83 aa13.31□□□□□ -0.28
SHROOM1-202ENST00000378676 J3KT08 172 aa13.3□□□□□ -0.28
SHROOM1-202ENST00000378676 HTN3P15516 51 aa13.3□□□□□ -0.28
SHROOM1-202ENST00000378676 COX7CP15954 63 aa13.3□□□□□ -0.28
SHROOM1-202ENST00000378676 Q8NDZ9 215 aa13.3□□□□□ -0.28
SHROOM1-202ENST00000378676 ATRQ13535 2644 aa13.3□□□□□ -0.28
SHROOM1-202ENST00000378676 F8P00451 2351 aa13.29□□□□□ -0.28
SHROOM1-202ENST00000378676 OBSCN-AS1Q96MR7 158 aa13.29□□□□□ -0.28
SHROOM1-202ENST00000378676 TEP1Q99973 2627 aaKnown RBP13.29□□□□□ -0.28
SHROOM1-202ENST00000378676 C5orf47Q569G3 176 aa13.28□□□□□ -0.28
SHROOM1-202ENST00000378676 CRYGAP11844 174 aa13.28□□□□□ -0.28
SHROOM1-202ENST00000378676 MIFP14174 115 aa13.28□□□□□ -0.28
SHROOM1-202ENST00000378676 NCR3O14931 201 aa13.27□□□□□ -0.29
SHROOM1-202ENST00000378676 RPS28P62857 69 aaKnown RBP13.27□□□□□ -0.29
SHROOM1-202ENST00000378676 COX17Q14061 63 aa13.27□□□□□ -0.29
SHROOM1-202ENST00000378676 NDUFC2O95298 119 aa13.26□□□□□ -0.29
SHROOM1-202ENST00000378676 HIST1H4AP62805 103 aaKnown RBP13.26□□□□□ -0.29
SHROOM1-202ENST00000378676 C6orf223Q8N319 242 aa13.26□□□□□ -0.29
SHROOM1-202ENST00000378676 TRRAPQ9Y4A5 3859 aa13.26□□□□□ -0.29
SHROOM1-202ENST00000378676 BAHCC1Q9P281 2608 aa13.26□□□□□ -0.29
SHROOM1-202ENST00000378676 C10orf25Q5T742 122 aa13.25□□□□□ -0.29
SHROOM1-202ENST00000378676 ATOX1O00244 68 aa13.25□□□□□ -0.29
SHROOM1-202ENST00000378676 C2orf48Q96LS8 159 aa13.25□□□□□ -0.29
SHROOM1-202ENST00000378676 SPART-AS1P0CW21 52 aa13.24□□□□□ -0.29
SHROOM1-202ENST00000378676 LELP1Q5T871 98 aa13.24□□□□□ -0.29
SHROOM1-202ENST00000378676 ORMDL1Q9P0S3 153 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms