RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 H7BZZ5 65 aa7.9□□□□□ -1.14
PCDHGA1-201ENST00000378105 I3L3M4 83 aa7.9□□□□□ -1.14
PCDHGA1-201ENST00000378105 FAM222AQ5U5X8 452 aa7.9□□□□□ -1.14
PCDHGA1-201ENST00000378105 MDFIQ99750 246 aa7.9□□□□□ -1.14
PCDHGA1-201ENST00000378105 C14orf132Q9NPU4 83 aa7.9□□□□□ -1.14
PCDHGA1-201ENST00000378105 VCYO14598 125 aa7.9□□□□□ -1.14
PCDHGA1-201ENST00000378105 CXCL5P42830 114 aa7.9□□□□□ -1.14
PCDHGA1-201ENST00000378105 TMEM223A0PJW6 202 aa7.9□□□□□ -1.15
PCDHGA1-201ENST00000378105 SDHAF1A6NFY7 115 aa7.9□□□□□ -1.15
PCDHGA1-201ENST00000378105 WFDC10AQ9H1F0 79 aa7.9□□□□□ -1.15
PCDHGA1-201ENST00000378105 DNAH9Q9NYC9 4486 aa7.89□□□□□ -1.15
PCDHGA1-201ENST00000378105 UNC79Q9P2D8 2635 aa7.89□□□□□ -1.15
PCDHGA1-201ENST00000378105 PLAC8L1A1L4L8 177 aa7.89□□□□□ -1.15
PCDHGA1-201ENST00000378105 DEFB114Q30KQ6 69 aa7.89□□□□□ -1.15
PCDHGA1-201ENST00000378105 ZNF580Q9UK33 172 aa7.89□□□□□ -1.15
PCDHGA1-201ENST00000378105 COL7A1Q02388 2944 aa7.89□□□□□ -1.15
PCDHGA1-201ENST00000378105 MAP6D1Q9H9H5 199 aa7.89□□□□□ -1.15
PCDHGA1-201ENST00000378105 A0A0J9YX75 114 aa7.88□□□□□ -1.15
PCDHGA1-201ENST00000378105 CRPP02741 224 aa7.88□□□□□ -1.15
PCDHGA1-201ENST00000378105 RPL28P46779 137 aaKnown RBP7.88□□□□□ -1.15
PCDHGA1-201ENST00000378105 BAHCC1Q9P281 2608 aa7.87□□□□□ -1.15
PCDHGA1-201ENST00000378105 LINC00846Q9NV44 126 aa7.87□□□□□ -1.15
PCDHGA1-201ENST00000378105 U3KQK5 164 aa7.87□□□□□ -1.15
PCDHGA1-201ENST00000378105 LENEPQ9Y5L5 61 aa7.87□□□□□ -1.15
PCDHGA1-201ENST00000378105 HUWE1Q7Z6Z7 4374 aaKnown RBP7.87□□□□□ -1.15
PCDHGA1-201ENST00000378105 IGLV1-40P01703 118 aa7.87□□□□□ -1.15
PCDHGA1-201ENST00000378105 RNASE13Q5GAN3 156 aaKnown RBP7.87□□□□□ -1.15
PCDHGA1-201ENST00000378105 SMAD5-AS1Q9Y6J3 95 aa7.87□□□□□ -1.15
PCDHGA1-201ENST00000378105 K7EQG2 157 aa7.86□□□□□ -1.15
PCDHGA1-201ENST00000378105 RNF185Q96GF1 192 aa7.86□□□□□ -1.15
PCDHGA1-201ENST00000378105 ENHOQ6UWT2 76 aa7.86□□□□□ -1.15
PCDHGA1-201ENST00000378105 C9orf47Q6ZRZ4 202 aa7.86□□□□□ -1.15
PCDHGA1-201ENST00000378105 LST1O00453 97 aa7.85□□□□□ -1.15
PCDHGA1-201ENST00000378105 TRBV30A0A0K0K1B3 111 aa7.85□□□□□ -1.15
PCDHGA1-201ENST00000378105 PRM2P04554 102 aa7.85□□□□□ -1.15
PCDHGA1-201ENST00000378105 CLPSL2Q6UWE3 100 aa7.85□□□□□ -1.15
PCDHGA1-201ENST00000378105 C2orf66Q6UXQ4 117 aa7.85□□□□□ -1.15
PCDHGA1-201ENST00000378105 RPL39LQ96EH5 51 aaKnown RBP7.85□□□□□ -1.15
PCDHGA1-201ENST00000378105 STAB1Q9NY15 2570 aa7.85□□□□□ -1.15
PCDHGA1-201ENST00000378105 PRR26Q8N8Z3 221 aa7.84□□□□□ -1.15
PCDHGA1-201ENST00000378105 IGLV2-11P01706 119 aa7.83□□□□□ -1.16
PCDHGA1-201ENST00000378105 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.83□□□□□ -1.16
PCDHGA1-201ENST00000378105 SPANXDQ9BXN6 97 aa7.83□□□□□ -1.16
PCDHGA1-201ENST00000378105 C9orf129Q5T035 196 aaKnown RBP7.82□□□□□ -1.16
PCDHGA1-201ENST00000378105 OPRPNQ99935 248 aaPredicted RBP7.82□□□□□ -1.16
PCDHGA1-201ENST00000378105 C8orf87E5RJ46 101 aa7.82□□□□□ -1.16
PCDHGA1-201ENST00000378105 SMIM2Q9BVW6 85 aa7.82□□□□□ -1.16
PCDHGA1-201ENST00000378105 F8W735 103 aaPredicted RBP7.81□□□□□ -1.16
PCDHGA1-201ENST00000378105 MRGPRG-AS1Q2M3A8 158 aa7.81□□□□□ -1.16
PCDHGA1-201ENST00000378105 COL6A5A8TX70 2615 aa7.81□□□□□ -1.16
PCDHGA1-201ENST00000378105 TMEM256-PLSCR3K7ERE1 68 aa7.81□□□□□ -1.16
PCDHGA1-201ENST00000378105 RPL39P62891 51 aaKnown RBP7.81□□□□□ -1.16
PCDHGA1-201ENST00000378105 LINC01559Q495D7 138 aa7.81□□□□□ -1.16
PCDHGA1-201ENST00000378105 PRR15Q8IV56 129 aa7.8□□□□□ -1.16
PCDHGA1-201ENST00000378105 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.8□□□□□ -1.16
PCDHGA1-201ENST00000378105 IGKV2-29A2NJV5 120 aaPredicted RBP7.8□□□□□ -1.16
PCDHGA1-201ENST00000378105 NANOS2P60321 138 aaKnown RBP7.8□□□□□ -1.16
PCDHGA1-201ENST00000378105 Q6ZRU5 148 aa7.8□□□□□ -1.16
PCDHGA1-201ENST00000378105 UBE2D4Q9Y2X8 147 aa7.8□□□□□ -1.16
PCDHGA1-201ENST00000378105 SPART-AS1P0CW21 52 aa7.8□□□□□ -1.16
PCDHGA1-201ENST00000378105 GYPEP15421 78 aa7.8□□□□□ -1.16
PCDHGA1-201ENST00000378105 PSCAO43653 123 aa7.79□□□□□ -1.16
PCDHGA1-201ENST00000378105 KRTAP1-3Q8IUG1 177 aa7.79□□□□□ -1.16
PCDHGA1-201ENST00000378105 SUMO4Q6EEV6 95 aa7.79□□□□□ -1.16
PCDHGA1-201ENST00000378105 Q6ZTI0 123 aa7.79□□□□□ -1.16
PCDHGA1-201ENST00000378105 ANGP03950 147 aaKnown RBP7.79□□□□□ -1.16
PCDHGA1-201ENST00000378105 C16orf74Q96GX8 76 aa7.78□□□□□ -1.16
PCDHGA1-201ENST00000378105 CYSRT1A8MQ03 144 aa7.78□□□□□ -1.16
PCDHGA1-201ENST00000378105 ZFAND2AQ8N6M9 145 aa7.78□□□□□ -1.16
PCDHGA1-201ENST00000378105 IGLV2-18A0A075B6J9 118 aa7.77□□□□□ -1.17
PCDHGA1-201ENST00000378105 EPM2AB3EWF7 344 aa7.77□□□□□ -1.17
PCDHGA1-201ENST00000378105 NCR3O14931 201 aa7.77□□□□□ -1.17
PCDHGA1-201ENST00000378105 DNAH6Q9C0G6 4158 aa7.77□□□□□ -1.17
PCDHGA1-201ENST00000378105 LINC00158P58513 81 aa7.77□□□□□ -1.17
PCDHGA1-201ENST00000378105 DNAH2Q9P225 4427 aa7.77□□□□□ -1.17
PCDHGA1-201ENST00000378105 PRR9Q5T870 116 aa7.76□□□□□ -1.17
PCDHGA1-201ENST00000378105 MUC4Q99102 2169 aa7.76□□□□□ -1.17
PCDHGA1-201ENST00000378105 IGLV10-54A0A075B6I4 117 aa7.76□□□□□ -1.17
PCDHGA1-201ENST00000378105 COPS9Q8WXC6 57 aa7.75□□□□□ -1.17
PCDHGA1-201ENST00000378105 FAM19A3Q7Z5A8 133 aa7.75□□□□□ -1.17
PCDHGA1-201ENST00000378105 ODF3L2Q3SX64 289 aa7.74□□□□□ -1.17
PCDHGA1-201ENST00000378105 Q8N2B8 174 aa7.74□□□□□ -1.17
PCDHGA1-201ENST00000378105 STARD9Q9P2P6 4700 aa7.74□□□□□ -1.17
PCDHGA1-201ENST00000378105 PRR4Q16378 134 aa7.74□□□□□ -1.17
PCDHGA1-201ENST00000378105 IGLV4-69A0A075B6H9 119 aa7.74□□□□□ -1.17
PCDHGA1-201ENST00000378105 C11orf21Q9P2W6 132 aa7.74□□□□□ -1.17
PCDHGA1-201ENST00000378105 A0A096LNT2 108 aa7.73□□□□□ -1.17
PCDHGA1-201ENST00000378105 TRAV10A0A0B4J240 114 aa7.73□□□□□ -1.17
PCDHGA1-201ENST00000378105 A0A0J9YXY3 114 aa7.73□□□□□ -1.17
PCDHGA1-201ENST00000378105 M0R378 163 aa7.73□□□□□ -1.17
PCDHGA1-201ENST00000378105 SLPIP03973 132 aa7.73□□□□□ -1.17
PCDHGA1-201ENST00000378105 FUSP35637 526 aaKnown RBP eCLIP7.73□□□□□ -1.17
PCDHGA1-201ENST00000378105 PROK1P58294 105 aa7.73□□□□□ -1.17
PCDHGA1-201ENST00000378105 KTN1-AS1Q86SY8 53 aa7.73□□□□□ -1.17
PCDHGA1-201ENST00000378105 IGHV3-30-3P0DP02 117 aa7.73□□□□□ -1.17
PCDHGA1-201ENST00000378105 Q6JHZ5 121 aa7.73□□□□□ -1.17
PCDHGA1-201ENST00000378105 FAM218AQ96MZ4 157 aa7.73□□□□□ -1.17
PCDHGA1-201ENST00000378105 K7EQD1 137 aa7.72□□□□□ -1.17
PCDHGA1-201ENST00000378105 AMELXQ99217 191 aa7.72□□□□□ -1.17
PCDHGA1-201ENST00000378105 ESRGQ1W209 222 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms