RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 A8MZ25 164 aa7.78□□□□□ -1.16
RTN3-206ENST00000377819 CCDC179H3BU77 68 aa7.78□□□□□ -1.16
RTN3-206ENST00000377819 LINC00694P0DN24 101 aa7.78□□□□□ -1.16
RTN3-206ENST00000377819 ATP11AUNQ6ZP68 121 aa7.78□□□□□ -1.16
RTN3-206ENST00000377819 NCOA6Q14686 2063 aaPredicted RBP7.78□□□□□ -1.16
RTN3-206ENST00000377819 MAPKAPK5-AS1Q8N8E1 139 aa7.77□□□□□ -1.17
RTN3-206ENST00000377819 PROK1P58294 105 aa7.77□□□□□ -1.17
RTN3-206ENST00000377819 LINC01006Q8NI28 216 aa7.77□□□□□ -1.17
RTN3-206ENST00000377819 FRMD6-AS1P0C7T7 363 aa7.77□□□□□ -1.17
RTN3-206ENST00000377819 C1orf64Q8NEQ6 169 aa7.77□□□□□ -1.17
RTN3-206ENST00000377819 LAMA2P24043 3122 aaKnown RBP7.76□□□□□ -1.17
RTN3-206ENST00000377819 OXLD1Q5BKU9 147 aa7.76□□□□□ -1.17
RTN3-206ENST00000377819 LY6G6DO95868 133 aa7.76□□□□□ -1.17
RTN3-206ENST00000377819 COX6A2Q02221 97 aa7.75□□□□□ -1.17
RTN3-206ENST00000377819 C2orf16Q68DN1 1984 aa7.75□□□□□ -1.17
RTN3-206ENST00000377819 CXCL6P80162 114 aa7.75□□□□□ -1.17
RTN3-206ENST00000377819 Q8N814 137 aa7.75□□□□□ -1.17
RTN3-206ENST00000377819 CRIP2P52943 208 aaPredicted RBP7.75□□□□□ -1.17
RTN3-206ENST00000377819 CDC42SE2Q9NRR3 84 aa7.74□□□□□ -1.17
RTN3-206ENST00000377819 C8orf87E5RJ46 101 aa7.73□□□□□ -1.17
RTN3-206ENST00000377819 F8WDY8 70 aa7.73□□□□□ -1.17
RTN3-206ENST00000377819 TSHBP01222 138 aa7.73□□□□□ -1.17
RTN3-206ENST00000377819 PSMG3-AS1Q96PY0 264 aa7.73□□□□□ -1.17
RTN3-206ENST00000377819 A0A087WVE0 104 aa7.73□□□□□ -1.17
RTN3-206ENST00000377819 SPACA4Q8TDM5 124 aa7.73□□□□□ -1.17
RTN3-206ENST00000377819 FASNP49327 2511 aaKnown RBP7.73□□□□□ -1.17
RTN3-206ENST00000377819 Q8N6K4 173 aa7.73□□□□□ -1.17
RTN3-206ENST00000377819 DSCAMO60469 2012 aa7.72□□□□□ -1.17
RTN3-206ENST00000377819 XGP55808 180 aa7.72□□□□□ -1.17
RTN3-206ENST00000377819 TP53AIP1Q9HCN2 124 aa7.72□□□□□ -1.17
RTN3-206ENST00000377819 CDH23Q9H251 3354 aa7.72□□□□□ -1.17
RTN3-206ENST00000377819 Q6ZTC4 211 aa7.72□□□□□ -1.17
RTN3-206ENST00000377819 POLR2KP53803 58 aaKnown RBP7.71□□□□□ -1.17
RTN3-206ENST00000377819 DEFB116Q30KQ4 102 aa7.71□□□□□ -1.18
RTN3-206ENST00000377819 XIRP2A4UGR9 3374 aa7.71□□□□□ -1.18
RTN3-206ENST00000377819 EIF4EBP1Q13541 118 aaPredicted RBP7.7□□□□□ -1.18
RTN3-206ENST00000377819 COX6B2Q6YFQ2 88 aa7.7□□□□□ -1.18
RTN3-206ENST00000377819 KMT2EQ8IZD2 1858 aa7.7□□□□□ -1.18
RTN3-206ENST00000377819 FAM229AH3BQW9 127 aa7.7□□□□□ -1.18
RTN3-206ENST00000377819 CRIPTQ9P021 101 aa7.7□□□□□ -1.18
RTN3-206ENST00000377819 PIEZO2Q9H5I5 2752 aa7.7□□□□□ -1.18
RTN3-206ENST00000377819 GDF5OSQ5U4N7 250 aa7.69□□□□□ -1.18
RTN3-206ENST00000377819 SSBP3-AS1Q7Z2R9 100 aa7.69□□□□□ -1.18
RTN3-206ENST00000377819 U3KQK5 164 aa7.69□□□□□ -1.18
RTN3-206ENST00000377819 EPG5Q9HCE0 2579 aa7.68□□□□□ -1.18
RTN3-206ENST00000377819 IGF2RP11717 2491 aa7.68□□□□□ -1.18
RTN3-206ENST00000377819 LINC00242Q5T6M2 205 aa7.68□□□□□ -1.18
RTN3-206ENST00000377819 NCKAP5O14513 1909 aa7.68□□□□□ -1.18
RTN3-206ENST00000377819 C10orf142B7Z368 130 aa7.68□□□□□ -1.18
RTN3-206ENST00000377819 LRP4O75096 1905 aa7.67□□□□□ -1.18
RTN3-206ENST00000377819 C9orf116Q5BN46 136 aaPredicted RBP7.67□□□□□ -1.18
RTN3-206ENST00000377819 PLXND1Q9Y4D7 1925 aa7.67□□□□□ -1.18
RTN3-206ENST00000377819 EDN2P20800 178 aa7.67□□□□□ -1.18
RTN3-206ENST00000377819 KLLNB2CW77 178 aa7.66□□□□□ -1.18
RTN3-206ENST00000377819 FSTL3O95633 263 aa7.66□□□□□ -1.18
RTN3-206ENST00000377819 C6orf48Q9UBA6 75 aa7.66□□□□□ -1.18
RTN3-206ENST00000377819 C10orf99Q6UWK7 81 aa7.66□□□□□ -1.18
RTN3-206ENST00000377819 TCF20Q9UGU0 1960 aaKnown RBP7.65□□□□□ -1.18
RTN3-206ENST00000377819 PLA2G5P39877 138 aa7.65□□□□□ -1.18
RTN3-206ENST00000377819 Q6ZS46 218 aa7.65□□□□□ -1.18
RTN3-206ENST00000377819 SMCR5Q8TEV8 140 aa7.65□□□□□ -1.18
RTN3-206ENST00000377819 LINC00574Q9H8X3 128 aa7.65□□□□□ -1.18
RTN3-206ENST00000377819 PRO0628Q9UI54 55 aa7.65□□□□□ -1.18
RTN3-206ENST00000377819 NHLRC4P0CG21 123 aaPredicted RBP7.64□□□□□ -1.19
RTN3-206ENST00000377819 SZT2Q5T011 3432 aa7.64□□□□□ -1.19
RTN3-206ENST00000377819 LAMA3Q16787 3333 aa7.64□□□□□ -1.19
RTN3-206ENST00000377819 ARHGAP21Q5T5U3 1957 aa7.64□□□□□ -1.19
RTN3-206ENST00000377819 J3QL48 77 aa7.64□□□□□ -1.19
RTN3-206ENST00000377819 KRTAP27-1Q3LI81 207 aa7.64□□□□□ -1.19
RTN3-206ENST00000377819 SMIM1B2RUZ4 78 aa7.63□□□□□ -1.19
RTN3-206ENST00000377819 C19orf84I3L1E1 186 aa7.63□□□□□ -1.19
RTN3-206ENST00000377819 BRI3O95415 125 aa7.63□□□□□ -1.19
RTN3-206ENST00000377819 IGLV8-61A0A075B6I0 122 aa7.62□□□□□ -1.19
RTN3-206ENST00000377819 CRIP1P50238 77 aa7.62□□□□□ -1.19
RTN3-206ENST00000377819 PRR3P79522 188 aaKnown RBP7.62□□□□□ -1.19
RTN3-206ENST00000377819 Q9UF83 564 aa7.62□□□□□ -1.19
RTN3-206ENST00000377819 Q8NA96 180 aa7.62□□□□□ -1.19
RTN3-206ENST00000377819 H3BPC8 53 aa7.6□□□□□ -1.19
RTN3-206ENST00000377819 LINC01600Q96MT4 127 aa7.6□□□□□ -1.19
RTN3-206ENST00000377819 PRORYQ9H606 182 aa7.6□□□□□ -1.19
RTN3-206ENST00000377819 LUZP6Q538Z0 58 aa7.59□□□□□ -1.19
RTN3-206ENST00000377819 MOBPQ13875 183 aa7.59□□□□□ -1.19
RTN3-206ENST00000377819 USP24Q9UPU5 2620 aa7.59□□□□□ -1.19
RTN3-206ENST00000377819 EYSQ5T1H1 3165 aa7.59□□□□□ -1.19
RTN3-206ENST00000377819 FHL2Q14192 279 aa7.59□□□□□ -1.2
RTN3-206ENST00000377819 ODF3L2Q3SX64 289 aa7.59□□□□□ -1.2
RTN3-206ENST00000377819 A0A087WYN8 130 aa7.58□□□□□ -1.2
RTN3-206ENST00000377819 PRM2P04554 102 aa7.58□□□□□ -1.2
RTN3-206ENST00000377819 IGIPA6NJ69 53 aa7.58□□□□□ -1.2
RTN3-206ENST00000377819 C22orf24Q9Y442 160 aa7.58□□□□□ -1.2
RTN3-206ENST00000377819 PRUNE2Q8WUY3 3088 aa7.58□□□□□ -1.2
RTN3-206ENST00000377819 IGLV4-60A0A075B6I1 120 aa7.57□□□□□ -1.2
RTN3-206ENST00000377819 USP34Q70CQ2 3546 aa7.57□□□□□ -1.2
RTN3-206ENST00000377819 LINC00313P59037 77 aa7.57□□□□□ -1.2
RTN3-206ENST00000377819 COL27A1Q8IZC6 1860 aaPredicted RBP7.57□□□□□ -1.2
RTN3-206ENST00000377819 A0A1B0GUV1 79 aa7.57□□□□□ -1.2
RTN3-206ENST00000377819 TYMSOSQ8TAI1 123 aa7.57□□□□□ -1.2
RTN3-206ENST00000377819 IGLV1-51P01701 117 aa7.56□□□□□ -1.2
RTN3-206ENST00000377819 APLNQ9ULZ1 77 aa7.56□□□□□ -1.2
RTN3-206ENST00000377819 C2orf91Q6ZV80 131 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms