RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 Q6ZRP5 223 aa7.22□□□□□ -1.25
SMARCE1-203ENST00000377808 PHF5AQ7RTV0 110 aaKnown RBP7.22□□□□□ -1.25
SMARCE1-203ENST00000377808 FAM19A5Q7Z5A7 132 aaPredicted RBP7.22□□□□□ -1.25
SMARCE1-203ENST00000377808 LINC01561Q8N1V8 128 aa7.22□□□□□ -1.25
SMARCE1-203ENST00000377808 LINC00469Q8N7U9 141 aa7.22□□□□□ -1.25
SMARCE1-203ENST00000377808 CDKN2A-AS1Q9UH64 79 aa7.22□□□□□ -1.25
SMARCE1-203ENST00000377808 TRBV30A0A0K0K1B3 111 aa7.21□□□□□ -1.26
SMARCE1-203ENST00000377808 LCE2CQ5TA81 110 aa7.21□□□□□ -1.26
SMARCE1-203ENST00000377808 FAM168BA1KXE4 195 aa7.2□□□□□ -1.26
SMARCE1-203ENST00000377808 LINC01549A6NIU2 74 aa7.2□□□□□ -1.26
SMARCE1-203ENST00000377808 TLX1NBP0CAT3 122 aa7.2□□□□□ -1.26
SMARCE1-203ENST00000377808 NDUFA6P56556 154 aa7.2□□□□□ -1.26
SMARCE1-203ENST00000377808 FAM19A3Q7Z5A8 133 aa7.2□□□□□ -1.26
SMARCE1-203ENST00000377808 Q8IZM0 81 aa7.2□□□□□ -1.26
SMARCE1-203ENST00000377808 LINC01546A6NGU7 62 aa7.19□□□□□ -1.26
SMARCE1-203ENST00000377808 PMVKQ15126 192 aa7.19□□□□□ -1.26
SMARCE1-203ENST00000377808 TINCRA0A1B0GVN0 87 aa7.18□□□□□ -1.26
SMARCE1-203ENST00000377808 NDUFC2-KCTD14E9PQ53 114 aa7.18□□□□□ -1.26
SMARCE1-203ENST00000377808 PMCHL1Q16048 86 aa7.18□□□□□ -1.26
SMARCE1-203ENST00000377808 C1orf137Q5JT78 98 aa7.18□□□□□ -1.26
SMARCE1-203ENST00000377808 C18orf32Q8TCD1 76 aa7.18□□□□□ -1.26
SMARCE1-203ENST00000377808 CST9LQ9H4G1 147 aa7.18□□□□□ -1.26
SMARCE1-203ENST00000377808 SPINK8P0C7L1 97 aa7.17□□□□□ -1.26
SMARCE1-203ENST00000377808 LINC00614P0C842 121 aa7.17□□□□□ -1.26
SMARCE1-203ENST00000377808 PSORS1C2Q9UIG4 136 aa7.17□□□□□ -1.26
SMARCE1-203ENST00000377808 SMIM1B2RUZ4 78 aa7.16□□□□□ -1.26
SMARCE1-203ENST00000377808 F8VRH5 84 aa7.16□□□□□ -1.26
SMARCE1-203ENST00000377808 M0QXV9 152 aa7.16□□□□□ -1.26
SMARCE1-203ENST00000377808 HBDP02042 147 aa7.16□□□□□ -1.26
SMARCE1-203ENST00000377808 UBE2BP63146 152 aa7.16□□□□□ -1.26
SMARCE1-203ENST00000377808 SPINK6Q6UWN8 80 aa7.16□□□□□ -1.26
SMARCE1-203ENST00000377808 COX7B2Q8TF08 81 aa7.16□□□□□ -1.26
SMARCE1-203ENST00000377808 H3BRM9 83 aa7.15□□□□□ -1.26
SMARCE1-203ENST00000377808 CXCL5P42830 114 aa7.15□□□□□ -1.26
SMARCE1-203ENST00000377808 RAB5BP61020 215 aa7.15□□□□□ -1.26
SMARCE1-203ENST00000377808 PDZD11Q5EBL8 140 aa7.15□□□□□ -1.26
SMARCE1-203ENST00000377808 C9orf129Q5T035 196 aaKnown RBP7.15□□□□□ -1.26
SMARCE1-203ENST00000377808 SERTAD4-AS1Q5TG53 156 aa7.15□□□□□ -1.26
SMARCE1-203ENST00000377808 REG3GQ6UW15 175 aa7.15□□□□□ -1.26
SMARCE1-203ENST00000377808 URB1-AS1Q96HZ7 61 aa7.15□□□□□ -1.26
SMARCE1-203ENST00000377808 A0A096LNJ9 63 aa7.14□□□□□ -1.27
SMARCE1-203ENST00000377808 CBLN2Q8IUK8 224 aa7.14□□□□□ -1.27
SMARCE1-203ENST00000377808 XAGE1AQ9HD64 81 aa7.14□□□□□ -1.27
SMARCE1-203ENST00000377808 IGLV5-45A0A087WSX0 123 aa7.13□□□□□ -1.27
SMARCE1-203ENST00000377808 MT1HL1P0DM35 61 aa7.13□□□□□ -1.27
SMARCE1-203ENST00000377808 ATP5LO75964 103 aa7.12□□□□□ -1.27
SMARCE1-203ENST00000377808 IGLC3P0DOY3 106 aa7.11□□□□□ -1.27
SMARCE1-203ENST00000377808 SRSF9Q13242 221 aaKnown RBP eCLIP7.11□□□□□ -1.27
SMARCE1-203ENST00000377808 BAGE3Q86Y29 109 aa7.11□□□□□ -1.27
SMARCE1-203ENST00000377808 YPEL4Q96NS1 127 aa7.11□□□□□ -1.27
SMARCE1-203ENST00000377808 PLA2G2DQ9UNK4 145 aa7.11□□□□□ -1.27
SMARCE1-203ENST00000377808 IGLV7-43P04211 117 aa7.1□□□□□ -1.27
SMARCE1-203ENST00000377808 ZNF22P17026 224 aaPredicted RBP7.1□□□□□ -1.27
SMARCE1-203ENST00000377808 TMEM170BQ5T4T1 132 aa7.1□□□□□ -1.27
SMARCE1-203ENST00000377808 KRTAP11-1Q8IUC1 163 aa7.1□□□□□ -1.27
SMARCE1-203ENST00000377808 KRTAP7-1Q8IUC3 87 aa7.1□□□□□ -1.27
SMARCE1-203ENST00000377808 SLC7A5P1Q8MH63 180 aa7.1□□□□□ -1.27
SMARCE1-203ENST00000377808 LINC01600Q96MT4 127 aa7.1□□□□□ -1.27
SMARCE1-203ENST00000377808 HMCN2Q8NDA2 5059 aa7.1□□□□□ -1.27
SMARCE1-203ENST00000377808 TNXBP22105 4242 aa7.1□□□□□ -1.27
SMARCE1-203ENST00000377808 CHCHD1Q96BP2 118 aaKnown RBP7.09□□□□□ -1.27
SMARCE1-203ENST00000377808 C22orf24Q9Y442 160 aa7.09□□□□□ -1.27
SMARCE1-203ENST00000377808 CHTOPQ9Y3Y2 248 aaKnown RBP7.08□□□□□ -1.28
SMARCE1-203ENST00000377808 C11orf86A6NJI1 115 aa7.07□□□□□ -1.28
SMARCE1-203ENST00000377808 HSBP1O75506 76 aa7.07□□□□□ -1.28
SMARCE1-203ENST00000377808 PFN2P35080 140 aa7.07□□□□□ -1.28
SMARCE1-203ENST00000377808 LBHQ53QV2 105 aaPredicted RBP7.07□□□□□ -1.28
SMARCE1-203ENST00000377808 DIRC1Q969H9 104 aa7.07□□□□□ -1.28
SMARCE1-203ENST00000377808 H0Y8G0 127 aa7.06□□□□□ -1.28
SMARCE1-203ENST00000377808 TRGC2P03986 189 aa7.06□□□□□ -1.28
SMARCE1-203ENST00000377808 IFI27L1Q96BM0 104 aa7.06□□□□□ -1.28
SMARCE1-203ENST00000377808 IGLV5-39A0A0G2JS06 123 aa7.05□□□□□ -1.28
SMARCE1-203ENST00000377808 LORP23490 312 aaPredicted RBP7.05□□□□□ -1.28
SMARCE1-203ENST00000377808 ODF1Q14990 250 aa7.05□□□□□ -1.28
SMARCE1-203ENST00000377808 MRPL55Q7Z7F7 128 aaKnown RBP7.05□□□□□ -1.28
SMARCE1-203ENST00000377808 FAM19A2Q8N3H0 131 aa7.05□□□□□ -1.28
SMARCE1-203ENST00000377808 ZNF625Q96I27 306 aaPredicted RBP7.05□□□□□ -1.28
SMARCE1-203ENST00000377808 GAGE10A6NGK3 116 aa7.04□□□□□ -1.28
SMARCE1-203ENST00000377808 H0Y9J4 135 aa7.04□□□□□ -1.28
SMARCE1-203ENST00000377808 NKAPP1Q8N9T2 125 aa7.04□□□□□ -1.28
SMARCE1-203ENST00000377808 TRAV12-1A0A0B4J245 112 aa7.03□□□□□ -1.28
SMARCE1-203ENST00000377808 RPL37AP8A6NKH3 93 aa7.03□□□□□ -1.28
SMARCE1-203ENST00000377808 ERG28Q9UKR5 140 aa7.03□□□□□ -1.28
SMARCE1-203ENST00000377808 NUPR1O60356 82 aa7.02□□□□□ -1.28
SMARCE1-203ENST00000377808 TP73-AS1Q9UF72 201 aa7.02□□□□□ -1.28
SMARCE1-203ENST00000377808 A6NJY4 79 aa7.01□□□□□ -1.29
SMARCE1-203ENST00000377808 SERF1AO75920 110 aa7.01□□□□□ -1.29
SMARCE1-203ENST00000377808 KRTAP10-8P60410 259 aa7.01□□□□□ -1.29
SMARCE1-203ENST00000377808 LINC00167Q96N53 147 aa7.01□□□□□ -1.29
SMARCE1-203ENST00000377808 A0A0U1RRA0 63 aa7.01□□□□□ -1.29
SMARCE1-203ENST00000377808 TMEM223A0PJW6 202 aa7.01□□□□□ -1.29
SMARCE1-203ENST00000377808 ZNF861PO60384 105 aa7.01□□□□□ -1.29
SMARCE1-203ENST00000377808 SCO1O75880 301 aa7.01□□□□□ -1.29
SMARCE1-203ENST00000377808 LEPROTL1O95214 131 aa7.01□□□□□ -1.29
SMARCE1-203ENST00000377808 SFTA2Q6UW10 78 aa7.01□□□□□ -1.29
SMARCE1-203ENST00000377808 PRR26Q8N8Z3 221 aa7.01□□□□□ -1.29
SMARCE1-203ENST00000377808 IGKV2-28A0A075B6P5 120 aa7□□□□□ -1.29
SMARCE1-203ENST00000377808 IGKV2D-28P01615 120 aa7□□□□□ -1.29
SMARCE1-203ENST00000377808 FABP4P15090 132 aa7□□□□□ -1.29
SMARCE1-203ENST00000377808 LINC00158P58513 81 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms