RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 MALP21145 153 aa12.09□□□□□ -0.47
TRIM27-201ENST00000377194 TRBV10-1A0A0K0K1A3 114 aa12.09□□□□□ -0.47
TRIM27-201ENST00000377194 INAFM2P0DMQ5 153 aa12.09□□□□□ -0.47
TRIM27-201ENST00000377194 PRIMA1Q86XR5 153 aa12.09□□□□□ -0.47
TRIM27-201ENST00000377194 LOC100131303A0A0U1RQF7 123 aa12.08□□□□□ -0.48
TRIM27-201ENST00000377194 DNAL4O96015 105 aa12.08□□□□□ -0.48
TRIM27-201ENST00000377194 RPL18AQ02543 176 aaKnown RBP12.08□□□□□ -0.48
TRIM27-201ENST00000377194 SMIM1B2RUZ4 78 aa12.07□□□□□ -0.48
TRIM27-201ENST00000377194 DPH3Q96FX2 82 aa12.07□□□□□ -0.48
TRIM27-201ENST00000377194 C16orf74Q96GX8 76 aa12.07□□□□□ -0.48
TRIM27-201ENST00000377194 TRGV2A0A075B6R0 118 aa12.07□□□□□ -0.48
TRIM27-201ENST00000377194 NBEAL2Q6ZNJ1 2754 aa12.07□□□□□ -0.48
TRIM27-201ENST00000377194 C4orf26Q17RF5 130 aa12.06□□□□□ -0.48
TRIM27-201ENST00000377194 A0A087WYN8 130 aa12.05□□□□□ -0.48
TRIM27-201ENST00000377194 LY6G6DO95868 133 aa12.05□□□□□ -0.48
TRIM27-201ENST00000377194 LINC00846Q9NV44 126 aa12.05□□□□□ -0.48
TRIM27-201ENST00000377194 RPS28P62857 69 aaKnown RBP12.05□□□□□ -0.48
TRIM27-201ENST00000377194 COPS9Q8WXC6 57 aa12.04□□□□□ -0.48
TRIM27-201ENST00000377194 FAM222AQ5U5X8 452 aa12.04□□□□□ -0.48
TRIM27-201ENST00000377194 SPATA3Q8NHX4 192 aa12.04□□□□□ -0.48
TRIM27-201ENST00000377194 OVOL2Q9BRP0 275 aa12.04□□□□□ -0.48
TRIM27-201ENST00000377194 HRCT1Q6UXD1 115 aa12.03□□□□□ -0.48
TRIM27-201ENST00000377194 CDC42SE2Q9NRR3 84 aa12.03□□□□□ -0.48
TRIM27-201ENST00000377194 TENM1Q9UKZ4 2725 aa12.02□□□□□ -0.48
TRIM27-201ENST00000377194 LINC01561Q8N1V8 128 aa12.02□□□□□ -0.49
TRIM27-201ENST00000377194 SERP2Q8N6R1 65 aa12.02□□□□□ -0.49
TRIM27-201ENST00000377194 UPK3BQ9BT76 320 aa12.02□□□□□ -0.49
TRIM27-201ENST00000377194 LINC00482Q8N8I6 264 aa12.02□□□□□ -0.49
TRIM27-201ENST00000377194 NSD1Q96L73 2696 aaPredicted RBP12.01□□□□□ -0.49
TRIM27-201ENST00000377194 PF4P02776 101 aa12.01□□□□□ -0.49
TRIM27-201ENST00000377194 LINC00337Q8N6G1 96 aa12.01□□□□□ -0.49
TRIM27-201ENST00000377194 NCR3O14931 201 aa12.01□□□□□ -0.49
TRIM27-201ENST00000377194 TMEM258P61165 79 aa12.01□□□□□ -0.49
TRIM27-201ENST00000377194 TRBV6-4A0A1B0GX49 114 aa12□□□□□ -0.49
TRIM27-201ENST00000377194 USP17L23D6RBM5 183 aa12□□□□□ -0.49
TRIM27-201ENST00000377194 TRGV4A0A0C4DH28 118 aa12□□□□□ -0.49
TRIM27-201ENST00000377194 CRPP02741 224 aa12□□□□□ -0.49
TRIM27-201ENST00000377194 FHL2Q14192 279 aa12□□□□□ -0.49
TRIM27-201ENST00000377194 F5H768 121 aa11.99□□□□□ -0.49
TRIM27-201ENST00000377194 SLPIP03973 132 aa11.99□□□□□ -0.49
TRIM27-201ENST00000377194 FAM19A3Q7Z5A8 133 aa11.99□□□□□ -0.49
TRIM27-201ENST00000377194 WFDC9Q8NEX5 89 aa11.98□□□□□ -0.49
TRIM27-201ENST00000377194 TMEM243Q9BU79 118 aa11.98□□□□□ -0.49
TRIM27-201ENST00000377194 RPL28P46779 137 aaKnown RBP11.98□□□□□ -0.49
TRIM27-201ENST00000377194 INAFM1C9JVW0 142 aa11.97□□□□□ -0.49
TRIM27-201ENST00000377194 SMIM11BQ8TCY0 68 aa11.97□□□□□ -0.49
TRIM27-201ENST00000377194 IGKV2-28A0A075B6P5 120 aa11.97□□□□□ -0.49
TRIM27-201ENST00000377194 IGKV2D-28P01615 120 aa11.97□□□□□ -0.49
TRIM27-201ENST00000377194 Q6JHZ5 121 aa11.97□□□□□ -0.49
TRIM27-201ENST00000377194 DEFB130BP0DP73 79 aa11.96□□□□□ -0.49
TRIM27-201ENST00000377194 DEFB130AP0DP74 79 aa11.96□□□□□ -0.49
TRIM27-201ENST00000377194 MIR7-3HGQ8N6C7 128 aa11.96□□□□□ -0.49
TRIM27-201ENST00000377194 TRAV13-2A0A0B4J235 113 aa11.96□□□□□ -0.5
TRIM27-201ENST00000377194 UBE2L6O14933 153 aa11.96□□□□□ -0.5
TRIM27-201ENST00000377194 LECT2O14960 151 aa11.95□□□□□ -0.5
TRIM27-201ENST00000377194 Q5XG85 94 aa11.95□□□□□ -0.5
TRIM27-201ENST00000377194 SND1-IT1Q9HBX3 110 aa11.95□□□□□ -0.5
TRIM27-201ENST00000377194 HIVEP1P15822 2718 aa11.95□□□□□ -0.5
TRIM27-201ENST00000377194 TOMM7Q9P0U1 55 aa11.94□□□□□ -0.5
TRIM27-201ENST00000377194 TRRAPQ9Y4A5 3859 aa11.94□□□□□ -0.5
TRIM27-201ENST00000377194 ATRQ13535 2644 aa11.94□□□□□ -0.5
TRIM27-201ENST00000377194 IGLV4-60A0A075B6I1 120 aa11.93□□□□□ -0.5
TRIM27-201ENST00000377194 WIPF1O43516 503 aa11.93□□□□□ -0.5
TRIM27-201ENST00000377194 TRBV6-8A0A0A6YYG3 113 aa11.92□□□□□ -0.5
TRIM27-201ENST00000377194 X6R8D5 127 aa11.92□□□□□ -0.5
TRIM27-201ENST00000377194 IGKV3OR2-268A0A0C4DH90 116 aa11.92□□□□□ -0.5
TRIM27-201ENST00000377194 TRAV23DV6A0A075B6W5 121 aa11.91□□□□□ -0.5
TRIM27-201ENST00000377194 LINC00158P58513 81 aa11.91□□□□□ -0.5
TRIM27-201ENST00000377194 LINC00612Q8N6U2 182 aa11.9□□□□□ -0.5
TRIM27-201ENST00000377194 COX7B2Q8TF08 81 aa11.89□□□□□ -0.51
TRIM27-201ENST00000377194 GHRHP01286 108 aa11.89□□□□□ -0.51
TRIM27-201ENST00000377194 OBSCN-AS1Q96MR7 158 aa11.88□□□□□ -0.51
TRIM27-201ENST00000377194 FAM19A1Q7Z5A9 133 aa11.88□□□□□ -0.51
TRIM27-201ENST00000377194 PFN2P35080 140 aa11.87□□□□□ -0.51
TRIM27-201ENST00000377194 TEP1Q99973 2627 aaKnown RBP11.87□□□□□ -0.51
TRIM27-201ENST00000377194 CCL18P55774 89 aa11.87□□□□□ -0.51
TRIM27-201ENST00000377194 DEFB4AO15263 64 aa11.86□□□□□ -0.51
TRIM27-201ENST00000377194 GYPEP15421 78 aa11.86□□□□□ -0.51
TRIM27-201ENST00000377194 C20orf197Q8N268 126 aa11.85□□□□□ -0.51
TRIM27-201ENST00000377194 H0YGX0 51 aa11.85□□□□□ -0.51
TRIM27-201ENST00000377194 PAX4O43316 350 aa11.84□□□□□ -0.51
TRIM27-201ENST00000377194 SS18Q15532 418 aa11.84□□□□□ -0.51
TRIM27-201ENST00000377194 C9orf66Q5T8R8 295 aa11.84□□□□□ -0.51
TRIM27-201ENST00000377194 ENHOQ6UWT2 76 aa11.84□□□□□ -0.51
TRIM27-201ENST00000377194 A0A096LPF7 62 aa11.84□□□□□ -0.51
TRIM27-201ENST00000377194 IGHV3OR16-9A0A0B4J2B5 98 aa11.84□□□□□ -0.51
TRIM27-201ENST00000377194 DEFB135Q30KP9 77 aa11.84□□□□□ -0.51
TRIM27-201ENST00000377194 C11orf68Q9H3H3 251 aaKnown RBP11.84□□□□□ -0.51
TRIM27-201ENST00000377194 CCKP06307 115 aa11.81□□□□□ -0.52
TRIM27-201ENST00000377194 ORMDL1Q9P0S3 153 aa11.81□□□□□ -0.52
TRIM27-201ENST00000377194 PRO0255Q9UI72 69 aa11.81□□□□□ -0.52
TRIM27-201ENST00000377194 LINC00959A0A1B0GUT2 108 aa11.79□□□□□ -0.52
TRIM27-201ENST00000377194 A0A087WZ39 114 aa11.78□□□□□ -0.52
TRIM27-201ENST00000377194 IBA57-AS1B1ANH7 110 aa11.77□□□□□ -0.52
TRIM27-201ENST00000377194 IGHV4-28A0A0C4DH34 117 aa11.77□□□□□ -0.53
TRIM27-201ENST00000377194 FAM236DA0A1B0GTK5 79 aa11.77□□□□□ -0.53
TRIM27-201ENST00000377194 FAM236CP0DP71 79 aa11.77□□□□□ -0.53
TRIM27-201ENST00000377194 CLPSL2Q6UWE3 100 aa11.77□□□□□ -0.53
TRIM27-201ENST00000377194 XCL1P47992 114 aa11.76□□□□□ -0.53
TRIM27-201ENST00000377194 PRR3P79522 188 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms