RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 KIAA0087Q14695 138 aa7.48□□□□□ -1.21
PDPN-202ENST00000376057 MUC7Q8TAX7 377 aa7.48□□□□□ -1.21
PDPN-202ENST00000376057 GAGE12HA6NDE8 117 aa7.47□□□□□ -1.21
PDPN-202ENST00000376057 CLPSL2Q6UWE3 100 aa7.47□□□□□ -1.21
PDPN-202ENST00000376057 SCGB1A1P11684 91 aa7.47□□□□□ -1.21
PDPN-202ENST00000376057 COX17Q14061 63 aa7.46□□□□□ -1.21
PDPN-202ENST00000376057 ADAMTSL4-AS1Q5T5F5 129 aa7.46□□□□□ -1.21
PDPN-202ENST00000376057 PRSS2P07478 247 aa7.46□□□□□ -1.22
PDPN-202ENST00000376057 MALP21145 153 aa7.46□□□□□ -1.22
PDPN-202ENST00000376057 UBE2WQ96B02 151 aa7.46□□□□□ -1.22
PDPN-202ENST00000376057 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.46□□□□□ -1.22
PDPN-202ENST00000376057 C9orf118A6NHY6 69 aa7.46□□□□□ -1.22
PDPN-202ENST00000376057 C6orf226Q5I0X4 101 aa7.46□□□□□ -1.22
PDPN-202ENST00000376057 DNHD1Q96M86 4753 aa7.45□□□□□ -1.22
PDPN-202ENST00000376057 A0A0B4J2C4 111 aa7.45□□□□□ -1.22
PDPN-202ENST00000376057 LOC107984156A0A0G2JMH3 177 aa7.45□□□□□ -1.22
PDPN-202ENST00000376057 MUSTN1Q8IVN3 82 aa7.45□□□□□ -1.22
PDPN-202ENST00000376057 ARL17AQ8IVW1 177 aa7.45□□□□□ -1.22
PDPN-202ENST00000376057 GVQW2A0A096LPI5 108 aaPredicted RBP7.45□□□□□ -1.22
PDPN-202ENST00000376057 COL7A1Q02388 2944 aa7.45□□□□□ -1.22
PDPN-202ENST00000376057 RMI2Q96E14 147 aa7.44□□□□□ -1.22
PDPN-202ENST00000376057 DNAH7Q8WXX0 4024 aa7.44□□□□□ -1.22
PDPN-202ENST00000376057 IGLV10-54A0A075B6I4 117 aa7.44□□□□□ -1.22
PDPN-202ENST00000376057 NHP2Q9NX24 153 aaKnown RBP7.43□□□□□ -1.22
PDPN-202ENST00000376057 LINC00308Q8TCZ7 52 aa7.43□□□□□ -1.22
PDPN-202ENST00000376057 C1orf43Q9BWL3 253 aa7.43□□□□□ -1.22
PDPN-202ENST00000376057 CFC1BP0CG36 223 aa7.42□□□□□ -1.22
PDPN-202ENST00000376057 CFC1P0CG37 223 aa7.42□□□□□ -1.22
PDPN-202ENST00000376057 C2orf48Q96LS8 159 aa7.42□□□□□ -1.22
PDPN-202ENST00000376057 TOMM7Q9P0U1 55 aa7.42□□□□□ -1.22
PDPN-202ENST00000376057 CKS1BP61024 79 aa7.42□□□□□ -1.22
PDPN-202ENST00000376057 NTN5Q8WTR8 489 aaPredicted RBP7.42□□□□□ -1.22
PDPN-202ENST00000376057 ERG28Q9UKR5 140 aa7.42□□□□□ -1.22
PDPN-202ENST00000376057 A4D1N5 150 aa7.42□□□□□ -1.22
PDPN-202ENST00000376057 MEIG1Q5JSS6 88 aa7.42□□□□□ -1.22
PDPN-202ENST00000376057 DNAH1Q9P2D7 4330 aa7.41□□□□□ -1.22
PDPN-202ENST00000376057 PRKDCP78527 4128 aaKnown RBP7.4□□□□□ -1.22
PDPN-202ENST00000376057 SPAG11BQ08648 103 aa7.4□□□□□ -1.22
PDPN-202ENST00000376057 PGPEP1Q9NXJ5 209 aa7.4□□□□□ -1.22
PDPN-202ENST00000376057 PRO1854Q9UHT4 67 aa7.4□□□□□ -1.22
PDPN-202ENST00000376057 TRBV30A0A0K0K1B3 111 aa7.4□□□□□ -1.23
PDPN-202ENST00000376057 MEGF8Q7Z7M0 2845 aa7.4□□□□□ -1.23
PDPN-202ENST00000376057 C15orf56Q8N910 161 aa7.39□□□□□ -1.23
PDPN-202ENST00000376057 SIGMAR1Q99720 223 aa7.39□□□□□ -1.23
PDPN-202ENST00000376057 A0A1W2PPM0 123 aa7.38□□□□□ -1.23
PDPN-202ENST00000376057 K7ERJ3 54 aa7.38□□□□□ -1.23
PDPN-202ENST00000376057 EIF4EBP3O60516 100 aaPredicted RBP7.38□□□□□ -1.23
PDPN-202ENST00000376057 SOSTDC1Q6X4U4 206 aa7.38□□□□□ -1.23
PDPN-202ENST00000376057 MIR7-3HGQ8N6C7 128 aa7.37□□□□□ -1.23
PDPN-202ENST00000376057 IGKV2D-24A0A075B6R9 120 aa7.37□□□□□ -1.23
PDPN-202ENST00000376057 LINC00158P58513 81 aa7.37□□□□□ -1.23
PDPN-202ENST00000376057 TTC32Q5I0X7 151 aa7.37□□□□□ -1.23
PDPN-202ENST00000376057 C2orf82Q6UX34 121 aa7.37□□□□□ -1.23
PDPN-202ENST00000376057 RAB37Q96AX2 223 aa7.37□□□□□ -1.23
PDPN-202ENST00000376057 H3BUT2 72 aa7.36□□□□□ -1.23
PDPN-202ENST00000376057 NDUFC2O95298 119 aa7.36□□□□□ -1.23
PDPN-202ENST00000376057 UBE2DNLQ8IWF7 75 aa7.36□□□□□ -1.23
PDPN-202ENST00000376057 ZNF561-AS1K7EIQ3 104 aa7.36□□□□□ -1.23
PDPN-202ENST00000376057 TSPAN13O95857 204 aa7.36□□□□□ -1.23
PDPN-202ENST00000376057 FABP2P12104 132 aa7.35□□□□□ -1.23
PDPN-202ENST00000376057 DAND5Q8N907 189 aa7.35□□□□□ -1.23
PDPN-202ENST00000376057 GAGE10A6NGK3 116 aa7.35□□□□□ -1.23
PDPN-202ENST00000376057 LYRM7Q5U5X0 104 aa7.35□□□□□ -1.23
PDPN-202ENST00000376057 UNQ6190/PRO20217Q6UXQ8 127 aa7.35□□□□□ -1.23
PDPN-202ENST00000376057 SS18L2Q9UHA2 77 aa7.34□□□□□ -1.23
PDPN-202ENST00000376057 K7EP34 96 aa7.34□□□□□ -1.23
PDPN-202ENST00000376057 GTF2H5Q6ZYL4 71 aa7.34□□□□□ -1.23
PDPN-202ENST00000376057 C6orf223Q8N319 242 aa7.34□□□□□ -1.23
PDPN-202ENST00000376057 TRAV13-2A0A0B4J235 113 aa7.33□□□□□ -1.24
PDPN-202ENST00000376057 C10orf25Q5T742 122 aa7.33□□□□□ -1.24
PDPN-202ENST00000376057 C6orf48Q9UBA6 75 aa7.33□□□□□ -1.24
PDPN-202ENST00000376057 STAB2Q8WWQ8 2551 aa7.33□□□□□ -1.24
PDPN-202ENST00000376057 TLX1NBP0CAT3 122 aa7.33□□□□□ -1.24
PDPN-202ENST00000376057 SND1-IT1Q9HBX3 110 aa7.33□□□□□ -1.24
PDPN-202ENST00000376057 CSMD3Q7Z407 3707 aa7.33□□□□□ -1.24
PDPN-202ENST00000376057 PFN2P35080 140 aa7.33□□□□□ -1.24
PDPN-202ENST00000376057 NBDYA0A0U1RRE5 68 aa7.32□□□□□ -1.24
PDPN-202ENST00000376057 CAMK2N2Q96S95 79 aa7.32□□□□□ -1.24
PDPN-202ENST00000376057 KRTAP1-5Q9BYS1 174 aa7.32□□□□□ -1.24
PDPN-202ENST00000376057 Q9HAA7 133 aa7.32□□□□□ -1.24
PDPN-202ENST00000376057 MTURNQ8N3F0 131 aa7.32□□□□□ -1.24
PDPN-202ENST00000376057 TRBV20-1A0A075B6N2 111 aa7.31□□□□□ -1.24
PDPN-202ENST00000376057 A0A0U1RRA0 63 aa7.31□□□□□ -1.24
PDPN-202ENST00000376057 NPC2P61916 151 aa7.31□□□□□ -1.24
PDPN-202ENST00000376057 WWC2-AS2Q96NR7 200 aa7.31□□□□□ -1.24
PDPN-202ENST00000376057 IGKV2-28A0A075B6P5 120 aa7.3□□□□□ -1.24
PDPN-202ENST00000376057 USP17L23D6RBM5 183 aa7.3□□□□□ -1.24
PDPN-202ENST00000376057 IGKV2D-28P01615 120 aa7.3□□□□□ -1.24
PDPN-202ENST00000376057 SYCNQ0VAF6 134 aa7.3□□□□□ -1.24
PDPN-202ENST00000376057 Q6ZRU5 148 aa7.3□□□□□ -1.24
PDPN-202ENST00000376057 SPCS1Q9Y6A9 102 aa7.3□□□□□ -1.24
PDPN-202ENST00000376057 NDUFC2-KCTD14E9PQ53 114 aa7.29□□□□□ -1.24
PDPN-202ENST00000376057 HIGD2BQ4VC39 106 aa7.29□□□□□ -1.24
PDPN-202ENST00000376057 C14orf177Q52M58 125 aa7.29□□□□□ -1.24
PDPN-202ENST00000376057 TRBV10-2A0A0K0K1G8 114 aa7.29□□□□□ -1.24
PDPN-202ENST00000376057 C9orf116Q5BN46 136 aaPredicted RBP7.29□□□□□ -1.24
PDPN-202ENST00000376057 RPL13AP40429 203 aaKnown RBP7.28□□□□□ -1.24
PDPN-202ENST00000376057 VPS13DQ5THJ4 4388 aa7.28□□□□□ -1.24
PDPN-202ENST00000376057 RPL28P46779 137 aaKnown RBP7.28□□□□□ -1.24
PDPN-202ENST00000376057 CNBPP62633 177 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms