RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 CCL18P55774 89 aa9.91□□□□□ -0.82
CLCNKA-202ENST00000375692 INAFM2P0DMQ5 153 aa9.91□□□□□ -0.82
CLCNKA-202ENST00000375692 PF4P02776 101 aa9.9□□□□□ -0.82
CLCNKA-202ENST00000375692 C5orf38Q86SI9 138 aa9.9□□□□□ -0.82
CLCNKA-202ENST00000375692 C16orf95Q9H693 158 aa9.9□□□□□ -0.82
CLCNKA-202ENST00000375692 C14orf132Q9NPU4 83 aa9.9□□□□□ -0.82
CLCNKA-202ENST00000375692 PLAC8L1A1L4L8 177 aa9.9□□□□□ -0.82
CLCNKA-202ENST00000375692 RPL35AP18077 110 aaKnown RBP9.9□□□□□ -0.82
CLCNKA-202ENST00000375692 C9orf153Q5TBE3 101 aa9.9□□□□□ -0.82
CLCNKA-202ENST00000375692 DNAL4O96015 105 aa9.89□□□□□ -0.83
CLCNKA-202ENST00000375692 KRTAP10-3P60369 221 aa9.89□□□□□ -0.83
CLCNKA-202ENST00000375692 C3orf22Q8N5N4 141 aa9.89□□□□□ -0.83
CLCNKA-202ENST00000375692 C11orf68Q9H3H3 251 aaKnown RBP9.89□□□□□ -0.83
CLCNKA-202ENST00000375692 CCL24O00175 119 aa9.88□□□□□ -0.83
CLCNKA-202ENST00000375692 SLPIP03973 132 aa9.88□□□□□ -0.83
CLCNKA-202ENST00000375692 VWFP04275 2813 aa9.88□□□□□ -0.83
CLCNKA-202ENST00000375692 IGHV3OR16-9A0A0B4J2B5 98 aa9.88□□□□□ -0.83
CLCNKA-202ENST00000375692 TRGV4A0A0C4DH28 118 aa9.88□□□□□ -0.83
CLCNKA-202ENST00000375692 TMEM126AQ9H061 195 aa9.88□□□□□ -0.83
CLCNKA-202ENST00000375692 TRAV25A0A0B4J276 109 aa9.87□□□□□ -0.83
CLCNKA-202ENST00000375692 LECT2O14960 151 aa9.87□□□□□ -0.83
CLCNKA-202ENST00000375692 PPDPFQ9H3Y8 114 aa9.87□□□□□ -0.83
CLCNKA-202ENST00000375692 PAX4O43316 350 aa9.87□□□□□ -0.83
CLCNKA-202ENST00000375692 OR13C6PQ8NH95 151 aa9.87□□□□□ -0.83
CLCNKA-202ENST00000375692 KLK5Q9Y337 293 aaPredicted RBP9.87□□□□□ -0.83
CLCNKA-202ENST00000375692 IGKV3D-7A0A0C4DH55 119 aa9.86□□□□□ -0.83
CLCNKA-202ENST00000375692 NCR3O14931 201 aa9.86□□□□□ -0.83
CLCNKA-202ENST00000375692 CXCL5P42830 114 aa9.86□□□□□ -0.83
CLCNKA-202ENST00000375692 TRBV6-8A0A0A6YYG3 113 aa9.85□□□□□ -0.83
CLCNKA-202ENST00000375692 UQCRQO14949 82 aa9.85□□□□□ -0.83
CLCNKA-202ENST00000375692 TRBV6-4A0A1B0GX49 114 aa9.85□□□□□ -0.83
CLCNKA-202ENST00000375692 LINC00846Q9NV44 126 aa9.84□□□□□ -0.83
CLCNKA-202ENST00000375692 FBN1P35555 2871 aaKnown RBP9.84□□□□□ -0.83
CLCNKA-202ENST00000375692 LINC00526Q96FQ7 95 aa9.84□□□□□ -0.83
CLCNKA-202ENST00000375692 C16orf74Q96GX8 76 aa9.84□□□□□ -0.83
CLCNKA-202ENST00000375692 NBEAL2Q6ZNJ1 2754 aa9.84□□□□□ -0.83
CLCNKA-202ENST00000375692 A0A087WZ39 114 aa9.83□□□□□ -0.84
CLCNKA-202ENST00000375692 IBA57-AS1B1ANH7 110 aa9.83□□□□□ -0.84
CLCNKA-202ENST00000375692 H0YGX0 51 aa9.83□□□□□ -0.84
CLCNKA-202ENST00000375692 FHL2Q14192 279 aa9.83□□□□□ -0.84
CLCNKA-202ENST00000375692 OVOL2Q9BRP0 275 aa9.83□□□□□ -0.84
CLCNKA-202ENST00000375692 C2orf48Q96LS8 159 aa9.82□□□□□ -0.84
CLCNKA-202ENST00000375692 C6orf226Q5I0X4 101 aa9.82□□□□□ -0.84
CLCNKA-202ENST00000375692 A0A087WVE0 104 aa9.81□□□□□ -0.84
CLCNKA-202ENST00000375692 COX7CP15954 63 aa9.81□□□□□ -0.84
CLCNKA-202ENST00000375692 XCL1P47992 114 aa9.81□□□□□ -0.84
CLCNKA-202ENST00000375692 PRR3P79522 188 aaKnown RBP9.81□□□□□ -0.84
CLCNKA-202ENST00000375692 LINC00959A0A1B0GUT2 108 aa9.81□□□□□ -0.84
CLCNKA-202ENST00000375692 OBSCN-AS1Q96MR7 158 aa9.81□□□□□ -0.84
CLCNKA-202ENST00000375692 HIST1H4AP62805 103 aaKnown RBP9.8□□□□□ -0.84
CLCNKA-202ENST00000375692 CLPSL2Q6UWE3 100 aa9.8□□□□□ -0.84
CLCNKA-202ENST00000375692 CSNK1G2-AS1Q8NCQ2 148 aa9.8□□□□□ -0.84
CLCNKA-202ENST00000375692 DEFB130BP0DP73 79 aa9.8□□□□□ -0.84
CLCNKA-202ENST00000375692 DEFB130AP0DP74 79 aa9.8□□□□□ -0.84
CLCNKA-202ENST00000375692 TRRAPQ9Y4A5 3859 aa9.8□□□□□ -0.84
CLCNKA-202ENST00000375692 LOC107984640A0A0U1RRK4 108 aa9.79□□□□□ -0.84
CLCNKA-202ENST00000375692 CYSTM1Q9H1C7 97 aa9.79□□□□□ -0.84
CLCNKA-202ENST00000375692 C19orf73Q9NVV2 129 aa9.79□□□□□ -0.84
CLCNKA-202ENST00000375692 hADV29S1A0JD25 119 aa9.78□□□□□ -0.84
CLCNKA-202ENST00000375692 SS18Q15532 418 aa9.78□□□□□ -0.84
CLCNKA-202ENST00000375692 SPATA3Q8NHX4 192 aa9.78□□□□□ -0.84
CLCNKA-202ENST00000375692 STAB1Q9NY15 2570 aa9.77□□□□□ -0.85
CLCNKA-202ENST00000375692 A0A096LPF7 62 aa9.77□□□□□ -0.85
CLCNKA-202ENST00000375692 A0A1B0GX51 115 aa9.77□□□□□ -0.85
CLCNKA-202ENST00000375692 ATOX1O00244 68 aa9.77□□□□□ -0.85
CLCNKA-202ENST00000375692 RPL18AQ02543 176 aaKnown RBP9.76□□□□□ -0.85
CLCNKA-202ENST00000375692 Q6JHZ5 121 aa9.76□□□□□ -0.85
CLCNKA-202ENST00000375692 ORMDL1Q9P0S3 153 aa9.76□□□□□ -0.85
CLCNKA-202ENST00000375692 LINC01561Q8N1V8 128 aa9.75□□□□□ -0.85
CLCNKA-202ENST00000375692 GYPEP15421 78 aa9.74□□□□□ -0.85
CLCNKA-202ENST00000375692 NANOS2P60321 138 aaKnown RBP9.74□□□□□ -0.85
CLCNKA-202ENST00000375692 CRYGAP11844 174 aa9.74□□□□□ -0.85
CLCNKA-202ENST00000375692 IGLV1-51P01701 117 aa9.73□□□□□ -0.85
CLCNKA-202ENST00000375692 COL6A5A8TX70 2615 aa9.73□□□□□ -0.85
CLCNKA-202ENST00000375692 WFDC9Q8NEX5 89 aa9.72□□□□□ -0.85
CLCNKA-202ENST00000375692 CCKP06307 115 aa9.72□□□□□ -0.85
CLCNKA-202ENST00000375692 CMC4P56277 68 aaPredicted RBP9.72□□□□□ -0.85
CLCNKA-202ENST00000375692 KRTAP24-1Q3LI83 254 aa9.72□□□□□ -0.85
CLCNKA-202ENST00000375692 CFAP161Q6P656 301 aa9.72□□□□□ -0.85
CLCNKA-202ENST00000375692 C9orf116Q5BN46 136 aaPredicted RBP9.71□□□□□ -0.85
CLCNKA-202ENST00000375692 USP17L23D6RBM5 183 aa9.71□□□□□ -0.86
CLCNKA-202ENST00000375692 Q8N814 137 aa9.71□□□□□ -0.86
CLCNKA-202ENST00000375692 Q8IZM0 81 aa9.7□□□□□ -0.86
CLCNKA-202ENST00000375692 Q8N3U1 123 aa9.7□□□□□ -0.86
CLCNKA-202ENST00000375692 IGLV10-54A0A075B6I4 117 aa9.69□□□□□ -0.86
CLCNKA-202ENST00000375692 SERP2Q8N6R1 65 aa9.69□□□□□ -0.86
CLCNKA-202ENST00000375692 LINC00269Q8N2A0 174 aa9.69□□□□□ -0.86
CLCNKA-202ENST00000375692 LINC00482Q8N8I6 264 aa9.69□□□□□ -0.86
CLCNKA-202ENST00000375692 Q8NDZ9 215 aa9.69□□□□□ -0.86
CLCNKA-202ENST00000375692 LINC00167Q96N53 147 aa9.68□□□□□ -0.86
CLCNKA-202ENST00000375692 A0A1B0GUV1 79 aa9.68□□□□□ -0.86
CLCNKA-202ENST00000375692 KIAA0087Q14695 138 aa9.68□□□□□ -0.86
CLCNKA-202ENST00000375692 KIR2DL5BQ8NHK3 375 aa9.68□□□□□ -0.86
CLCNKA-202ENST00000375692 UPK3BQ9BT76 320 aa9.68□□□□□ -0.86
CLCNKA-202ENST00000375692 PKD1L1Q8TDX9 2849 aa9.67□□□□□ -0.86
CLCNKA-202ENST00000375692 J3KT08 172 aa9.66□□□□□ -0.86
CLCNKA-202ENST00000375692 C6orf99Q4VX62 202 aa9.66□□□□□ -0.86
CLCNKA-202ENST00000375692 FAM19A1Q7Z5A9 133 aa9.66□□□□□ -0.86
CLCNKA-202ENST00000375692 JMJD7-PLA2G4BH0Y9G9 81 aa9.65□□□□□ -0.86
CLCNKA-202ENST00000375692 TMEM256-PLSCR3K7ERE1 68 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms