RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 GCN1Q92616 2671 aaKnown RBP12.77□□□□□ -0.37
PTPDC1-202ENST00000375360 IGKV2-28A0A075B6P5 120 aa12.76□□□□□ -0.37
PTPDC1-202ENST00000375360 IGKV2D-28P01615 120 aa12.76□□□□□ -0.37
PTPDC1-202ENST00000375360 CYSRT1A8MQ03 144 aa12.76□□□□□ -0.37
PTPDC1-202ENST00000375360 SMIM1B2RUZ4 78 aa12.76□□□□□ -0.37
PTPDC1-202ENST00000375360 TEX49A0A1B0GTD5 131 aa12.76□□□□□ -0.37
PTPDC1-202ENST00000375360 LINC00315P59091 139 aa12.75□□□□□ -0.37
PTPDC1-202ENST00000375360 RBM3P98179 157 aaKnown RBP12.75□□□□□ -0.37
PTPDC1-202ENST00000375360 NOTCH1P46531 2555 aa12.75□□□□□ -0.37
PTPDC1-202ENST00000375360 KRTAP24-1Q3LI83 254 aa12.75□□□□□ -0.37
PTPDC1-202ENST00000375360 UBR5O95071 2799 aaPredicted RBP12.74□□□□□ -0.37
PTPDC1-202ENST00000375360 SPANXDQ9BXN6 97 aa12.74□□□□□ -0.37
PTPDC1-202ENST00000375360 TNRC18O15417 2968 aaPredicted RBP12.74□□□□□ -0.37
PTPDC1-202ENST00000375360 A0A096LNT2 108 aa12.73□□□□□ -0.37
PTPDC1-202ENST00000375360 FAM19A4Q96LR4 140 aa12.73□□□□□ -0.37
PTPDC1-202ENST00000375360 A0A087WZ39 114 aa12.73□□□□□ -0.37
PTPDC1-202ENST00000375360 C14orf177Q52M58 125 aa12.73□□□□□ -0.37
PTPDC1-202ENST00000375360 CELA1Q9UNI1 258 aa12.72□□□□□ -0.37
PTPDC1-202ENST00000375360 PKIGQ9Y2B9 76 aa12.72□□□□□ -0.37
PTPDC1-202ENST00000375360 SPTBN5Q9NRC6 3674 aaKnown RBP12.72□□□□□ -0.37
PTPDC1-202ENST00000375360 TMEM256-PLSCR3K7ERE1 68 aa12.72□□□□□ -0.37
PTPDC1-202ENST00000375360 C9orf153Q5TBE3 101 aa12.72□□□□□ -0.37
PTPDC1-202ENST00000375360 JMJD7-PLA2G4BH0Y9G9 81 aa12.72□□□□□ -0.37
PTPDC1-202ENST00000375360 AMELXQ99217 191 aa12.71□□□□□ -0.37
PTPDC1-202ENST00000375360 CFAP47Q6ZTR5 3102 aa12.71□□□□□ -0.37
PTPDC1-202ENST00000375360 LY6G6CO95867 125 aa12.7□□□□□ -0.38
PTPDC1-202ENST00000375360 NREPQ16612 68 aa12.7□□□□□ -0.38
PTPDC1-202ENST00000375360 WFDC10BQ8IUB3 73 aa12.7□□□□□ -0.38
PTPDC1-202ENST00000375360 TIMM17BO60830 172 aa12.69□□□□□ -0.38
PTPDC1-202ENST00000375360 ACYP1P07311 99 aa12.69□□□□□ -0.38
PTPDC1-202ENST00000375360 PRR3P79522 188 aaKnown RBP12.69□□□□□ -0.38
PTPDC1-202ENST00000375360 ADAMTSL4-AS1Q5T5F5 129 aa12.69□□□□□ -0.38
PTPDC1-202ENST00000375360 FAM19A1Q7Z5A9 133 aa12.69□□□□□ -0.38
PTPDC1-202ENST00000375360 TRBV30A0A0K0K1B3 111 aa12.68□□□□□ -0.38
PTPDC1-202ENST00000375360 Q8IZM0 81 aa12.68□□□□□ -0.38
PTPDC1-202ENST00000375360 RPL37AP8A6NKH3 93 aa12.67□□□□□ -0.38
PTPDC1-202ENST00000375360 NTM-AS1Q6ZSK4 140 aa12.66□□□□□ -0.38
PTPDC1-202ENST00000375360 SMIM11BQ8TCY0 68 aa12.66□□□□□ -0.38
PTPDC1-202ENST00000375360 LRCOL1A6NCL2 159 aa12.66□□□□□ -0.38
PTPDC1-202ENST00000375360 CSDC2Q9Y534 153 aaKnown RBP12.66□□□□□ -0.38
PTPDC1-202ENST00000375360 LYPD5Q6UWN5 251 aa12.65□□□□□ -0.38
PTPDC1-202ENST00000375360 KALRNO60229 2985 aa12.65□□□□□ -0.38
PTPDC1-202ENST00000375360 DMXL1Q9Y485 3027 aa12.65□□□□□ -0.39
PTPDC1-202ENST00000375360 Q6ZQY7 126 aa12.64□□□□□ -0.39
PTPDC1-202ENST00000375360 C6orf223Q8N319 242 aa12.64□□□□□ -0.39
PTPDC1-202ENST00000375360 KLK9Q2XQG4 91 aa12.63□□□□□ -0.39
PTPDC1-202ENST00000375360 TRAV23DV6A0A075B6W5 121 aa12.62□□□□□ -0.39
PTPDC1-202ENST00000375360 NDUFS5O43920 106 aa12.62□□□□□ -0.39
PTPDC1-202ENST00000375360 FAM236AA0A1B0GUQ0 79 aa12.61□□□□□ -0.39
PTPDC1-202ENST00000375360 FAM236BA0A1B0GV22 79 aa12.61□□□□□ -0.39
PTPDC1-202ENST00000375360 X6R8D5 127 aa12.6□□□□□ -0.39
PTPDC1-202ENST00000375360 NBEAL1Q6ZS30 2694 aa12.6□□□□□ -0.39
PTPDC1-202ENST00000375360 CITED1Q99966 193 aa12.59□□□□□ -0.39
PTPDC1-202ENST00000375360 PPDPFQ9H3Y8 114 aa12.59□□□□□ -0.39
PTPDC1-202ENST00000375360 A0A1B0GUV1 79 aa12.59□□□□□ -0.39
PTPDC1-202ENST00000375360 B9D2Q9BPU9 175 aa12.58□□□□□ -0.4
PTPDC1-202ENST00000375360 LST1O00453 97 aa12.58□□□□□ -0.4
PTPDC1-202ENST00000375360 M0R378 163 aa12.57□□□□□ -0.4
PTPDC1-202ENST00000375360 USP17L23D6RBM5 183 aa12.56□□□□□ -0.4
PTPDC1-202ENST00000375360 MYO15AQ9UKN7 3530 aa12.56□□□□□ -0.4
PTPDC1-202ENST00000375360 A0A1B0GX51 115 aa12.56□□□□□ -0.4
PTPDC1-202ENST00000375360 ITPR1Q14643 2758 aa12.56□□□□□ -0.4
PTPDC1-202ENST00000375360 SBSPONQ8IVN8 264 aa12.56□□□□□ -0.4
PTPDC1-202ENST00000375360 SCXQ7RTU7 201 aa12.55□□□□□ -0.4
PTPDC1-202ENST00000375360 KRTAP1-3Q8IUG1 177 aa12.55□□□□□ -0.4
PTPDC1-202ENST00000375360 B5MCH6 92 aa12.55□□□□□ -0.4
PTPDC1-202ENST00000375360 COX17Q14061 63 aa12.54□□□□□ -0.4
PTPDC1-202ENST00000375360 H3BQ85 93 aa12.54□□□□□ -0.4
PTPDC1-202ENST00000375360 ZNF73O43830 326 aaPredicted RBP12.54□□□□□ -0.4
PTPDC1-202ENST00000375360 MT-ATP8P03928 68 aa12.54□□□□□ -0.4
PTPDC1-202ENST00000375360 BAHCC1Q9P281 2608 aa12.53□□□□□ -0.4
PTPDC1-202ENST00000375360 Q8N3U1 123 aa12.53□□□□□ -0.4
PTPDC1-202ENST00000375360 LOC400499M0QZD8 3231 aa12.53□□□□□ -0.4
PTPDC1-202ENST00000375360 EGFEM1PQ0D2K5 195 aa12.53□□□□□ -0.4
PTPDC1-202ENST00000375360 TRBV10-3A0A0K0K1G6 114 aa12.52□□□□□ -0.4
PTPDC1-202ENST00000375360 LOC107984640A0A0U1RRK4 108 aa12.52□□□□□ -0.41
PTPDC1-202ENST00000375360 IGHV3OR16-9A0A0B4J2B5 98 aa12.51□□□□□ -0.41
PTPDC1-202ENST00000375360 ESRGQ1W209 222 aa12.51□□□□□ -0.41
PTPDC1-202ENST00000375360 SDIM1Q6ZPB5 146 aa12.51□□□□□ -0.41
PTPDC1-202ENST00000375360 NDUFB1O75438 58 aa12.51□□□□□ -0.41
PTPDC1-202ENST00000375360 CCKP06307 115 aa12.51□□□□□ -0.41
PTPDC1-202ENST00000375360 LRBAP50851 2863 aa12.51□□□□□ -0.41
PTPDC1-202ENST00000375360 LINC00643Q86TS7 51 aa12.5□□□□□ -0.41
PTPDC1-202ENST00000375360 PDE6GP18545 87 aa12.5□□□□□ -0.41
PTPDC1-202ENST00000375360 C4orf48Q5BLP8 95 aa12.5□□□□□ -0.41
PTPDC1-202ENST00000375360 NBEAL2Q6ZNJ1 2754 aa12.5□□□□□ -0.41
PTPDC1-202ENST00000375360 NUPR2A6NF83 97 aa12.5□□□□□ -0.41
PTPDC1-202ENST00000375360 ITPR2Q14571 2701 aa12.5□□□□□ -0.41
PTPDC1-202ENST00000375360 C3orf84H3BNL1 204 aa12.49□□□□□ -0.41
PTPDC1-202ENST00000375360 H0Y9J4 135 aa12.49□□□□□ -0.41
PTPDC1-202ENST00000375360 A8MTW9 85 aa12.48□□□□□ -0.41
PTPDC1-202ENST00000375360 BPY2O14599 106 aa12.48□□□□□ -0.41
PTPDC1-202ENST00000375360 WFDC9Q8NEX5 89 aa12.47□□□□□ -0.41
PTPDC1-202ENST00000375360 KRTAP10-3P60369 221 aa12.46□□□□□ -0.41
PTPDC1-202ENST00000375360 Q6ZRU5 148 aa12.46□□□□□ -0.41
PTPDC1-202ENST00000375360 LINC01546A6NGU7 62 aa12.46□□□□□ -0.41
PTPDC1-202ENST00000375360 Q8NAQ8 132 aa12.45□□□□□ -0.42
PTPDC1-202ENST00000375360 KRTAP1-1Q07627 177 aa12.45□□□□□ -0.42
PTPDC1-202ENST00000375360 NDUFC2-KCTD14E9PQ53 114 aa12.43□□□□□ -0.42
PTPDC1-202ENST00000375360 M0QXV9 152 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms