RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 IGKV2-28A0A075B6P5 120 aa11.83□□□□□ -0.51
RXRB-201ENST00000374680 SNCGO76070 127 aa11.83□□□□□ -0.51
RXRB-201ENST00000374680 IGKV2D-28P01615 120 aa11.83□□□□□ -0.51
RXRB-201ENST00000374680 CELA1Q9UNI1 258 aa11.83□□□□□ -0.51
RXRB-201ENST00000374680 TRAV26-1A0A087WT03 109 aa11.83□□□□□ -0.52
RXRB-201ENST00000374680 ANGP03950 147 aaKnown RBP11.83□□□□□ -0.52
RXRB-201ENST00000374680 NOTCH1P46531 2555 aa11.83□□□□□ -0.52
RXRB-201ENST00000374680 M0QXV9 152 aa11.82□□□□□ -0.52
RXRB-201ENST00000374680 BAALC-AS2P0C853 105 aa11.82□□□□□ -0.52
RXRB-201ENST00000374680 C9orf116Q5BN46 136 aaPredicted RBP11.82□□□□□ -0.52
RXRB-201ENST00000374680 IGHV4-28A0A0C4DH34 117 aa11.82□□□□□ -0.52
RXRB-201ENST00000374680 SHISA2Q6UWI4 295 aa11.82□□□□□ -0.52
RXRB-201ENST00000374680 A0A087WZ39 114 aa11.81□□□□□ -0.52
RXRB-201ENST00000374680 RNF183Q96D59 192 aa11.81□□□□□ -0.52
RXRB-201ENST00000374680 H3BT86 120 aa11.81□□□□□ -0.52
RXRB-201ENST00000374680 DAD1P61803 113 aa11.81□□□□□ -0.52
RXRB-201ENST00000374680 KIR2DL5BQ8NHK3 375 aa11.81□□□□□ -0.52
RXRB-201ENST00000374680 SS18Q15532 418 aa11.8□□□□□ -0.52
RXRB-201ENST00000374680 SMIM11BQ8TCY0 68 aa11.8□□□□□ -0.52
RXRB-201ENST00000374680 MAST4O15021 2626 aa11.8□□□□□ -0.52
RXRB-201ENST00000374680 SLPIP03973 132 aa11.79□□□□□ -0.52
RXRB-201ENST00000374680 GAGE2BQ13066 116 aa11.79□□□□□ -0.52
RXRB-201ENST00000374680 GAGE2EQ4V326 116 aa11.79□□□□□ -0.52
RXRB-201ENST00000374680 COPS9Q8WXC6 57 aa11.79□□□□□ -0.52
RXRB-201ENST00000374680 GAGE2DQ9UEU5 116 aa11.79□□□□□ -0.52
RXRB-201ENST00000374680 FBN1P35555 2871 aaKnown RBP11.79□□□□□ -0.52
RXRB-201ENST00000374680 A0A087WYN8 130 aa11.78□□□□□ -0.52
RXRB-201ENST00000374680 C9orf66Q5T8R8 295 aa11.78□□□□□ -0.52
RXRB-201ENST00000374680 TRAV13-2A0A0B4J235 113 aa11.76□□□□□ -0.53
RXRB-201ENST00000374680 ANAPC13Q9BS18 74 aa11.76□□□□□ -0.53
RXRB-201ENST00000374680 MALP21145 153 aa11.75□□□□□ -0.53
RXRB-201ENST00000374680 C9orf129Q5T035 196 aaKnown RBP11.74□□□□□ -0.53
RXRB-201ENST00000374680 CHCHD10Q8WYQ3 142 aaPredicted RBP11.74□□□□□ -0.53
RXRB-201ENST00000374680 C6orf223Q8N319 242 aa11.73□□□□□ -0.53
RXRB-201ENST00000374680 TENM3Q9P273 2699 aa11.73□□□□□ -0.53
RXRB-201ENST00000374680 IBA57-AS1B1ANH7 110 aa11.73□□□□□ -0.53
RXRB-201ENST00000374680 LECT2O14960 151 aa11.73□□□□□ -0.53
RXRB-201ENST00000374680 REG3AQ06141 175 aa11.73□□□□□ -0.53
RXRB-201ENST00000374680 LINC00612Q8N6U2 182 aa11.73□□□□□ -0.53
RXRB-201ENST00000374680 DNAL4O96015 105 aa11.73□□□□□ -0.53
RXRB-201ENST00000374680 OXLD1Q5BKU9 147 aa11.73□□□□□ -0.53
RXRB-201ENST00000374680 CITED1Q99966 193 aa11.73□□□□□ -0.53
RXRB-201ENST00000374680 RETNQ9HD89 108 aa11.72□□□□□ -0.53
RXRB-201ENST00000374680 KLK12Q9UKR0 248 aa11.72□□□□□ -0.53
RXRB-201ENST00000374680 IGHV4-30-4P0DP06 118 aa11.71□□□□□ -0.54
RXRB-201ENST00000374680 GAGE2AQ6NT46 116 aa11.71□□□□□ -0.54
RXRB-201ENST00000374680 CFAP161Q6P656 301 aa11.71□□□□□ -0.54
RXRB-201ENST00000374680 RPL28P46779 137 aaKnown RBP11.7□□□□□ -0.54
RXRB-201ENST00000374680 SMIM9A6NGZ8 99 aa11.7□□□□□ -0.54
RXRB-201ENST00000374680 APOC4P55056 127 aa11.7□□□□□ -0.54
RXRB-201ENST00000374680 LINC01600Q96MT4 127 aa11.7□□□□□ -0.54
RXRB-201ENST00000374680 C22orf24Q9Y442 160 aa11.7□□□□□ -0.54
RXRB-201ENST00000374680 A0A1B0GUV1 79 aa11.69□□□□□ -0.54
RXRB-201ENST00000374680 LYRM9A8MSI8 78 aa11.69□□□□□ -0.54
RXRB-201ENST00000374680 NCR3O14931 201 aa11.68□□□□□ -0.54
RXRB-201ENST00000374680 TRACP01848 142 aa11.68□□□□□ -0.54
RXRB-201ENST00000374680 C10orf25Q5T742 122 aa11.68□□□□□ -0.54
RXRB-201ENST00000374680 C14orf132Q9NPU4 83 aa11.68□□□□□ -0.54
RXRB-201ENST00000374680 Q8NAQ8 132 aa11.67□□□□□ -0.54
RXRB-201ENST00000374680 UNQ6190/PRO20217Q6UXQ8 127 aa11.67□□□□□ -0.54
RXRB-201ENST00000374680 SMCR5Q8TEV8 140 aa11.66□□□□□ -0.54
RXRB-201ENST00000374680 COL6A5A8TX70 2615 aa11.66□□□□□ -0.54
RXRB-201ENST00000374680 SPART-AS1P0CW21 52 aa11.66□□□□□ -0.54
RXRB-201ENST00000374680 NDUFV3P56181 108 aaKnown RBP11.66□□□□□ -0.54
RXRB-201ENST00000374680 CD164L2Q6UWJ8 174 aa11.66□□□□□ -0.54
RXRB-201ENST00000374680 Q8IZM0 81 aa11.65□□□□□ -0.54
RXRB-201ENST00000374680 NHLRC4P0CG21 123 aaPredicted RBP11.65□□□□□ -0.54
RXRB-201ENST00000374680 KIAA0087Q14695 138 aa11.64□□□□□ -0.55
RXRB-201ENST00000374680 Q8NDZ9 215 aa11.64□□□□□ -0.55
RXRB-201ENST00000374680 C3orf56Q8N813 242 aa11.63□□□□□ -0.55
RXRB-201ENST00000374680 NBEAL1Q6ZS30 2694 aa11.63□□□□□ -0.55
RXRB-201ENST00000374680 B5MCH6 92 aa11.63□□□□□ -0.55
RXRB-201ENST00000374680 MRPL23Q16540 153 aaKnown RBP11.63□□□□□ -0.55
RXRB-201ENST00000374680 Q6Q795 121 aa11.62□□□□□ -0.55
RXRB-201ENST00000374680 CCDC179H3BU77 68 aa11.61□□□□□ -0.55
RXRB-201ENST00000374680 DEFB121Q5J5C9 76 aa11.61□□□□□ -0.55
RXRB-201ENST00000374680 SPAG11BQ08648 103 aa11.6□□□□□ -0.55
RXRB-201ENST00000374680 XAGE1AQ9HD64 81 aa11.6□□□□□ -0.55
RXRB-201ENST00000374680 MIFP14174 115 aa11.59□□□□□ -0.55
RXRB-201ENST00000374680 ANK2Q01484 3957 aa11.59□□□□□ -0.55
RXRB-201ENST00000374680 CYSRT1A8MQ03 144 aa11.59□□□□□ -0.55
RXRB-201ENST00000374680 HIGD2BQ4VC39 106 aa11.59□□□□□ -0.55
RXRB-201ENST00000374680 H0YGX0 51 aa11.58□□□□□ -0.56
RXRB-201ENST00000374680 NANOS2P60321 138 aaKnown RBP11.58□□□□□ -0.56
RXRB-201ENST00000374680 S100A7L2Q5SY68 101 aa11.58□□□□□ -0.56
RXRB-201ENST00000374680 C6orf99Q4VX62 202 aa11.57□□□□□ -0.56
RXRB-201ENST00000374680 FAM240AA0A1B0GVK7 77 aa11.57□□□□□ -0.56
RXRB-201ENST00000374680 WFDC10BQ8IUB3 73 aa11.57□□□□□ -0.56
RXRB-201ENST00000374680 SS18L2Q9UHA2 77 aa11.56□□□□□ -0.56
RXRB-201ENST00000374680 RPL18AQ02543 176 aaKnown RBP11.56□□□□□ -0.56
RXRB-201ENST00000374680 ENHOQ6UWT2 76 aa11.56□□□□□ -0.56
RXRB-201ENST00000374680 FAM236AA0A1B0GUQ0 79 aa11.56□□□□□ -0.56
RXRB-201ENST00000374680 FAM236BA0A1B0GV22 79 aa11.56□□□□□ -0.56
RXRB-201ENST00000374680 PRB2P02812 416 aaPredicted RBP11.56□□□□□ -0.56
RXRB-201ENST00000374680 IGKV3D-7A0A0C4DH55 119 aa11.55□□□□□ -0.56
RXRB-201ENST00000374680 LELP1Q5T871 98 aa11.55□□□□□ -0.56
RXRB-201ENST00000374680 Q6ZTC4 211 aa11.55□□□□□ -0.56
RXRB-201ENST00000374680 KRTAP10-11P60412 298 aa11.55□□□□□ -0.56
RXRB-201ENST00000374680 LYPD5Q6UWN5 251 aa11.55□□□□□ -0.56
RXRB-201ENST00000374680 INAFM2P0DMQ5 153 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms