RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 KLK5Q9Y337 293 aaPredicted RBP6.04□□□□□ -1.44
SNRNP40-202ENST00000373720 NOTCH2Q04721 2471 aa6.04□□□□□ -1.44
SNRNP40-202ENST00000373720 A0A1B0GX51 115 aa6.03□□□□□ -1.44
SNRNP40-202ENST00000373720 TCL1BO95988 128 aa6.03□□□□□ -1.44
SNRNP40-202ENST00000373720 TRACP01848 142 aa6.03□□□□□ -1.44
SNRNP40-202ENST00000373720 SCGB1A1P11684 91 aa6.03□□□□□ -1.44
SNRNP40-202ENST00000373720 CKS1BP61024 79 aa6.03□□□□□ -1.44
SNRNP40-202ENST00000373720 CFAP161Q6P656 301 aa6.03□□□□□ -1.44
SNRNP40-202ENST00000373720 NAA38Q9BRA0 125 aaKnown RBP6.03□□□□□ -1.44
SNRNP40-202ENST00000373720 H3BQ85 93 aa6.02□□□□□ -1.45
SNRNP40-202ENST00000373720 LST1O00453 97 aa6.02□□□□□ -1.45
SNRNP40-202ENST00000373720 SLC25A20O43772 301 aa6.02□□□□□ -1.45
SNRNP40-202ENST00000373720 RPL13AP40429 203 aaKnown RBP6.02□□□□□ -1.45
SNRNP40-202ENST00000373720 RPL28P46779 137 aaKnown RBP6.02□□□□□ -1.45
SNRNP40-202ENST00000373720 REG3AQ06141 175 aa6.02□□□□□ -1.45
SNRNP40-202ENST00000373720 FOXI1Q12951 378 aa6.02□□□□□ -1.45
SNRNP40-202ENST00000373720 WFDC2Q14508 124 aa6.02□□□□□ -1.45
SNRNP40-202ENST00000373720 LINC01620Q4KN68 170 aa6.02□□□□□ -1.45
SNRNP40-202ENST00000373720 ANKRD29Q8N6D5 301 aa6.02□□□□□ -1.45
SNRNP40-202ENST00000373720 SETD2Q9BYW2 2564 aaPredicted RBP6.02□□□□□ -1.45
SNRNP40-202ENST00000373720 FN1P02751 2386 aaKnown RBP6.01□□□□□ -1.45
SNRNP40-202ENST00000373720 GVQW2A0A096LPI5 108 aaPredicted RBP6.01□□□□□ -1.45
SNRNP40-202ENST00000373720 CRPP02741 224 aa6.01□□□□□ -1.45
SNRNP40-202ENST00000373720 ANGP03950 147 aaKnown RBP6.01□□□□□ -1.45
SNRNP40-202ENST00000373720 MALP21145 153 aa6.01□□□□□ -1.45
SNRNP40-202ENST00000373720 KRTAP24-1Q3LI83 254 aa6.01□□□□□ -1.45
SNRNP40-202ENST00000373720 ETDBQ3ZM63 59 aa6.01□□□□□ -1.45
SNRNP40-202ENST00000373720 A0A096LPF7 62 aa6□□□□□ -1.45
SNRNP40-202ENST00000373720 A0A0J9YWU9 116 aa6□□□□□ -1.45
SNRNP40-202ENST00000373720 TRIAP1O43715 76 aa6□□□□□ -1.45
SNRNP40-202ENST00000373720 ACYP1P07311 99 aa6□□□□□ -1.45
SNRNP40-202ENST00000373720 LINC00158P58513 81 aa6□□□□□ -1.45
SNRNP40-202ENST00000373720 C21orf62-AS1Q17RA5 79 aa6□□□□□ -1.45
SNRNP40-202ENST00000373720 C15orf53Q8NAA6 179 aa6□□□□□ -1.45
SNRNP40-202ENST00000373720 SPATA25Q9BR10 227 aa6□□□□□ -1.45
SNRNP40-202ENST00000373720 KRTAP4-2Q9BYR5 136 aa6□□□□□ -1.45
SNRNP40-202ENST00000373720 SND1-IT1Q9HBX3 110 aa6□□□□□ -1.45
SNRNP40-202ENST00000373720 HIVEP1P15822 2718 aa6□□□□□ -1.45
SNRNP40-202ENST00000373720 LYPD5Q6UWN5 251 aa5.99□□□□□ -1.45
SNRNP40-202ENST00000373720 LINC00269Q8N2A0 174 aa5.99□□□□□ -1.45
SNRNP40-202ENST00000373720 MIR7-3HGQ8N6C7 128 aa5.99□□□□□ -1.45
SNRNP40-202ENST00000373720 CHCHD10Q8WYQ3 142 aaPredicted RBP5.99□□□□□ -1.45
SNRNP40-202ENST00000373720 TOMM7Q9P0U1 55 aa5.99□□□□□ -1.45
SNRNP40-202ENST00000373720 TEP1Q99973 2627 aaKnown RBP5.98□□□□□ -1.45
SNRNP40-202ENST00000373720 FAM240AA0A1B0GVK7 77 aa5.98□□□□□ -1.45
SNRNP40-202ENST00000373720 C9JAW5 83 aa5.98□□□□□ -1.45
SNRNP40-202ENST00000373720 XCL1P47992 114 aa5.98□□□□□ -1.45
SNRNP40-202ENST00000373720 C5orf38Q86SI9 138 aa5.98□□□□□ -1.45
SNRNP40-202ENST00000373720 SIGMAR1Q99720 223 aa5.98□□□□□ -1.45
SNRNP40-202ENST00000373720 TMEM126AQ9H061 195 aa5.98□□□□□ -1.45
SNRNP40-202ENST00000373720 JMJD1CQ15652 2540 aa5.97□□□□□ -1.45
SNRNP40-202ENST00000373720 EIF4EBP3O60516 100 aaPredicted RBP5.97□□□□□ -1.45
SNRNP40-202ENST00000373720 RNF151Q2KHN1 245 aa5.97□□□□□ -1.45
SNRNP40-202ENST00000373720 DEFB121Q5J5C9 76 aa5.97□□□□□ -1.45
SNRNP40-202ENST00000373720 C11orf45Q8TAV5 145 aa5.97□□□□□ -1.45
SNRNP40-202ENST00000373720 CELA1Q9UNI1 258 aa5.97□□□□□ -1.45
SNRNP40-202ENST00000373720 TRAV10A0A0B4J240 114 aa5.96□□□□□ -1.46
SNRNP40-202ENST00000373720 GAGE12HA6NDE8 117 aa5.96□□□□□ -1.46
SNRNP40-202ENST00000373720 H7C2G1 150 aa5.96□□□□□ -1.46
SNRNP40-202ENST00000373720 INAFM2P0DMQ5 153 aa5.96□□□□□ -1.46
SNRNP40-202ENST00000373720 KIAA0087Q14695 138 aa5.96□□□□□ -1.46
SNRNP40-202ENST00000373720 LINC01556Q5JQF7 62 aa5.96□□□□□ -1.46
SNRNP40-202ENST00000373720 KPRPQ5T749 579 aaPredicted RBP5.96□□□□□ -1.46
SNRNP40-202ENST00000373720 C2orf82Q6UX34 121 aa5.96□□□□□ -1.46
SNRNP40-202ENST00000373720 MTURNQ8N3F0 131 aa5.96□□□□□ -1.46
SNRNP40-202ENST00000373720 C2orf48Q96LS8 159 aa5.96□□□□□ -1.46
SNRNP40-202ENST00000373720 IGKV3OR2-268A0A0C4DH90 116 aa5.95□□□□□ -1.46
SNRNP40-202ENST00000373720 CCL18P55774 89 aa5.95□□□□□ -1.46
SNRNP40-202ENST00000373720 KRTAP10-11P60412 298 aa5.95□□□□□ -1.46
SNRNP40-202ENST00000373720 SOSTDC1Q6X4U4 206 aa5.95□□□□□ -1.46
SNRNP40-202ENST00000373720 SPATA3Q8NHX4 192 aa5.95□□□□□ -1.46
SNRNP40-202ENST00000373720 DNAL4O96015 105 aa5.94□□□□□ -1.46
SNRNP40-202ENST00000373720 UBE2WQ96B02 151 aa5.94□□□□□ -1.46
SNRNP40-202ENST00000373720 RMI2Q96E14 147 aa5.94□□□□□ -1.46
SNRNP40-202ENST00000373720 TM2D3Q9BRN9 247 aa5.94□□□□□ -1.46
SNRNP40-202ENST00000373720 DEFB131BA0A096LNP1 70 aa5.93□□□□□ -1.46
SNRNP40-202ENST00000373720 DEFB4AO15263 64 aa5.93□□□□□ -1.46
SNRNP40-202ENST00000373720 HTN3P15516 51 aa5.93□□□□□ -1.46
SNRNP40-202ENST00000373720 DAND5Q8N907 189 aa5.93□□□□□ -1.46
SNRNP40-202ENST00000373720 NOTCH3Q9UM47 2321 aa5.93□□□□□ -1.46
SNRNP40-202ENST00000373720 CUBNO60494 3623 aa5.93□□□□□ -1.46
SNRNP40-202ENST00000373720 ATRQ13535 2644 aa5.92□□□□□ -1.46
SNRNP40-202ENST00000373720 TRBV7-6A0A0J9YX20 115 aa5.92□□□□□ -1.46
SNRNP40-202ENST00000373720 DNAH10OSP0CZ25 163 aa5.92□□□□□ -1.46
SNRNP40-202ENST00000373720 PFN2P35080 140 aa5.92□□□□□ -1.46
SNRNP40-202ENST00000373720 NPC2P61916 151 aa5.92□□□□□ -1.46
SNRNP40-202ENST00000373720 SPAG11BQ08648 103 aa5.92□□□□□ -1.46
SNRNP40-202ENST00000373720 NIPBLQ6KC79 2804 aaeCLIP5.91□□□□□ -1.46
SNRNP40-202ENST00000373720 IGKV2-28A0A075B6P5 120 aa5.91□□□□□ -1.46
SNRNP40-202ENST00000373720 ZNF561-AS1K7EIQ3 104 aa5.91□□□□□ -1.46
SNRNP40-202ENST00000373720 IGKV2D-28P01615 120 aa5.91□□□□□ -1.46
SNRNP40-202ENST00000373720 PCP4P48539 62 aa5.91□□□□□ -1.46
SNRNP40-202ENST00000373720 LCE4AQ5TA78 99 aa5.91□□□□□ -1.46
SNRNP40-202ENST00000373720 ENHOQ6UWT2 76 aa5.91□□□□□ -1.46
SNRNP40-202ENST00000373720 NTN5Q8WTR8 489 aaPredicted RBP5.91□□□□□ -1.46
SNRNP40-202ENST00000373720 C1orf43Q9BWL3 253 aa5.91□□□□□ -1.46
SNRNP40-202ENST00000373720 KLK12Q9UKR0 248 aa5.91□□□□□ -1.46
SNRNP40-202ENST00000373720 A0A0U1RRA0 63 aa5.9□□□□□ -1.46
SNRNP40-202ENST00000373720 Q6ZTC4 211 aa5.9□□□□□ -1.46
SNRNP40-202ENST00000373720 LINC00337Q8N6G1 96 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms