RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 TEX49A0A1B0GTD5 131 aa12.89□□□□□ -0.35
USP49-202ENST00000373010 SPART-AS1P0CW21 52 aa12.89□□□□□ -0.35
USP49-202ENST00000373010 SND1-IT1Q9HBX3 110 aa12.89□□□□□ -0.35
USP49-202ENST00000373010 F8P00451 2351 aa12.89□□□□□ -0.35
USP49-202ENST00000373010 IBA57-AS1B1ANH7 110 aa12.88□□□□□ -0.35
USP49-202ENST00000373010 COX7A2LO14548 114 aa12.88□□□□□ -0.35
USP49-202ENST00000373010 IGKV2-28A0A075B6P5 120 aa12.88□□□□□ -0.35
USP49-202ENST00000373010 IGKV2D-28P01615 120 aa12.88□□□□□ -0.35
USP49-202ENST00000373010 CCL18P55774 89 aa12.88□□□□□ -0.35
USP49-202ENST00000373010 IGLV10-54A0A075B6I4 117 aa12.87□□□□□ -0.35
USP49-202ENST00000373010 ANGP03950 147 aaKnown RBP12.87□□□□□ -0.35
USP49-202ENST00000373010 OXLD1Q5BKU9 147 aa12.87□□□□□ -0.35
USP49-202ENST00000373010 LINC00337Q8N6G1 96 aa12.87□□□□□ -0.35
USP49-202ENST00000373010 H3BT86 120 aa12.86□□□□□ -0.35
USP49-202ENST00000373010 CRPP02741 224 aa12.85□□□□□ -0.35
USP49-202ENST00000373010 CHCHD10Q8WYQ3 142 aaPredicted RBP12.85□□□□□ -0.35
USP49-202ENST00000373010 UBE2WQ96B02 151 aa12.85□□□□□ -0.35
USP49-202ENST00000373010 TRAV13-2A0A0B4J235 113 aa12.84□□□□□ -0.35
USP49-202ENST00000373010 REG3AQ06141 175 aa12.84□□□□□ -0.35
USP49-202ENST00000373010 MRPL23Q16540 153 aaKnown RBP12.84□□□□□ -0.35
USP49-202ENST00000373010 Q8IZM0 81 aa12.84□□□□□ -0.35
USP49-202ENST00000373010 XGP55808 180 aa12.83□□□□□ -0.35
USP49-202ENST00000373010 KRTAP10-11P60412 298 aa12.83□□□□□ -0.36
USP49-202ENST00000373010 CD164L2Q6UWJ8 174 aa12.83□□□□□ -0.36
USP49-202ENST00000373010 MT-ATP8P03928 68 aa12.82□□□□□ -0.36
USP49-202ENST00000373010 RETNQ9HD89 108 aa12.82□□□□□ -0.36
USP49-202ENST00000373010 FAM218AQ96MZ4 157 aa12.82□□□□□ -0.36
USP49-202ENST00000373010 LINC01561Q8N1V8 128 aa12.81□□□□□ -0.36
USP49-202ENST00000373010 RPL28P46779 137 aaKnown RBP12.8□□□□□ -0.36
USP49-202ENST00000373010 KIAA0087Q14695 138 aa12.8□□□□□ -0.36
USP49-202ENST00000373010 SCGB1A1P11684 91 aa12.79□□□□□ -0.36
USP49-202ENST00000373010 CKS1BP61024 79 aa12.79□□□□□ -0.36
USP49-202ENST00000373010 LELP1Q5T871 98 aa12.79□□□□□ -0.36
USP49-202ENST00000373010 KRTAP24-1Q3LI83 254 aa12.79□□□□□ -0.36
USP49-202ENST00000373010 FLNBO75369 2602 aaKnown RBP12.78□□□□□ -0.36
USP49-202ENST00000373010 SMIM11BQ8TCY0 68 aa12.78□□□□□ -0.36
USP49-202ENST00000373010 MALP21145 153 aa12.78□□□□□ -0.36
USP49-202ENST00000373010 CFAP161Q6P656 301 aa12.77□□□□□ -0.37
USP49-202ENST00000373010 TRAV8-4A0A0B4J246 113 aa12.76□□□□□ -0.37
USP49-202ENST00000373010 TRACP01848 142 aa12.76□□□□□ -0.37
USP49-202ENST00000373010 OR13C6PQ8NH95 151 aa12.75□□□□□ -0.37
USP49-202ENST00000373010 KLK12Q9UKR0 248 aa12.75□□□□□ -0.37
USP49-202ENST00000373010 C9orf116Q5BN46 136 aaPredicted RBP12.74□□□□□ -0.37
USP49-202ENST00000373010 LYPD5Q6UWN5 251 aa12.73□□□□□ -0.37
USP49-202ENST00000373010 Q9HAA7 133 aa12.73□□□□□ -0.37
USP49-202ENST00000373010 FBN1P35555 2871 aaKnown RBP12.73□□□□□ -0.37
USP49-202ENST00000373010 PKD1L1Q8TDX9 2849 aa12.73□□□□□ -0.37
USP49-202ENST00000373010 STAB1Q9NY15 2570 aa12.73□□□□□ -0.37
USP49-202ENST00000373010 BAALC-AS2P0C853 105 aa12.72□□□□□ -0.37
USP49-202ENST00000373010 DEFB121Q5J5C9 76 aa12.72□□□□□ -0.37
USP49-202ENST00000373010 PRR3P79522 188 aaKnown RBP12.71□□□□□ -0.37
USP49-202ENST00000373010 A0A087WYN8 130 aa12.71□□□□□ -0.38
USP49-202ENST00000373010 CXCL5P42830 114 aa12.71□□□□□ -0.38
USP49-202ENST00000373010 C6orf223Q8N319 242 aa12.71□□□□□ -0.38
USP49-202ENST00000373010 C3orf56Q8N813 242 aa12.71□□□□□ -0.38
USP49-202ENST00000373010 LINC00526Q96FQ7 95 aa12.71□□□□□ -0.38
USP49-202ENST00000373010 ENHOQ6UWT2 76 aa12.7□□□□□ -0.38
USP49-202ENST00000373010 PRR34Q9NV39 138 aa12.7□□□□□ -0.38
USP49-202ENST00000373010 C22orf24Q9Y442 160 aa12.7□□□□□ -0.38
USP49-202ENST00000373010 EGFEM1PQ0D2K5 195 aa12.69□□□□□ -0.38
USP49-202ENST00000373010 C10orf25Q5T742 122 aa12.69□□□□□ -0.38
USP49-202ENST00000373010 Q6ZTC4 211 aa12.69□□□□□ -0.38
USP49-202ENST00000373010 SPAG11BQ08648 103 aa12.68□□□□□ -0.38
USP49-202ENST00000373010 KPRPQ5T749 579 aaPredicted RBP12.68□□□□□ -0.38
USP49-202ENST00000373010 KLK5Q9Y337 293 aaPredicted RBP12.68□□□□□ -0.38
USP49-202ENST00000373010 COX17Q14061 63 aa12.68□□□□□ -0.38
USP49-202ENST00000373010 UNQ6190/PRO20217Q6UXQ8 127 aa12.68□□□□□ -0.38
USP49-202ENST00000373010 TENM3Q9P273 2699 aa12.66□□□□□ -0.38
USP49-202ENST00000373010 WFDC10BQ8IUB3 73 aa12.66□□□□□ -0.38
USP49-202ENST00000373010 CMYA5Q8N3K9 4069 aa12.66□□□□□ -0.38
USP49-202ENST00000373010 H0YGX0 51 aa12.66□□□□□ -0.38
USP49-202ENST00000373010 Q8NDZ9 215 aa12.64□□□□□ -0.39
USP49-202ENST00000373010 CYSRT1A8MQ03 144 aa12.63□□□□□ -0.39
USP49-202ENST00000373010 DNAL4O96015 105 aa12.63□□□□□ -0.39
USP49-202ENST00000373010 NANOS2P60321 138 aaKnown RBP12.63□□□□□ -0.39
USP49-202ENST00000373010 C15orf53Q8NAA6 179 aa12.63□□□□□ -0.39
USP49-202ENST00000373010 LECT2O14960 151 aa12.63□□□□□ -0.39
USP49-202ENST00000373010 ANK2Q01484 3957 aa12.63□□□□□ -0.39
USP49-202ENST00000373010 A0A0J9YWU9 116 aa12.62□□□□□ -0.39
USP49-202ENST00000373010 SNCGO76070 127 aa12.62□□□□□ -0.39
USP49-202ENST00000373010 MAST4O15021 2626 aa12.62□□□□□ -0.39
USP49-202ENST00000373010 H3BNG1 76 aa12.62□□□□□ -0.39
USP49-202ENST00000373010 NDUFC2O95298 119 aa12.62□□□□□ -0.39
USP49-202ENST00000373010 FAM240AA0A1B0GVK7 77 aa12.61□□□□□ -0.39
USP49-202ENST00000373010 NCR3O14931 201 aa12.61□□□□□ -0.39
USP49-202ENST00000373010 TTC32Q5I0X7 151 aa12.61□□□□□ -0.39
USP49-202ENST00000373010 SLPIP03973 132 aa12.6□□□□□ -0.39
USP49-202ENST00000373010 ESRGQ1W209 222 aa12.59□□□□□ -0.39
USP49-202ENST00000373010 C9orf129Q5T035 196 aaKnown RBP12.58□□□□□ -0.4
USP49-202ENST00000373010 TMEM126AQ9H061 195 aa12.57□□□□□ -0.4
USP49-202ENST00000373010 DEFB131BA0A096LNP1 70 aa12.56□□□□□ -0.4
USP49-202ENST00000373010 GAGE2BQ13066 116 aa12.56□□□□□ -0.4
USP49-202ENST00000373010 GAGE2EQ4V326 116 aa12.56□□□□□ -0.4
USP49-202ENST00000373010 C6orf48Q9UBA6 75 aa12.56□□□□□ -0.4
USP49-202ENST00000373010 GAGE2DQ9UEU5 116 aa12.56□□□□□ -0.4
USP49-202ENST00000373010 NOTCH1P46531 2555 aa12.55□□□□□ -0.4
USP49-202ENST00000373010 C11orf45Q8TAV5 145 aa12.55□□□□□ -0.4
USP49-202ENST00000373010 HIGD2BQ4VC39 106 aa12.54□□□□□ -0.4
USP49-202ENST00000373010 KRTAP26-1Q6PEX3 210 aa12.54□□□□□ -0.4
USP49-202ENST00000373010 A0A1B0GV72 72 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms