RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 A8MTW9 85 aa6.98□□□□□ -1.29
COL4A6-202ENST00000372216 C1orf195Q5TG92 126 aa6.98□□□□□ -1.29
COL4A6-202ENST00000372216 C7orf65Q6ZTY9 151 aa6.98□□□□□ -1.29
COL4A6-202ENST00000372216 Q9UF83 564 aa6.98□□□□□ -1.29
COL4A6-202ENST00000372216 SPG11Q96JI7 2443 aa6.97□□□□□ -1.29
COL4A6-202ENST00000372216 SOSTDC1Q6X4U4 206 aa6.97□□□□□ -1.29
COL4A6-202ENST00000372216 NHLRC4P0CG21 123 aaPredicted RBP6.97□□□□□ -1.29
COL4A6-202ENST00000372216 LINC00694P0DN24 101 aa6.96□□□□□ -1.29
COL4A6-202ENST00000372216 LINC00242Q5T6M2 205 aa6.96□□□□□ -1.29
COL4A6-202ENST00000372216 IGIPA6NJ69 53 aa6.96□□□□□ -1.29
COL4A6-202ENST00000372216 Q8N2B8 174 aa6.96□□□□□ -1.3
COL4A6-202ENST00000372216 Q6ZSN1 163 aa6.96□□□□□ -1.3
COL4A6-202ENST00000372216 LYPD5Q6UWN5 251 aa6.95□□□□□ -1.3
COL4A6-202ENST00000372216 FHL3Q13643 280 aa6.95□□□□□ -1.3
COL4A6-202ENST00000372216 CSPG4Q6UVK1 2322 aa6.95□□□□□ -1.3
COL4A6-202ENST00000372216 A0A087WYN8 130 aa6.95□□□□□ -1.3
COL4A6-202ENST00000372216 EGFEM1PQ0D2K5 195 aa6.95□□□□□ -1.3
COL4A6-202ENST00000372216 CRYGAP11844 174 aa6.95□□□□□ -1.3
COL4A6-202ENST00000372216 FAM229AH3BQW9 127 aa6.94□□□□□ -1.3
COL4A6-202ENST00000372216 MUC7Q8TAX7 377 aa6.94□□□□□ -1.3
COL4A6-202ENST00000372216 A0A087WSZ3 146 aa6.94□□□□□ -1.3
COL4A6-202ENST00000372216 C16orf90A8MZG2 172 aa6.94□□□□□ -1.3
COL4A6-202ENST00000372216 HCG22E2RYF7 251 aa6.93□□□□□ -1.3
COL4A6-202ENST00000372216 WNK1Q9H4A3 2382 aa6.93□□□□□ -1.3
COL4A6-202ENST00000372216 NOTCH2Q04721 2471 aa6.93□□□□□ -1.3
COL4A6-202ENST00000372216 SMIM1B2RUZ4 78 aa6.93□□□□□ -1.3
COL4A6-202ENST00000372216 SRCAPQ6ZRS2 3230 aa6.93□□□□□ -1.3
COL4A6-202ENST00000372216 HIVEP3Q5T1R4 2406 aa6.92□□□□□ -1.3
COL4A6-202ENST00000372216 PLXNB1O43157 2135 aa6.92□□□□□ -1.3
COL4A6-202ENST00000372216 PSPHP1O15172 72 aa6.92□□□□□ -1.3
COL4A6-202ENST00000372216 ATP5EP2Q5VTU8 51 aa6.92□□□□□ -1.3
COL4A6-202ENST00000372216 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.92□□□□□ -1.3
COL4A6-202ENST00000372216 H0Y9P7 68 aa6.91□□□□□ -1.3
COL4A6-202ENST00000372216 UQCRQO14949 82 aa6.91□□□□□ -1.3
COL4A6-202ENST00000372216 MOBPQ13875 183 aa6.91□□□□□ -1.3
COL4A6-202ENST00000372216 C2orf91Q6ZV80 131 aa6.91□□□□□ -1.3
COL4A6-202ENST00000372216 IGF2RP11717 2491 aa6.9□□□□□ -1.3
COL4A6-202ENST00000372216 NCOR2Q9Y618 2525 aa6.9□□□□□ -1.3
COL4A6-202ENST00000372216 KRTAP24-1Q3LI83 254 aa6.9□□□□□ -1.3
COL4A6-202ENST00000372216 LINC00575Q6W349 94 aa6.9□□□□□ -1.31
COL4A6-202ENST00000372216 Q6ZRU5 148 aa6.9□□□□□ -1.31
COL4A6-202ENST00000372216 LIMD2Q9BT23 127 aa6.9□□□□□ -1.31
COL4A6-202ENST00000372216 IGLV8-61A0A075B6I0 122 aa6.89□□□□□ -1.31
COL4A6-202ENST00000372216 A0A087WVE0 104 aa6.89□□□□□ -1.31
COL4A6-202ENST00000372216 COX8CQ7Z4L0 72 aa6.89□□□□□ -1.31
COL4A6-202ENST00000372216 Q8N814 137 aa6.89□□□□□ -1.31
COL4A6-202ENST00000372216 COX6B2Q6YFQ2 88 aa6.88□□□□□ -1.31
COL4A6-202ENST00000372216 NAV2Q8IVL1 2488 aa6.88□□□□□ -1.31
COL4A6-202ENST00000372216 CSDC2Q9Y534 153 aaKnown RBP6.88□□□□□ -1.31
COL4A6-202ENST00000372216 CCDC179H3BU77 68 aa6.88□□□□□ -1.31
COL4A6-202ENST00000372216 F8WDY8 70 aa6.88□□□□□ -1.31
COL4A6-202ENST00000372216 SMCR5Q8TEV8 140 aa6.88□□□□□ -1.31
COL4A6-202ENST00000372216 URB1-AS1Q96HZ7 61 aa6.88□□□□□ -1.31
COL4A6-202ENST00000372216 A0A1B0GUV1 79 aa6.87□□□□□ -1.31
COL4A6-202ENST00000372216 AMELXQ99217 191 aa6.87□□□□□ -1.31
COL4A6-202ENST00000372216 TSPEAR-AS2P59090 65 aa6.87□□□□□ -1.31
COL4A6-202ENST00000372216 NTM-AS1Q6ZSK4 140 aa6.87□□□□□ -1.31
COL4A6-202ENST00000372216 TET2Q6N021 2002 aaPredicted RBP6.87□□□□□ -1.31
COL4A6-202ENST00000372216 C22orf24Q9Y442 160 aa6.86□□□□□ -1.31
COL4A6-202ENST00000372216 NAV3Q8IVL0 2385 aa6.86□□□□□ -1.31
COL4A6-202ENST00000372216 ATRXP46100 2492 aa6.86□□□□□ -1.31
COL4A6-202ENST00000372216 PHF5AQ7RTV0 110 aaKnown RBP6.86□□□□□ -1.31
COL4A6-202ENST00000372216 PIEZO2Q9H5I5 2752 aa6.85□□□□□ -1.31
COL4A6-202ENST00000372216 C11orf72Q8NBR9 251 aa6.85□□□□□ -1.31
COL4A6-202ENST00000372216 TYMSOSQ8TAI1 123 aa6.84□□□□□ -1.31
COL4A6-202ENST00000372216 RTL8CO15255 209 aa6.84□□□□□ -1.31
COL4A6-202ENST00000372216 PTPRBP23467 1997 aa6.84□□□□□ -1.32
COL4A6-202ENST00000372216 hDV103S1A0JD37 113 aa6.84□□□□□ -1.32
COL4A6-202ENST00000372216 ADAMTSL4-AS1Q5T5F5 129 aa6.83□□□□□ -1.32
COL4A6-202ENST00000372216 COL27A1Q8IZC6 1860 aaPredicted RBP6.83□□□□□ -1.32
COL4A6-202ENST00000372216 LINC00310P59036 64 aa6.83□□□□□ -1.32
COL4A6-202ENST00000372216 PMAIP1Q13794 54 aa6.82□□□□□ -1.32
COL4A6-202ENST00000372216 LINC01561Q8N1V8 128 aa6.82□□□□□ -1.32
COL4A6-202ENST00000372216 CACNA1AO00555 2505 aa6.82□□□□□ -1.32
COL4A6-202ENST00000372216 Q96NJ1 140 aa6.82□□□□□ -1.32
COL4A6-202ENST00000372216 NDUFC1O43677 76 aa6.8□□□□□ -1.32
COL4A6-202ENST00000372216 Q8N3U1 123 aa6.8□□□□□ -1.32
COL4A6-202ENST00000372216 SONP18583 2426 aaKnown RBP6.8□□□□□ -1.32
COL4A6-202ENST00000372216 TRBV7-7A0A0K0K1E9 115 aa6.8□□□□□ -1.32
COL4A6-202ENST00000372216 Q6JHZ5 121 aa6.8□□□□□ -1.32
COL4A6-202ENST00000372216 SORL1Q92673 2214 aa6.8□□□□□ -1.32
COL4A6-202ENST00000372216 FAM19A4Q96LR4 140 aa6.8□□□□□ -1.32
COL4A6-202ENST00000372216 ATP5EP56381 51 aaPredicted RBP6.79□□□□□ -1.32
COL4A6-202ENST00000372216 KIAA0087Q14695 138 aa6.79□□□□□ -1.32
COL4A6-202ENST00000372216 C9orf92A6NGG3 77 aa6.79□□□□□ -1.32
COL4A6-202ENST00000372216 LINC00315P59091 139 aa6.79□□□□□ -1.32
COL4A6-202ENST00000372216 PCSK5Q92824 1860 aa6.79□□□□□ -1.32
COL4A6-202ENST00000372216 SMR3BP02814 79 aaPredicted RBP6.79□□□□□ -1.32
COL4A6-202ENST00000372216 CCDC168Q8NDH2 2452 aa6.78□□□□□ -1.32
COL4A6-202ENST00000372216 KIF25-AS1Q9Y6Z4 181 aa6.78□□□□□ -1.32
COL4A6-202ENST00000372216 C1orf64Q8NEQ6 169 aa6.78□□□□□ -1.32
COL4A6-202ENST00000372216 A0A096LNJ9 63 aa6.78□□□□□ -1.32
COL4A6-202ENST00000372216 RPL37AP61513 92 aaKnown RBP6.78□□□□□ -1.32
COL4A6-202ENST00000372216 PIEZO1Q92508 2521 aa6.77□□□□□ -1.33
COL4A6-202ENST00000372216 SMIM29Q86T20 159 aa6.77□□□□□ -1.33
COL4A6-202ENST00000372216 MUC4Q99102 2169 aa6.77□□□□□ -1.33
COL4A6-202ENST00000372216 COX7CP15954 63 aa6.76□□□□□ -1.33
COL4A6-202ENST00000372216 AGRNO00468 2067 aa6.76□□□□□ -1.33
COL4A6-202ENST00000372216 ATP11AUNQ6ZP68 121 aa6.76□□□□□ -1.33
COL4A6-202ENST00000372216 A0A1B0GU69 56 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms