RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 ANGP03950 147 aaKnown RBP8.84□□□□□ -0.99
LDB3-203ENST00000372056 IFITM1P13164 125 aa8.84□□□□□ -0.99
LDB3-203ENST00000372056 PRO1854Q9UHT4 67 aa8.84□□□□□ -0.99
LDB3-203ENST00000372056 REG3AQ06141 175 aa8.83□□□□□ -1
LDB3-203ENST00000372056 DAND5Q8N907 189 aa8.83□□□□□ -1
LDB3-203ENST00000372056 SMCPP49901 116 aaPredicted RBP8.83□□□□□ -1
LDB3-203ENST00000372056 ESRGQ1W209 222 aa8.83□□□□□ -1
LDB3-203ENST00000372056 TOMM7Q9P0U1 55 aa8.83□□□□□ -1
LDB3-203ENST00000372056 FOXI1Q12951 378 aa8.82□□□□□ -1
LDB3-203ENST00000372056 LINC01561Q8N1V8 128 aa8.82□□□□□ -1
LDB3-203ENST00000372056 UPK3BQ9BT76 320 aa8.82□□□□□ -1
LDB3-203ENST00000372056 TRAV8-4A0A0B4J246 113 aa8.81□□□□□ -1
LDB3-203ENST00000372056 NPC2P61916 151 aa8.81□□□□□ -1
LDB3-203ENST00000372056 LINC01556Q5JQF7 62 aa8.81□□□□□ -1
LDB3-203ENST00000372056 MEIG1Q5JSS6 88 aa8.81□□□□□ -1
LDB3-203ENST00000372056 CD164L2Q6UWJ8 174 aa8.81□□□□□ -1
LDB3-203ENST00000372056 DNHD1Q96M86 4753 aa8.81□□□□□ -1
LDB3-203ENST00000372056 IGHV3-33P01772 117 aa8.81□□□□□ -1
LDB3-203ENST00000372056 LINC00308Q8TCZ7 52 aa8.81□□□□□ -1
LDB3-203ENST00000372056 CHCHD10Q8WYQ3 142 aaPredicted RBP8.81□□□□□ -1
LDB3-203ENST00000372056 A0A0U1RRA0 63 aa8.8□□□□□ -1
LDB3-203ENST00000372056 CDIP1Q9H305 208 aa8.8□□□□□ -1
LDB3-203ENST00000372056 PRR34Q9NV39 138 aa8.8□□□□□ -1
LDB3-203ENST00000372056 DNAH10OSP0CZ25 163 aa8.79□□□□□ -1
LDB3-203ENST00000372056 LYRM7Q5U5X0 104 aa8.79□□□□□ -1
LDB3-203ENST00000372056 IGLV10-54A0A075B6I4 117 aa8.79□□□□□ -1
LDB3-203ENST00000372056 COX7A2LO14548 114 aa8.79□□□□□ -1
LDB3-203ENST00000372056 CRPP02741 224 aa8.79□□□□□ -1
LDB3-203ENST00000372056 SFTA2Q6UW10 78 aa8.79□□□□□ -1
LDB3-203ENST00000372056 MTURNQ8N3F0 131 aa8.79□□□□□ -1
LDB3-203ENST00000372056 COPS9Q8WXC6 57 aa8.79□□□□□ -1
LDB3-203ENST00000372056 ERG28Q9UKR5 140 aa8.79□□□□□ -1
LDB3-203ENST00000372056 LOC107984156A0A0G2JMH3 177 aa8.78□□□□□ -1
LDB3-203ENST00000372056 CKS1BP61024 79 aa8.78□□□□□ -1
LDB3-203ENST00000372056 SOSTDC1Q6X4U4 206 aa8.78□□□□□ -1
LDB3-203ENST00000372056 ARL17AQ8IVW1 177 aa8.78□□□□□ -1
LDB3-203ENST00000372056 Q8IZM0 81 aa8.78□□□□□ -1
LDB3-203ENST00000372056 PPDPFQ9H3Y8 114 aa8.78□□□□□ -1
LDB3-203ENST00000372056 KLK12Q9UKR0 248 aa8.78□□□□□ -1
LDB3-203ENST00000372056 APLNQ9ULZ1 77 aa8.78□□□□□ -1
LDB3-203ENST00000372056 C6orf226Q5I0X4 101 aa8.77□□□□□ -1.01
LDB3-203ENST00000372056 WFDC10BQ8IUB3 73 aa8.77□□□□□ -1.01
LDB3-203ENST00000372056 PPDPFLQ8WWR9 84 aa8.77□□□□□ -1.01
LDB3-203ENST00000372056 TRBV20-1A0A075B6N2 111 aa8.76□□□□□ -1.01
LDB3-203ENST00000372056 IBA57-AS1B1ANH7 110 aa8.76□□□□□ -1.01
LDB3-203ENST00000372056 H7C2G1 150 aa8.76□□□□□ -1.01
LDB3-203ENST00000372056 PSMB2P49721 201 aa8.76□□□□□ -1.01
LDB3-203ENST00000372056 ENHOQ6UWT2 76 aa8.76□□□□□ -1.01
LDB3-203ENST00000372056 CARD19Q96LW7 228 aa8.76□□□□□ -1.01
LDB3-203ENST00000372056 LINC00588Q9Y4M8 146 aa8.76□□□□□ -1.01
LDB3-203ENST00000372056 M0QXV9 152 aa8.75□□□□□ -1.01
LDB3-203ENST00000372056 TEN1Q86WV5 123 aa8.75□□□□□ -1.01
LDB3-203ENST00000372056 RMI2Q96E14 147 aa8.75□□□□□ -1.01
LDB3-203ENST00000372056 WWC2-AS2Q96NR7 200 aa8.75□□□□□ -1.01
LDB3-203ENST00000372056 STAB2Q8WWQ8 2551 aa8.75□□□□□ -1.01
LDB3-203ENST00000372056 KIAA0087Q14695 138 aa8.74□□□□□ -1.01
LDB3-203ENST00000372056 MIR7-3HGQ8N6C7 128 aa8.74□□□□□ -1.01
LDB3-203ENST00000372056 MALP21145 153 aa8.74□□□□□ -1.01
LDB3-203ENST00000372056 Q1RN00 199 aa8.74□□□□□ -1.01
LDB3-203ENST00000372056 UBE2DNLQ8IWF7 75 aa8.74□□□□□ -1.01
LDB3-203ENST00000372056 LINC00158P58513 81 aa8.73□□□□□ -1.01
LDB3-203ENST00000372056 C2orf82Q6UX34 121 aa8.73□□□□□ -1.01
LDB3-203ENST00000372056 MUC7Q8TAX7 377 aa8.73□□□□□ -1.01
LDB3-203ENST00000372056 TRBV30A0A0K0K1B3 111 aa8.72□□□□□ -1.01
LDB3-203ENST00000372056 TCL1BO95988 128 aa8.72□□□□□ -1.01
LDB3-203ENST00000372056 UBE2WQ96B02 151 aa8.72□□□□□ -1.01
LDB3-203ENST00000372056 SCGB1C2P0DMR2 95 aa8.72□□□□□ -1.01
LDB3-203ENST00000372056 RPL13AP40429 203 aaKnown RBP8.72□□□□□ -1.01
LDB3-203ENST00000372056 CXCL5P42830 114 aa8.72□□□□□ -1.01
LDB3-203ENST00000372056 TRIAP1O43715 76 aa8.71□□□□□ -1.01
LDB3-203ENST00000372056 MT-ATP8P03928 68 aa8.71□□□□□ -1.01
LDB3-203ENST00000372056 PFN2P35080 140 aa8.71□□□□□ -1.01
LDB3-203ENST00000372056 XGP55808 180 aa8.71□□□□□ -1.01
LDB3-203ENST00000372056 TTC32Q5I0X7 151 aa8.71□□□□□ -1.01
LDB3-203ENST00000372056 CFAP161Q6P656 301 aa8.71□□□□□ -1.01
LDB3-203ENST00000372056 LINC01600Q96MT4 127 aa8.71□□□□□ -1.01
LDB3-203ENST00000372056 COL7A1Q02388 2944 aa8.7□□□□□ -1.02
LDB3-203ENST00000372056 HUWE1Q7Z6Z7 4374 aaKnown RBP8.7□□□□□ -1.02
LDB3-203ENST00000372056 C1orf43Q9BWL3 253 aa8.7□□□□□ -1.02
LDB3-203ENST00000372056 C3orf84H3BNL1 204 aa8.69□□□□□ -1.02
LDB3-203ENST00000372056 SVIPQ8NHG7 77 aa8.69□□□□□ -1.02
LDB3-203ENST00000372056 F8WDY8 70 aa8.68□□□□□ -1.02
LDB3-203ENST00000372056 SPAG11BQ08648 103 aa8.68□□□□□ -1.02
LDB3-203ENST00000372056 SND1-IT1Q9HBX3 110 aa8.68□□□□□ -1.02
LDB3-203ENST00000372056 KRTAP26-1Q6PEX3 210 aa8.68□□□□□ -1.02
LDB3-203ENST00000372056 ANKRD29Q8N6D5 301 aa8.68□□□□□ -1.02
LDB3-203ENST00000372056 COX17Q14061 63 aa8.67□□□□□ -1.02
LDB3-203ENST00000372056 MEGF8Q7Z7M0 2845 aa8.67□□□□□ -1.02
LDB3-203ENST00000372056 DNAH9Q9NYC9 4486 aa8.66□□□□□ -1.02
LDB3-203ENST00000372056 IGKV2-28A0A075B6P5 120 aa8.66□□□□□ -1.02
LDB3-203ENST00000372056 IGKV2D-28P01615 120 aa8.66□□□□□ -1.02
LDB3-203ENST00000372056 COX6CP09669 75 aa8.66□□□□□ -1.02
LDB3-203ENST00000372056 C6orf223Q8N319 242 aa8.66□□□□□ -1.02
LDB3-203ENST00000372056 TRAV13-2A0A0B4J235 113 aa8.65□□□□□ -1.02
LDB3-203ENST00000372056 SLC25A20O43772 301 aa8.65□□□□□ -1.02
LDB3-203ENST00000372056 ATXN8Q156A1 80 aa8.65□□□□□ -1.02
LDB3-203ENST00000372056 LINC00337Q8N6G1 96 aa8.65□□□□□ -1.02
LDB3-203ENST00000372056 C9orf116Q5BN46 136 aaPredicted RBP8.64□□□□□ -1.03
LDB3-203ENST00000372056 C10orf25Q5T742 122 aa8.64□□□□□ -1.03
LDB3-203ENST00000372056 UNQ6190/PRO20217Q6UXQ8 127 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms