RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 C10orf142B7Z368 130 aa9.16□□□□□ -0.94
GPC4-201ENST00000370828 SETD2Q9BYW2 2564 aaPredicted RBP9.15□□□□□ -0.94
GPC4-201ENST00000370828 ZNF843Q8N446 348 aa9.15□□□□□ -0.94
GPC4-201ENST00000370828 RETNLBQ9BQ08 111 aa9.15□□□□□ -0.94
GPC4-201ENST00000370828 HIGD2AQ9BW72 106 aa9.15□□□□□ -0.94
GPC4-201ENST00000370828 LINC00337Q8N6G1 96 aa9.15□□□□□ -0.95
GPC4-201ENST00000370828 LRP4O75096 1905 aa9.14□□□□□ -0.95
GPC4-201ENST00000370828 NAV2Q8IVL1 2488 aa9.14□□□□□ -0.95
GPC4-201ENST00000370828 IGKV2-28A0A075B6P5 120 aa9.13□□□□□ -0.95
GPC4-201ENST00000370828 IGKV2D-28P01615 120 aa9.13□□□□□ -0.95
GPC4-201ENST00000370828 C9orf116Q5BN46 136 aaPredicted RBP9.13□□□□□ -0.95
GPC4-201ENST00000370828 FN1P02751 2386 aaKnown RBP9.13□□□□□ -0.95
GPC4-201ENST00000370828 FHL2Q14192 279 aa9.13□□□□□ -0.95
GPC4-201ENST00000370828 LINC00208Q96KT6 92 aa9.13□□□□□ -0.95
GPC4-201ENST00000370828 KIF25-AS1Q9Y6Z4 181 aa9.13□□□□□ -0.95
GPC4-201ENST00000370828 PRR15Q8IV56 129 aa9.13□□□□□ -0.95
GPC4-201ENST00000370828 ZNF462Q96JM2 2506 aa9.12□□□□□ -0.95
GPC4-201ENST00000370828 Q6ZSN1 163 aa9.12□□□□□ -0.95
GPC4-201ENST00000370828 ADAMTS20P59510 1910 aa9.12□□□□□ -0.95
GPC4-201ENST00000370828 ATP11AUNQ6ZP68 121 aa9.12□□□□□ -0.95
GPC4-201ENST00000370828 B9D2Q9BPU9 175 aa9.11□□□□□ -0.95
GPC4-201ENST00000370828 HIVEP2P31629 2446 aa9.11□□□□□ -0.95
GPC4-201ENST00000370828 BBC3Q96PG8 261 aaPredicted RBP9.11□□□□□ -0.95
GPC4-201ENST00000370828 CYP4F30PQ9H0H9 118 aa9.11□□□□□ -0.95
GPC4-201ENST00000370828 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.11□□□□□ -0.95
GPC4-201ENST00000370828 Q8IZM0 81 aa9.11□□□□□ -0.95
GPC4-201ENST00000370828 hDV103S1A0JD37 113 aa9.1□□□□□ -0.95
GPC4-201ENST00000370828 DOPEY1Q5JWR5 2465 aa9.1□□□□□ -0.95
GPC4-201ENST00000370828 LINC01547P58512 204 aaPredicted RBP9.1□□□□□ -0.95
GPC4-201ENST00000370828 FAM218AQ96MZ4 157 aa9.1□□□□□ -0.95
GPC4-201ENST00000370828 IGLV4-60A0A075B6I1 120 aa9.1□□□□□ -0.95
GPC4-201ENST00000370828 C18orf65Q6ZTR6 163 aa9.1□□□□□ -0.95
GPC4-201ENST00000370828 PTPRBP23467 1997 aa9.09□□□□□ -0.95
GPC4-201ENST00000370828 CEP192Q8TEP8 1941 aa9.09□□□□□ -0.95
GPC4-201ENST00000370828 IGKV2-24A0A0C4DH68 120 aa9.09□□□□□ -0.95
GPC4-201ENST00000370828 A8MTW9 85 aa9.09□□□□□ -0.96
GPC4-201ENST00000370828 Q9UF83 564 aa9.09□□□□□ -0.96
GPC4-201ENST00000370828 TLN2Q9Y4G6 2542 aa9.08□□□□□ -0.96
GPC4-201ENST00000370828 LINC00474Q9P2X8 69 aa9.08□□□□□ -0.96
GPC4-201ENST00000370828 IGLV1-40P01703 118 aa9.08□□□□□ -0.96
GPC4-201ENST00000370828 LINC00315P59091 139 aa9.08□□□□□ -0.96
GPC4-201ENST00000370828 C11orf71Q6IPW1 123 aa9.08□□□□□ -0.96
GPC4-201ENST00000370828 UNQ6190/PRO20217Q6UXQ8 127 aa9.08□□□□□ -0.96
GPC4-201ENST00000370828 C9orf66Q5T8R8 295 aa9.07□□□□□ -0.96
GPC4-201ENST00000370828 DNAH12Q6ZR08 3092 aa9.07□□□□□ -0.96
GPC4-201ENST00000370828 COX17Q14061 63 aa9.07□□□□□ -0.96
GPC4-201ENST00000370828 RBM12B-AS1Q9P1G2 102 aa9.06□□□□□ -0.96
GPC4-201ENST00000370828 IGF2RP11717 2491 aa9.06□□□□□ -0.96
GPC4-201ENST00000370828 CYSRT1A8MQ03 144 aa9.06□□□□□ -0.96
GPC4-201ENST00000370828 M0R378 163 aa9.06□□□□□ -0.96
GPC4-201ENST00000370828 USP9XQ93008 2570 aaPredicted RBP9.06□□□□□ -0.96
GPC4-201ENST00000370828 SMCR5Q8TEV8 140 aa9.06□□□□□ -0.96
GPC4-201ENST00000370828 C19orf84I3L1E1 186 aa9.05□□□□□ -0.96
GPC4-201ENST00000370828 LINC00575Q6W349 94 aa9.03□□□□□ -0.96
GPC4-201ENST00000370828 DEFB113Q30KQ7 82 aa9.03□□□□□ -0.96
GPC4-201ENST00000370828 RPL37AP8A6NKH3 93 aa9.02□□□□□ -0.96
GPC4-201ENST00000370828 SYCNQ0VAF6 134 aa9.02□□□□□ -0.96
GPC4-201ENST00000370828 IGLV5-39A0A0G2JS06 123 aa9.02□□□□□ -0.97
GPC4-201ENST00000370828 Q6YL49 198 aa9.02□□□□□ -0.97
GPC4-201ENST00000370828 A8MUN3 132 aa9.02□□□□□ -0.97
GPC4-201ENST00000370828 MUC7Q8TAX7 377 aa9.02□□□□□ -0.97
GPC4-201ENST00000370828 PKD1L2Q7Z442 2459 aa9.01□□□□□ -0.97
GPC4-201ENST00000370828 LINC00482Q8N8I6 264 aa9.01□□□□□ -0.97
GPC4-201ENST00000370828 DNAJC9-AS1A6NH13 148 aa9.01□□□□□ -0.97
GPC4-201ENST00000370828 USP9YO00507 2555 aaPredicted RBP9□□□□□ -0.97
GPC4-201ENST00000370828 ODF3L2Q3SX64 289 aa8.99□□□□□ -0.97
GPC4-201ENST00000370828 ZNF702PQ9H963 129 aa8.99□□□□□ -0.97
GPC4-201ENST00000370828 PRRC2CQ9Y520 2896 aaKnown RBP8.99□□□□□ -0.97
GPC4-201ENST00000370828 KLKP1Q107X0 134 aa8.99□□□□□ -0.97
GPC4-201ENST00000370828 DHRS4-AS1Q9P1J3 65 aa8.99□□□□□ -0.97
GPC4-201ENST00000370828 C1orf137Q5JT78 98 aa8.98□□□□□ -0.97
GPC4-201ENST00000370828 CDSNQ15517 529 aa8.97□□□□□ -0.97
GPC4-201ENST00000370828 TRAV10A0A0B4J240 114 aa8.97□□□□□ -0.97
GPC4-201ENST00000370828 CHD8Q9HCK8 2581 aa8.97□□□□□ -0.97
GPC4-201ENST00000370828 A0A0C4DFX4 3053 aa8.97□□□□□ -0.97
GPC4-201ENST00000370828 ERC2-IT1O76042 136 aa8.97□□□□□ -0.97
GPC4-201ENST00000370828 LINC01006Q8NI28 216 aa8.97□□□□□ -0.97
GPC4-201ENST00000370828 LITAFQ99732 161 aa8.97□□□□□ -0.97
GPC4-201ENST00000370828 C6orf223Q8N319 242 aa8.96□□□□□ -0.97
GPC4-201ENST00000370828 RAI1Q7Z5J4 1906 aaPredicted RBP8.96□□□□□ -0.98
GPC4-201ENST00000370828 AVPP01185 164 aa8.95□□□□□ -0.98
GPC4-201ENST00000370828 IGHV4-30-4P0DP06 118 aa8.95□□□□□ -0.98
GPC4-201ENST00000370828 IGHV4-31P0DP07 118 aa8.95□□□□□ -0.98
GPC4-201ENST00000370828 NCOR2Q9Y618 2525 aa8.94□□□□□ -0.98
GPC4-201ENST00000370828 TM2D3Q9BRN9 247 aa8.94□□□□□ -0.98
GPC4-201ENST00000370828 DEFB116Q30KQ4 102 aa8.94□□□□□ -0.98
GPC4-201ENST00000370828 SPATA3Q8NHX4 192 aa8.94□□□□□ -0.98
GPC4-201ENST00000370828 ABCA12Q86UK0 2595 aa8.93□□□□□ -0.98
GPC4-201ENST00000370828 H7BZZ5 65 aa8.93□□□□□ -0.98
GPC4-201ENST00000370828 LELP1Q5T871 98 aa8.93□□□□□ -0.98
GPC4-201ENST00000370828 H0Y9P7 68 aa8.93□□□□□ -0.98
GPC4-201ENST00000370828 EIF4EBP3O60516 100 aaPredicted RBP8.93□□□□□ -0.98
GPC4-201ENST00000370828 SPINT4Q6UDR6 99 aa8.92□□□□□ -0.98
GPC4-201ENST00000370828 Q5XG85 94 aa8.92□□□□□ -0.98
GPC4-201ENST00000370828 PCOTHQ58A44 107 aa8.92□□□□□ -0.98
GPC4-201ENST00000370828 IGLV5-45A0A087WSX0 123 aa8.92□□□□□ -0.98
GPC4-201ENST00000370828 SMIM29Q86T20 159 aa8.92□□□□□ -0.98
GPC4-201ENST00000370828 TRAV22A0A0B4J277 110 aa8.91□□□□□ -0.98
GPC4-201ENST00000370828 IGHV3OR16-9A0A0B4J2B5 98 aa8.91□□□□□ -0.98
GPC4-201ENST00000370828 PLA2G2AP14555 144 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms