RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 VSIG2Q96IQ7 327 aa11.13□□□□□ -0.63
SEMA6C-202ENST00000368912 IGHV3-73A0A0B4J1V6 119 aa11.13□□□□□ -0.63
SEMA6C-202ENST00000368912 GNRH2O43555 120 aa11.13□□□□□ -0.63
SEMA6C-202ENST00000368912 GPHB5Q86YW7 130 aa11.12□□□□□ -0.63
SEMA6C-202ENST00000368912 NCR3O14931 201 aa11.12□□□□□ -0.63
SEMA6C-202ENST00000368912 DAD1P61803 113 aa11.12□□□□□ -0.63
SEMA6C-202ENST00000368912 CFHR3Q02985 330 aa11.12□□□□□ -0.63
SEMA6C-202ENST00000368912 A0A0J9YX75 114 aa11.11□□□□□ -0.63
SEMA6C-202ENST00000368912 TRBV27A0A0K0K1C4 114 aa11.11□□□□□ -0.63
SEMA6C-202ENST00000368912 RNASE1P07998 156 aaKnown RBP11.11□□□□□ -0.63
SEMA6C-202ENST00000368912 MRPS36P82909 103 aaKnown RBP11.11□□□□□ -0.63
SEMA6C-202ENST00000368912 C19orf54Q5BKX5 351 aa11.11□□□□□ -0.63
SEMA6C-202ENST00000368912 LYPD5Q6UWN5 251 aa11.11□□□□□ -0.63
SEMA6C-202ENST00000368912 LITAFQ99732 161 aa11.11□□□□□ -0.63
SEMA6C-202ENST00000368912 Q8N2B8 174 aa11.11□□□□□ -0.63
SEMA6C-202ENST00000368912 PAX4O43316 350 aa11.11□□□□□ -0.63
SEMA6C-202ENST00000368912 FAM218AQ96MZ4 157 aa11.1□□□□□ -0.63
SEMA6C-202ENST00000368912 STHQ8IWL8 128 aa11.09□□□□□ -0.63
SEMA6C-202ENST00000368912 PRR9Q5T870 116 aa11.08□□□□□ -0.63
SEMA6C-202ENST00000368912 C4orf3Q8WVX3 66 aa11.08□□□□□ -0.63
SEMA6C-202ENST00000368912 ZNF561-AS1K7EIQ3 104 aa11.08□□□□□ -0.64
SEMA6C-202ENST00000368912 A0A087WZ39 114 aa11.08□□□□□ -0.64
SEMA6C-202ENST00000368912 IGHV1-58A0A0C4DH39 117 aa11.08□□□□□ -0.64
SEMA6C-202ENST00000368912 SUMO4Q6EEV6 95 aa11.08□□□□□ -0.64
SEMA6C-202ENST00000368912 IGHV4-4A0A075B6R2 117 aa11.07□□□□□ -0.64
SEMA6C-202ENST00000368912 CD164Q04900 197 aa11.07□□□□□ -0.64
SEMA6C-202ENST00000368912 FAM222AQ5U5X8 452 aa11.07□□□□□ -0.64
SEMA6C-202ENST00000368912 C9orf129Q5T035 196 aaKnown RBP11.06□□□□□ -0.64
SEMA6C-202ENST00000368912 C4orf48Q5BLP8 95 aa11.06□□□□□ -0.64
SEMA6C-202ENST00000368912 IGHV3-53P01767 116 aa11.05□□□□□ -0.64
SEMA6C-202ENST00000368912 PRB2P02812 416 aaPredicted RBP11.05□□□□□ -0.64
SEMA6C-202ENST00000368912 LINC00308Q8TCZ7 52 aa11.05□□□□□ -0.64
SEMA6C-202ENST00000368912 FBN1P35555 2871 aaKnown RBP11.05□□□□□ -0.64
SEMA6C-202ENST00000368912 C11orf68Q9H3H3 251 aaKnown RBP11.05□□□□□ -0.64
SEMA6C-202ENST00000368912 POLR2KP53803 58 aaKnown RBP11.04□□□□□ -0.64
SEMA6C-202ENST00000368912 TRAV7A0A075B6U4 112 aa11.04□□□□□ -0.64
SEMA6C-202ENST00000368912 SLPIP03973 132 aa11.04□□□□□ -0.64
SEMA6C-202ENST00000368912 UBL5Q9BZL1 73 aa11.04□□□□□ -0.64
SEMA6C-202ENST00000368912 HAMPP81172 84 aa11.03□□□□□ -0.64
SEMA6C-202ENST00000368912 DEFB114Q30KQ6 69 aa11.03□□□□□ -0.64
SEMA6C-202ENST00000368912 PIK3CD-AS1Q5SR53 167 aa11.03□□□□□ -0.64
SEMA6C-202ENST00000368912 SPATA3Q8NHX4 192 aa11.03□□□□□ -0.64
SEMA6C-202ENST00000368912 Q9H8V8 135 aa11.03□□□□□ -0.64
SEMA6C-202ENST00000368912 IGLV4-3A0A075B6K6 122 aa11.03□□□□□ -0.64
SEMA6C-202ENST00000368912 LRCOL1A6NCL2 159 aa11.03□□□□□ -0.64
SEMA6C-202ENST00000368912 IGHV1OR15-1A0A075B7D0 117 aa11.02□□□□□ -0.64
SEMA6C-202ENST00000368912 K7EMT4 169 aa11.02□□□□□ -0.64
SEMA6C-202ENST00000368912 CRPP02741 224 aa11.02□□□□□ -0.64
SEMA6C-202ENST00000368912 C9orf47Q6ZRZ4 202 aa11.02□□□□□ -0.64
SEMA6C-202ENST00000368912 EPM2AB3EWF7 344 aa11.02□□□□□ -0.65
SEMA6C-202ENST00000368912 LECT2O14960 151 aa11.02□□□□□ -0.65
SEMA6C-202ENST00000368912 DEFB4AO15263 64 aa11.02□□□□□ -0.65
SEMA6C-202ENST00000368912 IGHV3-16A0A0C4DH30 117 aa11.02□□□□□ -0.65
SEMA6C-202ENST00000368912 PROK1P58294 105 aa11.01□□□□□ -0.65
SEMA6C-202ENST00000368912 KRTAP10-3P60369 221 aa11.01□□□□□ -0.65
SEMA6C-202ENST00000368912 K7EQG2 157 aa11□□□□□ -0.65
SEMA6C-202ENST00000368912 OXLD1Q5BKU9 147 aa11□□□□□ -0.65
SEMA6C-202ENST00000368912 C22orf24Q9Y442 160 aa11□□□□□ -0.65
SEMA6C-202ENST00000368912 C20orf203Q8NBC4 194 aa10.99□□□□□ -0.65
SEMA6C-202ENST00000368912 MAP6D1Q9H9H5 199 aa10.99□□□□□ -0.65
SEMA6C-202ENST00000368912 FAM229BQ4G0N7 80 aa10.98□□□□□ -0.65
SEMA6C-202ENST00000368912 A0A087WYN8 130 aa10.98□□□□□ -0.65
SEMA6C-202ENST00000368912 BEAN1Q3B7T3 259 aa10.98□□□□□ -0.65
SEMA6C-202ENST00000368912 RPL36AP83881 106 aaKnown RBP10.97□□□□□ -0.65
SEMA6C-202ENST00000368912 DGAT2L7PQ6IED9 249 aa10.97□□□□□ -0.65
SEMA6C-202ENST00000368912 RPL36ALQ969Q0 106 aaKnown RBP10.97□□□□□ -0.65
SEMA6C-202ENST00000368912 MIR7-3HGQ8N6C7 128 aa10.97□□□□□ -0.65
SEMA6C-202ENST00000368912 ZFAND2AQ8N6M9 145 aa10.97□□□□□ -0.65
SEMA6C-202ENST00000368912 PLAC8L1A1L4L8 177 aa10.97□□□□□ -0.65
SEMA6C-202ENST00000368912 HTN3P15516 51 aa10.97□□□□□ -0.65
SEMA6C-202ENST00000368912 OVOL2Q9BRP0 275 aa10.96□□□□□ -0.65
SEMA6C-202ENST00000368912 ATP5EP2Q5VTU8 51 aa10.95□□□□□ -0.66
SEMA6C-202ENST00000368912 MIFP14174 115 aa10.95□□□□□ -0.66
SEMA6C-202ENST00000368912 TRGV1A0A0A0MS02 117 aa10.94□□□□□ -0.66
SEMA6C-202ENST00000368912 DEFB130BP0DP73 79 aa10.94□□□□□ -0.66
SEMA6C-202ENST00000368912 DEFB130AP0DP74 79 aa10.94□□□□□ -0.66
SEMA6C-202ENST00000368912 KLKP1Q107X0 134 aa10.94□□□□□ -0.66
SEMA6C-202ENST00000368912 KRTAP24-1Q3LI83 254 aa10.94□□□□□ -0.66
SEMA6C-202ENST00000368912 TRAV10A0A0B4J240 114 aa10.94□□□□□ -0.66
SEMA6C-202ENST00000368912 PSPHP1O15172 72 aa10.94□□□□□ -0.66
SEMA6C-202ENST00000368912 ODF3L2Q3SX64 289 aa10.94□□□□□ -0.66
SEMA6C-202ENST00000368912 CDKN2A-AS1Q9UH64 79 aa10.94□□□□□ -0.66
SEMA6C-202ENST00000368912 TRAV13-2A0A0B4J235 113 aa10.93□□□□□ -0.66
SEMA6C-202ENST00000368912 MRPL53Q96EL3 112 aaKnown RBP10.93□□□□□ -0.66
SEMA6C-202ENST00000368912 LAMTOR3Q9UHA4 124 aa10.93□□□□□ -0.66
SEMA6C-202ENST00000368912 NDUFC1O43677 76 aa10.93□□□□□ -0.66
SEMA6C-202ENST00000368912 ATP5EP56381 51 aaPredicted RBP10.93□□□□□ -0.66
SEMA6C-202ENST00000368912 ESRGQ1W209 222 aa10.93□□□□□ -0.66
SEMA6C-202ENST00000368912 RNASE3P12724 160 aaKnown RBP10.92□□□□□ -0.66
SEMA6C-202ENST00000368912 AKAP9Q99996 3911 aa10.92□□□□□ -0.66
SEMA6C-202ENST00000368912 ORMDL1Q9P0S3 153 aa10.91□□□□□ -0.66
SEMA6C-202ENST00000368912 MUC4Q99102 2169 aa10.91□□□□□ -0.66
SEMA6C-202ENST00000368912 TRGV2A0A075B6R0 118 aa10.91□□□□□ -0.66
SEMA6C-202ENST00000368912 PRR15Q8IV56 129 aa10.91□□□□□ -0.66
SEMA6C-202ENST00000368912 TRRAPQ9Y4A5 3859 aa10.9□□□□□ -0.66
SEMA6C-202ENST00000368912 DEFB135Q30KP9 77 aa10.89□□□□□ -0.67
SEMA6C-202ENST00000368912 FUSP35637 526 aaKnown RBP eCLIP10.89□□□□□ -0.67
SEMA6C-202ENST00000368912 IGHV3-38A0A0C4DH36 116 aa10.89□□□□□ -0.67
SEMA6C-202ENST00000368912 NDUFA1O15239 70 aa10.89□□□□□ -0.67
SEMA6C-202ENST00000368912 LINC00315P59091 139 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms