RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 DIP2CQ9Y2E4 1556 aa-0.63□□□□□ -2.51
ECHDC1-201ENST00000368287 CHD1O14646 1710 aa-0.64□□□□□ -2.51
ECHDC1-201ENST00000368287 PDCD11Q14690 1871 aaKnown RBP-0.64□□□□□ -2.51
ECHDC1-201ENST00000368287 COL4A6Q14031 1691 aa-0.64□□□□□ -2.51
ECHDC1-201ENST00000368287 NLRP1Q9C000 1473 aa-0.64□□□□□ -2.51
ECHDC1-201ENST00000368287 A0A1B0GWA3 101 aa-0.64□□□□□ -2.51
ECHDC1-201ENST00000368287 SNCAP37840 140 aa-0.64□□□□□ -2.51
ECHDC1-201ENST00000368287 GNG8Q9UK08 70 aa-0.64□□□□□ -2.51
ECHDC1-201ENST00000368287 XRN1Q8IZH2 1706 aaKnown RBP-0.64□□□□□ -2.51
ECHDC1-201ENST00000368287 ARHGAP5Q13017 1502 aa-0.64□□□□□ -2.51
ECHDC1-201ENST00000368287 CREBBPQ92793 2442 aa-0.65□□□□□ -2.51
ECHDC1-201ENST00000368287 STAB2Q8WWQ8 2551 aa-0.65□□□□□ -2.51
ECHDC1-201ENST00000368287 CNOT1A5YKK6 2376 aaKnown RBP-0.65□□□□□ -2.51
ECHDC1-201ENST00000368287 NAP1L6A6NFF2 107 aa-0.65□□□□□ -2.51
ECHDC1-201ENST00000368287 COX6CP09669 75 aa-0.65□□□□□ -2.51
ECHDC1-201ENST00000368287 MARF1Q9Y4F3 1742 aaKnown RBP-0.65□□□□□ -2.51
ECHDC1-201ENST00000368287 NBEAL1Q6ZS30 2694 aa-0.66□□□□□ -2.51
ECHDC1-201ENST00000368287 CRYM-AS1A6NIL9 109 aa-0.66□□□□□ -2.52
ECHDC1-201ENST00000368287 C12orf57Q99622 126 aa-0.66□□□□□ -2.52
ECHDC1-201ENST00000368287 PRO1933Q9H354 126 aa-0.66□□□□□ -2.52
ECHDC1-201ENST00000368287 EIF4G3O43432 1585 aaKnown RBP-0.66□□□□□ -2.52
ECHDC1-201ENST00000368287 PAPPA2Q9BXP8 1791 aa-0.67□□□□□ -2.52
ECHDC1-201ENST00000368287 SPINK4O60575 86 aa-0.67□□□□□ -2.52
ECHDC1-201ENST00000368287 CRIPTQ9P021 101 aa-0.67□□□□□ -2.52
ECHDC1-201ENST00000368287 ABCA3Q99758 1704 aa-0.67□□□□□ -2.52
ECHDC1-201ENST00000368287 PLEKHH2Q8IVE3 1493 aa-0.67□□□□□ -2.52
ECHDC1-201ENST00000368287 MRC2Q9UBG0 1479 aa-0.67□□□□□ -2.52
ECHDC1-201ENST00000368287 NF1P21359 2839 aa-0.68□□□□□ -2.52
ECHDC1-201ENST00000368287 A0A087WVE0 104 aa-0.68□□□□□ -2.52
ECHDC1-201ENST00000368287 hADV29S1A0JD25 119 aa-0.68□□□□□ -2.52
ECHDC1-201ENST00000368287 APLNQ9ULZ1 77 aa-0.68□□□□□ -2.52
ECHDC1-201ENST00000368287 SETBP1Q9Y6X0 1596 aa-0.68□□□□□ -2.52
ECHDC1-201ENST00000368287 TOPAZ1Q8N9V7 1692 aa-0.69□□□□□ -2.52
ECHDC1-201ENST00000368287 A0A0G2JMZ2 1700 aa-0.69□□□□□ -2.52
ECHDC1-201ENST00000368287 ANKRD36A6QL64 1941 aa-0.69□□□□□ -2.52
ECHDC1-201ENST00000368287 SYS1-DBNDD2H3BUS1 97 aa-0.69□□□□□ -2.52
ECHDC1-201ENST00000368287 SEC11AP67812 179 aa-0.69□□□□□ -2.52
ECHDC1-201ENST00000368287 KRTAP20-2Q3LI61 65 aa-0.69□□□□□ -2.52
ECHDC1-201ENST00000368287 MAPKBP1O60336 1514 aa-0.69□□□□□ -2.52
ECHDC1-201ENST00000368287 NEBP20929 6669 aa-0.7□□□□□ -2.52
ECHDC1-201ENST00000368287 SVEP1Q4LDE5 3571 aa-0.7□□□□□ -2.52
ECHDC1-201ENST00000368287 SAA2P0DJI9 122 aaPredicted RBP-0.7□□□□□ -2.52
ECHDC1-201ENST00000368287 SARNPP82979 210 aaKnown RBP-0.7□□□□□ -2.52
ECHDC1-201ENST00000368287 HSD52Q0P140 79 aa-0.7□□□□□ -2.52
ECHDC1-201ENST00000368287 PKHD1P08F94 4074 aa-0.7□□□□□ -2.52
ECHDC1-201ENST00000368287 ABCC5O15440 1437 aa-0.71□□□□□ -2.52
ECHDC1-201ENST00000368287 H3BQ15 152 aa-0.71□□□□□ -2.52
ECHDC1-201ENST00000368287 M0R2T5 61 aa-0.71□□□□□ -2.52
ECHDC1-201ENST00000368287 ASIPP42127 132 aa-0.71□□□□□ -2.52
ECHDC1-201ENST00000368287 TMEM203Q969S6 136 aa-0.71□□□□□ -2.52
ECHDC1-201ENST00000368287 LINC00846Q9NV44 126 aa-0.71□□□□□ -2.52
ECHDC1-201ENST00000368287 FLGP20930 4061 aaPredicted RBP-0.72□□□□□ -2.52
ECHDC1-201ENST00000368287 IQSEC2Q5JU85 1478 aa-0.72□□□□□ -2.52
ECHDC1-201ENST00000368287 COX8AP10176 69 aa-0.72□□□□□ -2.52
ECHDC1-201ENST00000368287 USMG5Q96IX5 58 aa-0.72□□□□□ -2.52
ECHDC1-201ENST00000368287 HERC1Q15751 4861 aa-0.72□□□□□ -2.52
ECHDC1-201ENST00000368287 KNDC1Q76NI1 1749 aa-0.72□□□□□ -2.53
ECHDC1-201ENST00000368287 KMT2CQ8NEZ4 4911 aaKnown RBP-0.72□□□□□ -2.53
ECHDC1-201ENST00000368287 CPSF4LA6NMK7 179 aaKnown RBP-0.73□□□□□ -2.53
ECHDC1-201ENST00000368287 GTF2H5Q6ZYL4 71 aa-0.73□□□□□ -2.53
ECHDC1-201ENST00000368287 LAMA5O15230 3695 aa-0.74□□□□□ -2.53
ECHDC1-201ENST00000368287 A0A1B0GU69 56 aa-0.74□□□□□ -2.53
ECHDC1-201ENST00000368287 C7orf77A4D0Y5 90 aa-0.74□□□□□ -2.53
ECHDC1-201ENST00000368287 TMEM262E9PQX1 116 aa-0.74□□□□□ -2.53
ECHDC1-201ENST00000368287 MT4P47944 62 aa-0.74□□□□□ -2.53
ECHDC1-201ENST00000368287 MRPS10P82664 201 aaKnown RBP-0.74□□□□□ -2.53
ECHDC1-201ENST00000368287 A0A0G2JND7 137 aa-0.75□□□□□ -2.53
ECHDC1-201ENST00000368287 KRTDAPP60985 99 aa-0.75□□□□□ -2.53
ECHDC1-201ENST00000368287 CGREF1Q99674 301 aa-0.75□□□□□ -2.53
ECHDC1-201ENST00000368287 PCNX1Q96RV3 2341 aa-0.76□□□□□ -2.53
ECHDC1-201ENST00000368287 C6orf201Q7Z4U5 140 aa-0.76□□□□□ -2.53
ECHDC1-201ENST00000368287 DEFB107AQ8IZN7 70 aa-0.76□□□□□ -2.53
ECHDC1-201ENST00000368287 FAT1Q14517 4588 aa-0.76□□□□□ -2.53
ECHDC1-201ENST00000368287 SLIT1O75093 1534 aa-0.77□□□□□ -2.53
ECHDC1-201ENST00000368287 SPRR2AP35326 72 aa-0.77□□□□□ -2.53
ECHDC1-201ENST00000368287 CACFD1Q9UGQ2 172 aa-0.77□□□□□ -2.53
ECHDC1-201ENST00000368287 PCLOQ9Y6V0 5065 aa-0.77□□□□□ -2.53
ECHDC1-201ENST00000368287 TARBP1Q13395 1621 aaKnown RBP-0.78□□□□□ -2.53
ECHDC1-201ENST00000368287 ZFYVE16Q7Z3T8 1539 aa-0.78□□□□□ -2.53
ECHDC1-201ENST00000368287 NKTRP30414 1462 aaKnown RBP-0.78□□□□□ -2.53
ECHDC1-201ENST00000368287 C20orf202A1L168 122 aa-0.78□□□□□ -2.53
ECHDC1-201ENST00000368287 H1FX-AS1Q4G0G2 97 aa-0.78□□□□□ -2.53
ECHDC1-201ENST00000368287 TGP01266 2768 aa-0.78□□□□□ -2.53
ECHDC1-201ENST00000368287 REV3LO60673 3130 aa-0.78□□□□□ -2.53
ECHDC1-201ENST00000368287 FAM135AQ9P2D6 1515 aa-0.79□□□□□ -2.54
ECHDC1-201ENST00000368287 SETD2Q9BYW2 2564 aaPredicted RBP-0.79□□□□□ -2.54
ECHDC1-201ENST00000368287 MXRA5Q9NR99 2828 aa-0.79□□□□□ -2.54
ECHDC1-201ENST00000368287 GNGT2O14610 69 aa-0.79□□□□□ -2.54
ECHDC1-201ENST00000368287 KRTAP6-2Q3LI66 62 aa-0.79□□□□□ -2.54
ECHDC1-201ENST00000368287 SHPRHQ149N8 1683 aa-0.8□□□□□ -2.54
ECHDC1-201ENST00000368287 TRBV25-1A0A075B6N4 114 aa-0.81□□□□□ -2.54
ECHDC1-201ENST00000368287 H0Y9P7 68 aa-0.81□□□□□ -2.54
ECHDC1-201ENST00000368287 H3BQF6 201 aa-0.81□□□□□ -2.54
ECHDC1-201ENST00000368287 SPRR2EP22531 72 aa-0.81□□□□□ -2.54
ECHDC1-201ENST00000368287 VAMP8Q9BV40 100 aa-0.81□□□□□ -2.54
ECHDC1-201ENST00000368287 MLH3Q9UHC1 1453 aa-0.81□□□□□ -2.54
ECHDC1-201ENST00000368287 MON2Q7Z3U7 1717 aa-0.81□□□□□ -2.54
ECHDC1-201ENST00000368287 H7BZZ5 65 aa-0.82□□□□□ -2.54
ECHDC1-201ENST00000368287 MT-ATP8P03928 68 aa-0.82□□□□□ -2.54
ECHDC1-201ENST00000368287 PSMG4Q5JS54 123 aa-0.82□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms