RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 SMCO4Q9NRQ5 59 aa6.23□□□□□ -1.41
CD48-202ENST00000368046 MRPL35Q9NZE8 188 aaKnown RBP6.23□□□□□ -1.41
CD48-202ENST00000368046 VPS13BQ7Z7G8 4022 aa6.22□□□□□ -1.41
CD48-202ENST00000368046 HERVK_113P63121 156 aa6.22□□□□□ -1.41
CD48-202ENST00000368046 C18orf32Q8TCD1 76 aa6.22□□□□□ -1.41
CD48-202ENST00000368046 YPEL4Q96NS1 127 aa6.22□□□□□ -1.41
CD48-202ENST00000368046 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.21□□□□□ -1.42
CD48-202ENST00000368046 NDUFA1O15239 70 aa6.21□□□□□ -1.42
CD48-202ENST00000368046 PTTG1IPP53801 180 aa6.21□□□□□ -1.42
CD48-202ENST00000368046 RAB5BP61020 215 aa6.21□□□□□ -1.42
CD48-202ENST00000368046 GAGE2BQ13066 116 aa6.21□□□□□ -1.42
CD48-202ENST00000368046 UNQ6190/PRO20217Q6UXQ8 127 aa6.21□□□□□ -1.42
CD48-202ENST00000368046 SLC7A5P1Q8MH63 180 aa6.21□□□□□ -1.42
CD48-202ENST00000368046 C7orf33Q8WU49 177 aa6.21□□□□□ -1.42
CD48-202ENST00000368046 A0A0J9YXV3 536 aa6.2□□□□□ -1.42
CD48-202ENST00000368046 C6orf226Q5I0X4 101 aa6.2□□□□□ -1.42
CD48-202ENST00000368046 C10orf25Q5T742 122 aa6.2□□□□□ -1.42
CD48-202ENST00000368046 URB1-AS1Q96HZ7 61 aa6.2□□□□□ -1.42
CD48-202ENST00000368046 CST9LQ9H4G1 147 aa6.2□□□□□ -1.42
CD48-202ENST00000368046 GEMIN7Q9H840 131 aaKnown RBP6.2□□□□□ -1.42
CD48-202ENST00000368046 TINCRA0A1B0GVN0 87 aa6.19□□□□□ -1.42
CD48-202ENST00000368046 TLX1NBP0CAT3 122 aa6.19□□□□□ -1.42
CD48-202ENST00000368046 PMVKQ15126 192 aa6.19□□□□□ -1.42
CD48-202ENST00000368046 CDKN2A-AS1Q9UH64 79 aa6.19□□□□□ -1.42
CD48-202ENST00000368046 A0A096LNJ9 63 aa6.18□□□□□ -1.42
CD48-202ENST00000368046 TRBV30A0A0K0K1B3 111 aa6.18□□□□□ -1.42
CD48-202ENST00000368046 A0A1W2PNN7 141 aa6.18□□□□□ -1.42
CD48-202ENST00000368046 PRSS2P07478 247 aa6.18□□□□□ -1.42
CD48-202ENST00000368046 RPL18AQ02543 176 aaKnown RBP6.18□□□□□ -1.42
CD48-202ENST00000368046 PACRGQ96M98 296 aaPredicted RBP6.18□□□□□ -1.42
CD48-202ENST00000368046 C6orf48Q9UBA6 75 aa6.18□□□□□ -1.42
CD48-202ENST00000368046 KRTAP29-1A8MX34 341 aaPredicted RBP6.17□□□□□ -1.42
CD48-202ENST00000368046 HBDP02042 147 aa6.17□□□□□ -1.42
CD48-202ENST00000368046 CKS1BP61024 79 aa6.17□□□□□ -1.42
CD48-202ENST00000368046 C2orf82Q6UX34 121 aa6.17□□□□□ -1.42
CD48-202ENST00000368046 Q6ZRP5 223 aa6.17□□□□□ -1.42
CD48-202ENST00000368046 CBLN2Q8IUK8 224 aa6.17□□□□□ -1.42
CD48-202ENST00000368046 Q8IZM0 81 aa6.17□□□□□ -1.42
CD48-202ENST00000368046 TOMM7Q9P0U1 55 aa6.17□□□□□ -1.42
CD48-202ENST00000368046 MYCBP2O75592 4640 aa6.16□□□□□ -1.42
CD48-202ENST00000368046 IGLV5-45A0A087WSX0 123 aa6.16□□□□□ -1.42
CD48-202ENST00000368046 C9orf116Q5BN46 136 aaPredicted RBP6.16□□□□□ -1.42
CD48-202ENST00000368046 PDZD11Q5EBL8 140 aa6.16□□□□□ -1.42
CD48-202ENST00000368046 LINC00469Q8N7U9 141 aa6.16□□□□□ -1.42
CD48-202ENST00000368046 ATP5LO75964 103 aa6.15□□□□□ -1.42
CD48-202ENST00000368046 OXTP01178 125 aa6.15□□□□□ -1.42
CD48-202ENST00000368046 HNRNPA3P51991 378 aaKnown RBP6.15□□□□□ -1.42
CD48-202ENST00000368046 NDUFA6P56556 154 aa6.15□□□□□ -1.42
CD48-202ENST00000368046 PMCHL1Q16048 86 aa6.15□□□□□ -1.42
CD48-202ENST00000368046 CHCHD1Q96BP2 118 aaKnown RBP6.15□□□□□ -1.42
CD48-202ENST00000368046 SMIM1B2RUZ4 78 aa6.14□□□□□ -1.43
CD48-202ENST00000368046 NDUFC2-KCTD14E9PQ53 114 aa6.14□□□□□ -1.43
CD48-202ENST00000368046 TRGC2P03986 189 aa6.14□□□□□ -1.43
CD48-202ENST00000368046 GAGE2EQ4V326 116 aa6.14□□□□□ -1.43
CD48-202ENST00000368046 GAGE2DQ9UEU5 116 aa6.14□□□□□ -1.43
CD48-202ENST00000368046 FLG2Q5D862 2391 aaPredicted RBP6.13□□□□□ -1.43
CD48-202ENST00000368046 F8VRH5 84 aa6.13□□□□□ -1.43
CD48-202ENST00000368046 H3BRM9 83 aa6.13□□□□□ -1.43
CD48-202ENST00000368046 IGLC3P0DOY3 106 aa6.13□□□□□ -1.43
CD48-202ENST00000368046 CXCL5P42830 114 aa6.13□□□□□ -1.43
CD48-202ENST00000368046 BAGE3Q86Y29 109 aa6.13□□□□□ -1.43
CD48-202ENST00000368046 COX7B2Q8TF08 81 aa6.13□□□□□ -1.43
CD48-202ENST00000368046 COLCA2A8K830 154 aa6.12□□□□□ -1.43
CD48-202ENST00000368046 PRR3P79522 188 aaKnown RBP6.12□□□□□ -1.43
CD48-202ENST00000368046 HERC1Q15751 4861 aa6.11□□□□□ -1.43
CD48-202ENST00000368046 HSBP1O75506 76 aa6.11□□□□□ -1.43
CD48-202ENST00000368046 SPINK8P0C7L1 97 aa6.11□□□□□ -1.43
CD48-202ENST00000368046 PHF5AQ7RTV0 110 aaKnown RBP6.11□□□□□ -1.43
CD48-202ENST00000368046 LRP1Q07954 4544 aaKnown RBP6.1□□□□□ -1.43
CD48-202ENST00000368046 IGLV5-39A0A0G2JS06 123 aa6.1□□□□□ -1.43
CD48-202ENST00000368046 FAM168BA1KXE4 195 aa6.1□□□□□ -1.43
CD48-202ENST00000368046 ZNF22P17026 224 aaPredicted RBP6.1□□□□□ -1.43
CD48-202ENST00000368046 SRSF9Q13242 221 aaKnown RBP eCLIP6.1□□□□□ -1.43
CD48-202ENST00000368046 C9orf129Q5T035 196 aaKnown RBP6.1□□□□□ -1.43
CD48-202ENST00000368046 IFI27L1Q96BM0 104 aa6.1□□□□□ -1.43
CD48-202ENST00000368046 DMBT1Q9UGM3 2413 aaPredicted RBP6.09□□□□□ -1.43
CD48-202ENST00000368046 TRAV12-1A0A0B4J245 112 aa6.09□□□□□ -1.43
CD48-202ENST00000368046 SPINK6Q6UWN8 80 aa6.09□□□□□ -1.43
CD48-202ENST00000368046 KRTAP7-1Q8IUC3 87 aa6.09□□□□□ -1.43
CD48-202ENST00000368046 FAM19A2Q8N3H0 131 aa6.09□□□□□ -1.43
CD48-202ENST00000368046 PSORS1C2Q9UIG4 136 aa6.09□□□□□ -1.43
CD48-202ENST00000368046 CHTOPQ9Y3Y2 248 aaKnown RBP6.09□□□□□ -1.43
CD48-202ENST00000368046 C11orf86A6NJI1 115 aa6.08□□□□□ -1.44
CD48-202ENST00000368046 TMEM170BQ5T4T1 132 aa6.08□□□□□ -1.44
CD48-202ENST00000368046 FAM19A5Q7Z5A7 132 aaPredicted RBP6.08□□□□□ -1.44
CD48-202ENST00000368046 ODF1Q14990 250 aa6.07□□□□□ -1.44
CD48-202ENST00000368046 XAGE1AQ9HD64 81 aa6.07□□□□□ -1.44
CD48-202ENST00000368046 FAT3Q8TDW7 4589 aa6.06□□□□□ -1.44
CD48-202ENST00000368046 M0QXV9 152 aa6.06□□□□□ -1.44
CD48-202ENST00000368046 SERF1AO75920 110 aa6.06□□□□□ -1.44
CD48-202ENST00000368046 LEPROTL1O95214 131 aa6.06□□□□□ -1.44
CD48-202ENST00000368046 C1orf137Q5JT78 98 aa6.06□□□□□ -1.44
CD48-202ENST00000368046 C22orf24Q9Y442 160 aa6.06□□□□□ -1.44
CD48-202ENST00000368046 TMEM223A0PJW6 202 aa6.05□□□□□ -1.44
CD48-202ENST00000368046 NUPR1O60356 82 aa6.05□□□□□ -1.44
CD48-202ENST00000368046 LINC00310P59036 64 aa6.05□□□□□ -1.44
CD48-202ENST00000368046 UBE2BP63146 152 aa6.05□□□□□ -1.44
CD48-202ENST00000368046 LBHQ53QV2 105 aaPredicted RBP6.05□□□□□ -1.44
CD48-202ENST00000368046 SERTAD4-AS1Q5TG53 156 aa6.05□□□□□ -1.44
CD48-202ENST00000368046 SFTA2Q6UW10 78 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms