RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 Q6ZQY7 126 aa6.34□□□□□ -1.39
SYNE1-206ENST00000367253 NUP210LQ5VU65 1888 aa6.34□□□□□ -1.39
SYNE1-206ENST00000367253 CDSNQ15517 529 aa6.34□□□□□ -1.39
SYNE1-206ENST00000367253 C22orf34Q6ZV56 151 aa6.34□□□□□ -1.39
SYNE1-206ENST00000367253 NEXN-AS1Q8NBZ9 246 aa6.34□□□□□ -1.39
SYNE1-206ENST00000367253 IBA57-AS1B1ANH7 110 aa6.34□□□□□ -1.4
SYNE1-206ENST00000367253 FHL3Q13643 280 aa6.33□□□□□ -1.4
SYNE1-206ENST00000367253 Q8N3U1 123 aa6.33□□□□□ -1.4
SYNE1-206ENST00000367253 DHRS4-AS1Q9P1J3 65 aa6.33□□□□□ -1.4
SYNE1-206ENST00000367253 MAPKAPK5-AS1Q8N8E1 139 aa6.33□□□□□ -1.4
SYNE1-206ENST00000367253 C1orf137Q5JT78 98 aa6.33□□□□□ -1.4
SYNE1-206ENST00000367253 PRAC2D3DTV9 90 aa6.33□□□□□ -1.4
SYNE1-206ENST00000367253 ATP11AUNQ6ZP68 121 aa6.33□□□□□ -1.4
SYNE1-206ENST00000367253 Q6ZTI0 123 aa6.33□□□□□ -1.4
SYNE1-206ENST00000367253 KIAA1549Q9HCM3 1950 aa6.33□□□□□ -1.4
SYNE1-206ENST00000367253 C9orf116Q5BN46 136 aaPredicted RBP6.32□□□□□ -1.4
SYNE1-206ENST00000367253 PIEZO2Q9H5I5 2752 aa6.32□□□□□ -1.4
SYNE1-206ENST00000367253 DSCAMO60469 2012 aa6.32□□□□□ -1.4
SYNE1-206ENST00000367253 LINC01554Q52M75 96 aa6.32□□□□□ -1.4
SYNE1-206ENST00000367253 CDKN2A-AS1Q9UH64 79 aa6.32□□□□□ -1.4
SYNE1-206ENST00000367253 IGLV3-1P01715 115 aa6.31□□□□□ -1.4
SYNE1-206ENST00000367253 Q6ZSR3 168 aa6.31□□□□□ -1.4
SYNE1-206ENST00000367253 COX8CQ7Z4L0 72 aa6.31□□□□□ -1.4
SYNE1-206ENST00000367253 C11orf53Q8IXP5 236 aa6.31□□□□□ -1.4
SYNE1-206ENST00000367253 TP53TG3Q9ULZ0 132 aa6.31□□□□□ -1.4
SYNE1-206ENST00000367253 CRIP2P52943 208 aaPredicted RBP6.31□□□□□ -1.4
SYNE1-206ENST00000367253 ZFAND2AQ8N6M9 145 aa6.31□□□□□ -1.4
SYNE1-206ENST00000367253 IGLV1-51P01701 117 aa6.31□□□□□ -1.4
SYNE1-206ENST00000367253 RSPO1Q2MKA7 263 aaPredicted RBP6.3□□□□□ -1.4
SYNE1-206ENST00000367253 TM2D3Q9BRN9 247 aa6.3□□□□□ -1.4
SYNE1-206ENST00000367253 LINC01556Q5JQF7 62 aa6.29□□□□□ -1.4
SYNE1-206ENST00000367253 CIRBP-AS1Q8TBR5 109 aa6.29□□□□□ -1.4
SYNE1-206ENST00000367253 ZNF503-AS2A6NEH8 195 aa6.29□□□□□ -1.4
SYNE1-206ENST00000367253 GDF5OSQ5U4N7 250 aa6.29□□□□□ -1.4
SYNE1-206ENST00000367253 SSBP3-AS1Q7Z2R9 100 aa6.29□□□□□ -1.4
SYNE1-206ENST00000367253 TRBV6-8A0A0A6YYG3 113 aa6.29□□□□□ -1.4
SYNE1-206ENST00000367253 USP9XQ93008 2570 aaPredicted RBP6.29□□□□□ -1.4
SYNE1-206ENST00000367253 TNRC6BQ9UPQ9 1833 aaKnown RBP6.28□□□□□ -1.4
SYNE1-206ENST00000367253 TRBV6-5A0A0K0K1A5 114 aa6.28□□□□□ -1.4
SYNE1-206ENST00000367253 IGLV4-3A0A075B6K6 122 aa6.28□□□□□ -1.4
SYNE1-206ENST00000367253 MKI67P46013 3256 aaKnown RBP6.27□□□□□ -1.41
SYNE1-206ENST00000367253 ARHGAP21Q5T5U3 1957 aa6.27□□□□□ -1.41
SYNE1-206ENST00000367253 Q6ZTC4 211 aa6.27□□□□□ -1.41
SYNE1-206ENST00000367253 KMT2EQ8IZD2 1858 aa6.27□□□□□ -1.41
SYNE1-206ENST00000367253 PROK1P58294 105 aa6.27□□□□□ -1.41
SYNE1-206ENST00000367253 MYO9AB2RTY4 2548 aa6.27□□□□□ -1.41
SYNE1-206ENST00000367253 IGLV9-49A0A0B4J1Y8 123 aa6.27□□□□□ -1.41
SYNE1-206ENST00000367253 Q6ZSN1 163 aa6.27□□□□□ -1.41
SYNE1-206ENST00000367253 M0R378 163 aa6.26□□□□□ -1.41
SYNE1-206ENST00000367253 IGLV2-14P01704 120 aa6.26□□□□□ -1.41
SYNE1-206ENST00000367253 HCFC1P51610 2035 aa6.26□□□□□ -1.41
SYNE1-206ENST00000367253 EPM2AB3EWF7 344 aa6.26□□□□□ -1.41
SYNE1-206ENST00000367253 RPL37AP61513 92 aaKnown RBP6.26□□□□□ -1.41
SYNE1-206ENST00000367253 FHL2Q14192 279 aa6.26□□□□□ -1.41
SYNE1-206ENST00000367253 C10orf25Q5T742 122 aa6.26□□□□□ -1.41
SYNE1-206ENST00000367253 KRTAP27-1Q3LI81 207 aa6.25□□□□□ -1.41
SYNE1-206ENST00000367253 UNQ9165/PRO28630Q6UXU0 137 aa6.25□□□□□ -1.41
SYNE1-206ENST00000367253 SBSPONQ8IVN8 264 aa6.25□□□□□ -1.41
SYNE1-206ENST00000367253 Q6ZRU5 148 aa6.25□□□□□ -1.41
SYNE1-206ENST00000367253 NTM-AS1Q6ZSK4 140 aa6.25□□□□□ -1.41
SYNE1-206ENST00000367253 LINC00467Q9BRT7 94 aa6.25□□□□□ -1.41
SYNE1-206ENST00000367253 PRR15Q8IV56 129 aa6.25□□□□□ -1.41
SYNE1-206ENST00000367253 ZNF80P51504 273 aaPredicted RBP6.24□□□□□ -1.41
SYNE1-206ENST00000367253 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.24□□□□□ -1.41
SYNE1-206ENST00000367253 XAGE1AQ9HD64 81 aa6.24□□□□□ -1.41
SYNE1-206ENST00000367253 ZNF580Q9UK33 172 aa6.24□□□□□ -1.41
SYNE1-206ENST00000367253 Q6ZRP5 223 aa6.23□□□□□ -1.41
SYNE1-206ENST00000367253 SMIM11BQ8TCY0 68 aa6.23□□□□□ -1.41
SYNE1-206ENST00000367253 C11orf1Q9H5F2 150 aa6.23□□□□□ -1.41
SYNE1-206ENST00000367253 Q8N2B8 174 aa6.23□□□□□ -1.41
SYNE1-206ENST00000367253 DEFB1P60022 68 aa6.22□□□□□ -1.41
SYNE1-206ENST00000367253 CYP4F30PQ9H0H9 118 aa6.22□□□□□ -1.41
SYNE1-206ENST00000367253 KIAA0087Q14695 138 aa6.22□□□□□ -1.41
SYNE1-206ENST00000367253 LINC00846Q9NV44 126 aa6.22□□□□□ -1.41
SYNE1-206ENST00000367253 PCOTHQ58A44 107 aa6.22□□□□□ -1.41
SYNE1-206ENST00000367253 EGFEM1PQ0D2K5 195 aa6.21□□□□□ -1.41
SYNE1-206ENST00000367253 RITA1Q96K30 269 aa6.21□□□□□ -1.42
SYNE1-206ENST00000367253 NBDYA0A0U1RRE5 68 aa6.21□□□□□ -1.42
SYNE1-206ENST00000367253 LAMA3Q16787 3333 aa6.2□□□□□ -1.42
SYNE1-206ENST00000367253 TET2Q6N021 2002 aaPredicted RBP6.2□□□□□ -1.42
SYNE1-206ENST00000367253 A0A1B0GU69 56 aa6.2□□□□□ -1.42
SYNE1-206ENST00000367253 Q6ZS46 218 aa6.19□□□□□ -1.42
SYNE1-206ENST00000367253 ACANP16112 2415 aa6.19□□□□□ -1.42
SYNE1-206ENST00000367253 IGLV1-40P01703 118 aa6.19□□□□□ -1.42
SYNE1-206ENST00000367253 EXPH5Q8NEV8 1989 aa6.19□□□□□ -1.42
SYNE1-206ENST00000367253 AVPP01185 164 aa6.19□□□□□ -1.42
SYNE1-206ENST00000367253 AGRNO00468 2067 aa6.19□□□□□ -1.42
SYNE1-206ENST00000367253 M0QY20 66 aa6.19□□□□□ -1.42
SYNE1-206ENST00000367253 EIF4EBP1Q13541 118 aaPredicted RBP6.19□□□□□ -1.42
SYNE1-206ENST00000367253 SPRNQ5BIV9 151 aa6.19□□□□□ -1.42
SYNE1-206ENST00000367253 TYMSOSQ8TAI1 123 aa6.19□□□□□ -1.42
SYNE1-206ENST00000367253 BRCA2P51587 3418 aa6.18□□□□□ -1.42
SYNE1-206ENST00000367253 KRTAP16-1A8MUX0 517 aa6.18□□□□□ -1.42
SYNE1-206ENST00000367253 WISP2O76076 250 aa6.18□□□□□ -1.42
SYNE1-206ENST00000367253 IGKV2-28A0A075B6P5 120 aa6.18□□□□□ -1.42
SYNE1-206ENST00000367253 IGKV2D-28P01615 120 aa6.18□□□□□ -1.42
SYNE1-206ENST00000367253 SMCPP49901 116 aaPredicted RBP6.18□□□□□ -1.42
SYNE1-206ENST00000367253 TRAV22A0A0B4J277 110 aa6.17□□□□□ -1.42
SYNE1-206ENST00000367253 LINC01547P58512 204 aaPredicted RBP6.17□□□□□ -1.42
SYNE1-206ENST00000367253 PRR26Q8N8Z3 221 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 569.6 ms