RNA–Protein interactions for RNA: ENST00000366892.5

PRKN-202, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-202ENST00000366892 IGHV1-58A0A0C4DH39 117 aa11.24□□□□□ -0.61
PRKN-202ENST00000366892 IGKV2-29A2NJV5 120 aaPredicted RBP11.24□□□□□ -0.61
PRKN-202ENST00000366892 GAGE10A6NGK3 116 aa11.24□□□□□ -0.61
PRKN-202ENST00000366892 K7EP34 96 aa11.24□□□□□ -0.61
PRKN-202ENST00000366892 UBE2D1P51668 147 aa11.24□□□□□ -0.61
PRKN-202ENST00000366892 SRSF9Q13242 221 aaKnown RBP eCLIP11.24□□□□□ -0.61
PRKN-202ENST00000366892 AMMECR1LQ6DCA0 310 aa11.24□□□□□ -0.61
PRKN-202ENST00000366892 Q6ZUT4 128 aa11.24□□□□□ -0.61
PRKN-202ENST00000366892 DEFB104AQ8WTQ1 72 aa11.24□□□□□ -0.61
PRKN-202ENST00000366892 GEMIN7Q9H840 131 aaKnown RBP11.24□□□□□ -0.61
PRKN-202ENST00000366892 TMEM238C9JI98 176 aa11.23□□□□□ -0.61
PRKN-202ENST00000366892 H3BUT2 72 aa11.23□□□□□ -0.61
PRKN-202ENST00000366892 HERVK_113P63121 156 aa11.23□□□□□ -0.61
PRKN-202ENST00000366892 Q8N814 137 aa11.23□□□□□ -0.61
PRKN-202ENST00000366892 TMEM243Q9BU79 118 aa11.23□□□□□ -0.61
PRKN-202ENST00000366892 XGP55808 180 aa11.22□□□□□ -0.61
PRKN-202ENST00000366892 IGLV5-52A0A0A0MRZ9 124 aa11.21□□□□□ -0.61
PRKN-202ENST00000366892 TSPEAR-AS2P59090 65 aa11.21□□□□□ -0.61
PRKN-202ENST00000366892 TMEM101Q96IK0 257 aa11.21□□□□□ -0.61
PRKN-202ENST00000366892 TRBV6-8A0A0A6YYG3 113 aa11.2□□□□□ -0.62
PRKN-202ENST00000366892 UBE2L6O14933 153 aa11.2□□□□□ -0.62
PRKN-202ENST00000366892 LYRM7Q5U5X0 104 aa11.2□□□□□ -0.62
PRKN-202ENST00000366892 NTN5Q8WTR8 489 aaPredicted RBP11.2□□□□□ -0.62
PRKN-202ENST00000366892 KLK12Q9UKR0 248 aa11.2□□□□□ -0.62
PRKN-202ENST00000366892 RAB37Q96AX2 223 aa11.19□□□□□ -0.62
PRKN-202ENST00000366892 WFDC2Q14508 124 aa11.19□□□□□ -0.62
PRKN-202ENST00000366892 SPCS1Q9Y6A9 102 aa11.19□□□□□ -0.62
PRKN-202ENST00000366892 TMEM262E9PQX1 116 aa11.18□□□□□ -0.62
PRKN-202ENST00000366892 TIMM17BO60830 172 aa11.18□□□□□ -0.62
PRKN-202ENST00000366892 RPL24P83731 157 aaKnown RBP11.17□□□□□ -0.62
PRKN-202ENST00000366892 NTM-AS1Q6ZSK4 140 aa11.17□□□□□ -0.62
PRKN-202ENST00000366892 UBE2WQ96B02 151 aa11.17□□□□□ -0.62
PRKN-202ENST00000366892 LECT2O14960 151 aa11.16□□□□□ -0.62
PRKN-202ENST00000366892 RMI2Q96E14 147 aa11.16□□□□□ -0.62
PRKN-202ENST00000366892 CDC42SE2Q9NRR3 84 aa11.16□□□□□ -0.62
PRKN-202ENST00000366892 IGKV2D-24A0A075B6R9 120 aa11.15□□□□□ -0.62
PRKN-202ENST00000366892 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.15□□□□□ -0.62
PRKN-202ENST00000366892 SPANXDQ9BXN6 97 aa11.15□□□□□ -0.62
PRKN-202ENST00000366892 SPANXCQ9NY87 97 aa11.15□□□□□ -0.62
PRKN-202ENST00000366892 A0A0J9YXY3 114 aa11.14□□□□□ -0.63
PRKN-202ENST00000366892 K7ERJ3 54 aa11.14□□□□□ -0.63
PRKN-202ENST00000366892 COPS9Q8WXC6 57 aa11.14□□□□□ -0.63
PRKN-202ENST00000366892 NDUFA12Q9UI09 145 aa11.14□□□□□ -0.63
PRKN-202ENST00000366892 VPS13BQ7Z7G8 4022 aa11.14□□□□□ -0.63
PRKN-202ENST00000366892 IGLV5-39A0A0G2JS06 123 aa11.14□□□□□ -0.63
PRKN-202ENST00000366892 EPM2AB3EWF7 344 aa11.14□□□□□ -0.63
PRKN-202ENST00000366892 CHCHD5Q9BSY4 110 aa11.14□□□□□ -0.63
PRKN-202ENST00000366892 A0A0B4J2C4 111 aa11.13□□□□□ -0.63
PRKN-202ENST00000366892 NDUFA1O15239 70 aa11.13□□□□□ -0.63
PRKN-202ENST00000366892 LINC00242Q5T6M2 205 aa11.13□□□□□ -0.63
PRKN-202ENST00000366892 ENHOQ6UWT2 76 aa11.13□□□□□ -0.63
PRKN-202ENST00000366892 IFITM1P13164 125 aa11.12□□□□□ -0.63
PRKN-202ENST00000366892 RNASE13Q5GAN3 156 aaKnown RBP11.12□□□□□ -0.63
PRKN-202ENST00000366892 PPDPFQ9H3Y8 114 aa11.12□□□□□ -0.63
PRKN-202ENST00000366892 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.11□□□□□ -0.63
PRKN-202ENST00000366892 CDKN2A-AS1Q9UH64 79 aa11.11□□□□□ -0.63
PRKN-202ENST00000366892 SMR3BP02814 79 aaPredicted RBP11.1□□□□□ -0.63
PRKN-202ENST00000366892 ANGP03950 147 aaKnown RBP11.1□□□□□ -0.63
PRKN-202ENST00000366892 SPINK8P0C7L1 97 aa11.1□□□□□ -0.63
PRKN-202ENST00000366892 HAMPP81172 84 aa11.1□□□□□ -0.63
PRKN-202ENST00000366892 CIRBPQ14011 172 aaKnown RBP11.1□□□□□ -0.63
PRKN-202ENST00000366892 FAM30AQ9NZY2 134 aa11.1□□□□□ -0.63
PRKN-202ENST00000366892 IGHV3-64A0A075B6Q5 118 aa11.09□□□□□ -0.63
PRKN-202ENST00000366892 HERV-K104P63124 156 aa11.09□□□□□ -0.63
PRKN-202ENST00000366892 GAGE6Q13070 117 aa11.09□□□□□ -0.63
PRKN-202ENST00000366892 SRRM2Q9UQ35 2752 aaKnown RBP11.09□□□□□ -0.63
PRKN-202ENST00000366892 CRPP02741 224 aa11.09□□□□□ -0.63
PRKN-202ENST00000366892 RBX1P62877 108 aa11.09□□□□□ -0.63
PRKN-202ENST00000366892 MIAQ16674 131 aa11.09□□□□□ -0.63
PRKN-202ENST00000366892 SFTA2Q6UW10 78 aa11.09□□□□□ -0.63
PRKN-202ENST00000366892 C1orf43Q9BWL3 253 aa11.09□□□□□ -0.63
PRKN-202ENST00000366892 A0A1B0GUV1 79 aa11.08□□□□□ -0.64
PRKN-202ENST00000366892 Q5VSD8 79 aa11.08□□□□□ -0.64
PRKN-202ENST00000366892 PRO1854Q9UHT4 67 aa11.08□□□□□ -0.64
PRKN-202ENST00000366892 SMIM1B2RUZ4 78 aa11.07□□□□□ -0.64
PRKN-202ENST00000366892 LITAFQ99732 161 aa11.07□□□□□ -0.64
PRKN-202ENST00000366892 NAA38Q9BRA0 125 aaKnown RBP11.07□□□□□ -0.64
PRKN-202ENST00000366892 TRBV20-1A0A075B6N2 111 aa11.06□□□□□ -0.64
PRKN-202ENST00000366892 TRAV13-1A0A0B4J241 112 aa11.06□□□□□ -0.64
PRKN-202ENST00000366892 F8W1H4 67 aa11.06□□□□□ -0.64
PRKN-202ENST00000366892 K7ERU9 68 aa11.06□□□□□ -0.64
PRKN-202ENST00000366892 CFC1BP0CG36 223 aa11.06□□□□□ -0.64
PRKN-202ENST00000366892 CFC1P0CG37 223 aa11.06□□□□□ -0.64
PRKN-202ENST00000366892 PRR34Q9NV39 138 aa11.06□□□□□ -0.64
PRKN-202ENST00000366892 APOMO95445 188 aa11.05□□□□□ -0.64
PRKN-202ENST00000366892 TSPAN13O95857 204 aa11.05□□□□□ -0.64
PRKN-202ENST00000366892 LINC01620Q4KN68 170 aa11.05□□□□□ -0.64
PRKN-202ENST00000366892 LINC01561Q8N1V8 128 aa11.05□□□□□ -0.64
PRKN-202ENST00000366892 LINC00269Q8N2A0 174 aa11.05□□□□□ -0.64
PRKN-202ENST00000366892 A4D1N5 150 aa11.04□□□□□ -0.64
PRKN-202ENST00000366892 COX6A2Q02221 97 aa11.04□□□□□ -0.64
PRKN-202ENST00000366892 Q6ZSA8 131 aa11.04□□□□□ -0.64
PRKN-202ENST00000366892 MUSTN1Q8IVN3 82 aa11.04□□□□□ -0.64
PRKN-202ENST00000366892 CLPSL2Q6UWE3 100 aa11.04□□□□□ -0.64
PRKN-202ENST00000366892 MYCBP2O75592 4640 aa11.03□□□□□ -0.64
PRKN-202ENST00000366892 FAM229AH3BQW9 127 aa11.02□□□□□ -0.65
PRKN-202ENST00000366892 INAFM2P0DMQ5 153 aa11.02□□□□□ -0.65
PRKN-202ENST00000366892 OCIAD2Q56VL3 154 aa11.02□□□□□ -0.65
PRKN-202ENST00000366892 KRTAP26-1Q6PEX3 210 aa11.02□□□□□ -0.65
PRKN-202ENST00000366892 REG3AQ06141 175 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms