RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 PARVGQ9HBI0 331 aa-3.96□□□□□ -3.04
RNU4-40P-201ENST00000364351 LINC01558Q9Y6Z2 57 aa-3.96□□□□□ -3.04
RNU4-40P-201ENST00000364351 A0A0G2JMZ2 1700 aa-3.96□□□□□ -3.04
RNU4-40P-201ENST00000364351 OVOS2A0A0G2JMS6 1433 aa-3.96□□□□□ -3.04
RNU4-40P-201ENST00000364351 TRBV20-1A0A075B6N2 111 aa-3.97□□□□□ -3.04
RNU4-40P-201ENST00000364351 SERPINB1P30740 379 aa-3.97□□□□□ -3.04
RNU4-40P-201ENST00000364351 PPP1R2P3Q6NXS1 205 aa-3.97□□□□□ -3.04
RNU4-40P-201ENST00000364351 TTC9CQ8N5M4 171 aa-3.97□□□□□ -3.04
RNU4-40P-201ENST00000364351 MBD5Q9P267 1494 aa-3.98□□□□□ -3.05
RNU4-40P-201ENST00000364351 VPS13CQ709C8 3753 aa-3.98□□□□□ -3.05
RNU4-40P-201ENST00000364351 IGLC7A0M8Q6 106 aa-3.98□□□□□ -3.05
RNU4-40P-201ENST00000364351 RRAS2P62070 204 aaPredicted RBP-3.98□□□□□ -3.05
RNU4-40P-201ENST00000364351 AQP10Q96PS8 301 aa-3.98□□□□□ -3.05
RNU4-40P-201ENST00000364351 SEC11CQ9BY50 192 aa-3.98□□□□□ -3.05
RNU4-40P-201ENST00000364351 SYNMO15061 1565 aa-3.98□□□□□ -3.05
RNU4-40P-201ENST00000364351 BTAF1O14981 1849 aa-3.99□□□□□ -3.05
RNU4-40P-201ENST00000364351 CTAGE3PQ8IX95 158 aa-3.99□□□□□ -3.05
RNU4-40P-201ENST00000364351 LINC01546A6NGU7 62 aa-4□□□□□ -3.05
RNU4-40P-201ENST00000364351 IL5P05113 134 aa-4□□□□□ -3.05
RNU4-40P-201ENST00000364351 REEP5Q00765 189 aa-4□□□□□ -3.05
RNU4-40P-201ENST00000364351 TMEM244Q5VVB8 128 aa-4□□□□□ -3.05
RNU4-40P-201ENST00000364351 COPZ2Q9P299 210 aa-4□□□□□ -3.05
RNU4-40P-201ENST00000364351 QRICH2Q9H0J4 1663 aa-4□□□□□ -3.05
RNU4-40P-201ENST00000364351 SEC11AP67812 179 aa-4.01□□□□□ -3.05
RNU4-40P-201ENST00000364351 DEFB106AQ8N104 65 aa-4.01□□□□□ -3.05
RNU4-40P-201ENST00000364351 MAGOHBQ96A72 148 aaKnown RBP-4.01□□□□□ -3.05
RNU4-40P-201ENST00000364351 FAM167A-AS1Q96KT0 104 aa-4.01□□□□□ -3.05
RNU4-40P-201ENST00000364351 IFT140Q96RY7 1462 aa-4.01□□□□□ -3.05
RNU4-40P-201ENST00000364351 UBA52P62987 128 aaKnown RBP-4.02□□□□□ -3.05
RNU4-40P-201ENST00000364351 NMSQ5H8A3 153 aa-4.02□□□□□ -3.05
RNU4-40P-201ENST00000364351 TIAM2Q8IVF5 1701 aa-4.02□□□□□ -3.05
RNU4-40P-201ENST00000364351 DCHS1Q96JQ0 3298 aa-4.02□□□□□ -3.05
RNU4-40P-201ENST00000364351 TMEM2Q9UHN6 1383 aa-4.02□□□□□ -3.05
RNU4-40P-201ENST00000364351 NLRP1Q9C000 1473 aa-4.03□□□□□ -3.05
RNU4-40P-201ENST00000364351 FRYLO94915 3013 aa-4.03□□□□□ -3.05
RNU4-40P-201ENST00000364351 OR8I2Q8N0Y5 310 aa-4.03□□□□□ -3.05
RNU4-40P-201ENST00000364351 TRAV13-2A0A0B4J235 113 aa-4.04□□□□□ -3.06
RNU4-40P-201ENST00000364351 SFT2D2O95562 160 aa-4.04□□□□□ -3.06
RNU4-40P-201ENST00000364351 C5orf38Q86SI9 138 aa-4.04□□□□□ -3.06
RNU4-40P-201ENST00000364351 FAM223AQ8IWN6 122 aa-4.04□□□□□ -3.06
RNU4-40P-201ENST00000364351 MNS1Q8NEH6 495 aa-4.04□□□□□ -3.06
RNU4-40P-201ENST00000364351 OR9Q1Q8NGQ5 310 aa-4.04□□□□□ -3.06
RNU4-40P-201ENST00000364351 SAR1AQ9NR31 198 aa-4.04□□□□□ -3.06
RNU4-40P-201ENST00000364351 MYH13Q9UKX3 1938 aa-4.04□□□□□ -3.06
RNU4-40P-201ENST00000364351 DOCK2Q92608 1830 aa-4.05□□□□□ -3.06
RNU4-40P-201ENST00000364351 PCNTO95613 3336 aa-4.05□□□□□ -3.06
RNU4-40P-201ENST00000364351 SPTY2D1-AS1A0A0U1RR47 76 aa-4.05□□□□□ -3.06
RNU4-40P-201ENST00000364351 M0R129 80 aa-4.05□□□□□ -3.06
RNU4-40P-201ENST00000364351 SNCGO76070 127 aa-4.05□□□□□ -3.06
RNU4-40P-201ENST00000364351 SNCAP37840 140 aa-4.05□□□□□ -3.06
RNU4-40P-201ENST00000364351 PSME4Q14997 1843 aa-4.05□□□□□ -3.06
RNU4-40P-201ENST00000364351 XRN1Q8IZH2 1706 aaKnown RBP-4.06□□□□□ -3.06
RNU4-40P-201ENST00000364351 LOC100130705A0A1B0GUX0 176 aa-4.06□□□□□ -3.06
RNU4-40P-201ENST00000364351 SPTSSAQ969W0 71 aa-4.06□□□□□ -3.06
RNU4-40P-201ENST00000364351 PRO1933Q9H354 126 aa-4.06□□□□□ -3.06
RNU4-40P-201ENST00000364351 SYNJ1O43426 1573 aa-4.06□□□□□ -3.06
RNU4-40P-201ENST00000364351 CEP170BQ9Y4F5 1589 aaPredicted RBP-4.06□□□□□ -3.06
RNU4-40P-201ENST00000364351 EP400Q96L91 3159 aa-4.06□□□□□ -3.06
RNU4-40P-201ENST00000364351 COX6B2Q6YFQ2 88 aa-4.07□□□□□ -3.06
RNU4-40P-201ENST00000364351 PRG4Q92954 1404 aaPredicted RBP-4.07□□□□□ -3.06
RNU4-40P-201ENST00000364351 PRDM15P57071 1507 aaPredicted RBP-4.07□□□□□ -3.06
RNU4-40P-201ENST00000364351 MYH6P13533 1939 aa-4.07□□□□□ -3.06
RNU4-40P-201ENST00000364351 MUC3AQ02505 3323 aa-4.08□□□□□ -3.06
RNU4-40P-201ENST00000364351 A0A1B0GU69 56 aa-4.08□□□□□ -3.06
RNU4-40P-201ENST00000364351 NDUFA3O95167 84 aa-4.08□□□□□ -3.06
RNU4-40P-201ENST00000364351 HIST1H1DP16402 221 aaKnown RBP-4.08□□□□□ -3.06
RNU4-40P-201ENST00000364351 CUX1P39880 1505 aa-4.08□□□□□ -3.06
RNU4-40P-201ENST00000364351 TAC4Q86UU9 113 aa-4.08□□□□□ -3.06
RNU4-40P-201ENST00000364351 LCN9Q8WX39 176 aa-4.08□□□□□ -3.06
RNU4-40P-201ENST00000364351 ARAP2Q8WZ64 1704 aa-4.08□□□□□ -3.06
RNU4-40P-201ENST00000364351 DYNLRB1Q9NP97 96 aa-4.08□□□□□ -3.06
RNU4-40P-201ENST00000364351 C1orf167Q5SNV9 1468 aa-4.09□□□□□ -3.06
RNU4-40P-201ENST00000364351 EIF3AQ14152 1382 aaKnown RBP-4.09□□□□□ -3.06
RNU4-40P-201ENST00000364351 UBE2L5PA0A1B0GUS4 154 aa-4.09□□□□□ -3.06
RNU4-40P-201ENST00000364351 NDUFB6O95139 128 aa-4.09□□□□□ -3.06
RNU4-40P-201ENST00000364351 BOLA2Q9H3K6 86 aa-4.09□□□□□ -3.06
RNU4-40P-201ENST00000364351 HMGN4O00479 90 aa-4.1□□□□□ -3.07
RNU4-40P-201ENST00000364351 NCS1P62166 190 aa-4.1□□□□□ -3.07
RNU4-40P-201ENST00000364351 TCTE3Q8IZS6 198 aa-4.1□□□□□ -3.07
RNU4-40P-201ENST00000364351 PRO3102Q9H379 93 aa-4.1□□□□□ -3.07
RNU4-40P-201ENST00000364351 PSENENQ9NZ42 101 aa-4.1□□□□□ -3.07
RNU4-40P-201ENST00000364351 EDC4Q6P2E9 1401 aaKnown RBP-4.11□□□□□ -3.07
RNU4-40P-201ENST00000364351 K7EP13 123 aa-4.11□□□□□ -3.07
RNU4-40P-201ENST00000364351 MRPS25P82663 173 aaKnown RBP-4.11□□□□□ -3.07
RNU4-40P-201ENST00000364351 TMEM35BQ8NCS4 154 aa-4.11□□□□□ -3.07
RNU4-40P-201ENST00000364351 HOPXQ9BPY8 73 aaPredicted RBP-4.11□□□□□ -3.07
RNU4-40P-201ENST00000364351 PSMG3Q9BT73 122 aaPredicted RBP-4.11□□□□□ -3.07
RNU4-40P-201ENST00000364351 FAIMQ9NVQ4 179 aa-4.11□□□□□ -3.07
RNU4-40P-201ENST00000364351 V9GYQ6 96 aa-4.11□□□□□ -3.07
RNU4-40P-201ENST00000364351 C4AP0C0L4 1744 aa-4.12□□□□□ -3.07
RNU4-40P-201ENST00000364351 C4BP0C0L5 1744 aa-4.12□□□□□ -3.07
RNU4-40P-201ENST00000364351 MGST2Q99735 147 aa-4.12□□□□□ -3.07
RNU4-40P-201ENST00000364351 ZNF518AQ6AHZ1 1483 aa-4.12□□□□□ -3.07
RNU4-40P-201ENST00000364351 LRRC37AA6NMS7 1700 aa-4.12□□□□□ -3.07
RNU4-40P-201ENST00000364351 CEP250Q9BV73 2442 aa-4.13□□□□□ -3.07
RNU4-40P-201ENST00000364351 SMPXQ9UHP9 88 aa-4.13□□□□□ -3.07
RNU4-40P-201ENST00000364351 PLEKHH2Q8IVE3 1493 aa-4.13□□□□□ -3.07
RNU4-40P-201ENST00000364351 IGLC1P0CG04 106 aa-4.14□□□□□ -3.07
RNU4-40P-201ENST00000364351 SCGB1A1P11684 91 aa-4.14□□□□□ -3.07
RNU4-40P-201ENST00000364351 WHAMMP3Q1A5X7 153 aa-4.14□□□□□ -3.07
Retrieved 100 of 20,778 RNA–protein pairs in 251.8 ms