RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 PAPPA2Q9BXP8 1791 aa-1.08□□□□□ -2.58
RNU6-560P-201ENST00000364007 DIP2CQ9Y2E4 1556 aa-1.08□□□□□ -2.58
RNU6-560P-201ENST00000364007 CHD1O14646 1710 aa-1.09□□□□□ -2.58
RNU6-560P-201ENST00000364007 SFTA2Q6UW10 78 aa-1.09□□□□□ -2.58
RNU6-560P-201ENST00000364007 FAM167A-AS1Q96KT0 104 aa-1.09□□□□□ -2.58
RNU6-560P-201ENST00000364007 DPH3P1Q9H4G8 78 aa-1.09□□□□□ -2.58
RNU6-560P-201ENST00000364007 NBEAL1Q6ZS30 2694 aa-1.09□□□□□ -2.58
RNU6-560P-201ENST00000364007 SETBP1Q9Y6X0 1596 aa-1.09□□□□□ -2.58
RNU6-560P-201ENST00000364007 STAB2Q8WWQ8 2551 aa-1.09□□□□□ -2.58
RNU6-560P-201ENST00000364007 ADGRL2O95490 1459 aa-1.1□□□□□ -2.59
RNU6-560P-201ENST00000364007 SNAPC5O75971 98 aa-1.1□□□□□ -2.59
RNU6-560P-201ENST00000364007 Q0VG73 95 aa-1.1□□□□□ -2.59
RNU6-560P-201ENST00000364007 MANBALQ9NQG1 85 aa-1.1□□□□□ -2.59
RNU6-560P-201ENST00000364007 SCAPERQ9BY12 1400 aa-1.1□□□□□ -2.59
RNU6-560P-201ENST00000364007 CC2D2AQ9P2K1 1620 aa-1.11□□□□□ -2.59
RNU6-560P-201ENST00000364007 SYS1-DBNDD2H3BUS1 97 aa-1.11□□□□□ -2.59
RNU6-560P-201ENST00000364007 ATP5EP56381 51 aaPredicted RBP-1.11□□□□□ -2.59
RNU6-560P-201ENST00000364007 SVEP1Q4LDE5 3571 aa-1.11□□□□□ -2.59
RNU6-560P-201ENST00000364007 FLGP20930 4061 aaPredicted RBP-1.12□□□□□ -2.59
RNU6-560P-201ENST00000364007 FAM24AA6NFZ4 105 aa-1.13□□□□□ -2.59
RNU6-560P-201ENST00000364007 FAM223BA6NKX1 122 aa-1.13□□□□□ -2.59
RNU6-560P-201ENST00000364007 PRO1933Q9H354 126 aa-1.13□□□□□ -2.59
RNU6-560P-201ENST00000364007 NLRP1Q9C000 1473 aa-1.13□□□□□ -2.59
RNU6-560P-201ENST00000364007 ABCA3Q99758 1704 aa-1.14□□□□□ -2.59
RNU6-560P-201ENST00000364007 PKHD1P08F94 4074 aa-1.14□□□□□ -2.59
RNU6-560P-201ENST00000364007 UBE2D3P61077 147 aa-1.14□□□□□ -2.59
RNU6-560P-201ENST00000364007 UBE2D2P62837 147 aa-1.14□□□□□ -2.59
RNU6-560P-201ENST00000364007 PCNX1Q96RV3 2341 aa-1.14□□□□□ -2.59
RNU6-560P-201ENST00000364007 NRKQ7Z2Y5 1582 aa-1.14□□□□□ -2.59
RNU6-560P-201ENST00000364007 SPHKAPQ2M3C7 1700 aa-1.15□□□□□ -2.59
RNU6-560P-201ENST00000364007 TOPAZ1Q8N9V7 1692 aa-1.16□□□□□ -2.59
RNU6-560P-201ENST00000364007 F6UZH7 168 aa-1.16□□□□□ -2.6
RNU6-560P-201ENST00000364007 TRAPPC2P0DI81 140 aa-1.16□□□□□ -2.6
RNU6-560P-201ENST00000364007 TRAPPC2BP0DI82 140 aa-1.16□□□□□ -2.6
RNU6-560P-201ENST00000364007 COX8AP10176 69 aa-1.16□□□□□ -2.6
RNU6-560P-201ENST00000364007 RPL13AP3Q6NVV1 102 aa-1.16□□□□□ -2.6
RNU6-560P-201ENST00000364007 APLNQ9ULZ1 77 aa-1.16□□□□□ -2.6
RNU6-560P-201ENST00000364007 MRC2Q9UBG0 1479 aa-1.17□□□□□ -2.6
RNU6-560P-201ENST00000364007 A0A1B0GWA3 101 aa-1.17□□□□□ -2.6
RNU6-560P-201ENST00000364007 USMG5Q96IX5 58 aa-1.17□□□□□ -2.6
RNU6-560P-201ENST00000364007 HECTD1Q9ULT8 2610 aa-1.17□□□□□ -2.6
RNU6-560P-201ENST00000364007 PLEKHH2Q8IVE3 1493 aa-1.18□□□□□ -2.6
RNU6-560P-201ENST00000364007 SONP18583 2426 aaKnown RBP-1.18□□□□□ -2.6
RNU6-560P-201ENST00000364007 USP9YO00507 2555 aaPredicted RBP-1.18□□□□□ -2.6
RNU6-560P-201ENST00000364007 COX6CP09669 75 aa-1.18□□□□□ -2.6
RNU6-560P-201ENST00000364007 PRO1854Q9UHT4 67 aa-1.18□□□□□ -2.6
RNU6-560P-201ENST00000364007 COL4A6Q14031 1691 aa-1.19□□□□□ -2.6
RNU6-560P-201ENST00000364007 A0A1B0GV90 55 aa-1.19□□□□□ -2.6
RNU6-560P-201ENST00000364007 ARHGAP5Q13017 1502 aa-1.2□□□□□ -2.6
RNU6-560P-201ENST00000364007 EIF4G3O43432 1585 aaKnown RBP-1.2□□□□□ -2.6
RNU6-560P-201ENST00000364007 NAP1L6A6NFF2 107 aa-1.2□□□□□ -2.6
RNU6-560P-201ENST00000364007 SEC11AP67812 179 aa-1.2□□□□□ -2.6
RNU6-560P-201ENST00000364007 SVBPQ8N300 66 aa-1.2□□□□□ -2.6
RNU6-560P-201ENST00000364007 IER3IP1Q9Y5U9 82 aa-1.2□□□□□ -2.6
RNU6-560P-201ENST00000364007 KNDC1Q76NI1 1749 aa-1.2□□□□□ -2.6
RNU6-560P-201ENST00000364007 COL14A1Q05707 1796 aaKnown RBP-1.21□□□□□ -2.6
RNU6-560P-201ENST00000364007 NBPF19A0A087WUL8 3843 aa-1.21□□□□□ -2.6
RNU6-560P-201ENST00000364007 DLEU1O43261 78 aa-1.21□□□□□ -2.6
RNU6-560P-201ENST00000364007 C12orf57Q99622 126 aa-1.21□□□□□ -2.6
RNU6-560P-201ENST00000364007 TGP01266 2768 aa-1.21□□□□□ -2.6
RNU6-560P-201ENST00000364007 CPSF4LA6NMK7 179 aaKnown RBP-1.22□□□□□ -2.6
RNU6-560P-201ENST00000364007 GNG4P50150 75 aa-1.22□□□□□ -2.6
RNU6-560P-201ENST00000364007 PPP3R1P63098 170 aa-1.23□□□□□ -2.61
RNU6-560P-201ENST00000364007 KIAA1551Q9HCM1 1747 aa-1.23□□□□□ -2.61
RNU6-560P-201ENST00000364007 CRYM-AS1A6NIL9 109 aa-1.24□□□□□ -2.61
RNU6-560P-201ENST00000364007 SAA2P0DJI9 122 aaPredicted RBP-1.24□□□□□ -2.61
RNU6-560P-201ENST00000364007 KRTAP6-2Q3LI66 62 aa-1.24□□□□□ -2.61
RNU6-560P-201ENST00000364007 LAMA2P24043 3122 aaKnown RBP-1.24□□□□□ -2.61
RNU6-560P-201ENST00000364007 A0A087WVE0 104 aa-1.25□□□□□ -2.61
RNU6-560P-201ENST00000364007 CRIPTQ9P021 101 aa-1.25□□□□□ -2.61
RNU6-560P-201ENST00000364007 EPG5Q9HCE0 2579 aa-1.25□□□□□ -2.61
RNU6-560P-201ENST00000364007 PZPP20742 1482 aa-1.25□□□□□ -2.61
RNU6-560P-201ENST00000364007 TARBP1Q13395 1621 aaKnown RBP-1.26□□□□□ -2.61
RNU6-560P-201ENST00000364007 A0A1B0GU69 56 aa-1.26□□□□□ -2.61
RNU6-560P-201ENST00000364007 LINC00846Q9NV44 126 aa-1.26□□□□□ -2.61
RNU6-560P-201ENST00000364007 SHPRHQ149N8 1683 aa-1.26□□□□□ -2.61
RNU6-560P-201ENST00000364007 MON2Q7Z3U7 1717 aa-1.26□□□□□ -2.61
RNU6-560P-201ENST00000364007 ITPR3Q14573 2671 aa-1.27□□□□□ -2.61
RNU6-560P-201ENST00000364007 MXRA5Q9NR99 2828 aa-1.27□□□□□ -2.61
RNU6-560P-201ENST00000364007 CORTO00230 105 aa-1.27□□□□□ -2.61
RNU6-560P-201ENST00000364007 S100A1P23297 94 aa-1.27□□□□□ -2.61
RNU6-560P-201ENST00000364007 SPRR2AP35326 72 aa-1.27□□□□□ -2.61
RNU6-560P-201ENST00000364007 SNCAP37840 140 aa-1.27□□□□□ -2.61
RNU6-560P-201ENST00000364007 DEFB135Q30KP9 77 aa-1.27□□□□□ -2.61
RNU6-560P-201ENST00000364007 NKTRP30414 1462 aaKnown RBP-1.27□□□□□ -2.61
RNU6-560P-201ENST00000364007 MAPKBP1O60336 1514 aa-1.27□□□□□ -2.61
RNU6-560P-201ENST00000364007 DNHD1Q96M86 4753 aa-1.27□□□□□ -2.61
RNU6-560P-201ENST00000364007 TEP1Q99973 2627 aaKnown RBP-1.28□□□□□ -2.61
RNU6-560P-201ENST00000364007 KIF20BQ96Q89 1820 aa-1.29□□□□□ -2.62
RNU6-560P-201ENST00000364007 EFCAB10A6NFE3 127 aa-1.29□□□□□ -2.62
RNU6-560P-201ENST00000364007 H1FX-AS1Q4G0G2 97 aa-1.29□□□□□ -2.62
RNU6-560P-201ENST00000364007 RGPD2P0DJD1 1756 aa-1.29□□□□□ -2.62
RNU6-560P-201ENST00000364007 ABCA13Q86UQ4 5058 aa-1.29□□□□□ -2.62
RNU6-560P-201ENST00000364007 CCDC141Q6ZP82 1450 aa-1.3□□□□□ -2.62
RNU6-560P-201ENST00000364007 HSD52Q0P140 79 aa-1.3□□□□□ -2.62
RNU6-560P-201ENST00000364007 LRRC37AA6NMS7 1700 aa-1.3□□□□□ -2.62
RNU6-560P-201ENST00000364007 NBASA2RRP1 2371 aa-1.31□□□□□ -2.62
RNU6-560P-201ENST00000364007 C6orf201Q7Z4U5 140 aa-1.31□□□□□ -2.62
RNU6-560P-201ENST00000364007 EDC4Q6P2E9 1401 aaKnown RBP-1.32□□□□□ -2.62
RNU6-560P-201ENST00000364007 MUC17Q685J3 4493 aa-1.32□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms