RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 HERV-K104P63124 156 aa9.29□□□□□ -0.92
PDLIM5-203ENST00000359265 TAL2Q16559 108 aa9.29□□□□□ -0.92
PDLIM5-203ENST00000359265 SFTA2Q6UW10 78 aa9.29□□□□□ -0.92
PDLIM5-203ENST00000359265 Q8IZM0 81 aa9.29□□□□□ -0.92
PDLIM5-203ENST00000359265 ORAOV1Q8WV07 137 aa9.29□□□□□ -0.92
PDLIM5-203ENST00000359265 RMI2Q96E14 147 aa9.29□□□□□ -0.92
PDLIM5-203ENST00000359265 KRTAP4-5Q9BYR2 181 aa9.29□□□□□ -0.92
PDLIM5-203ENST00000359265 KMT2AQ03164 3969 aa9.28□□□□□ -0.92
PDLIM5-203ENST00000359265 A0A0J9YXY3 114 aa9.28□□□□□ -0.92
PDLIM5-203ENST00000359265 TMEM238C9JI98 176 aa9.28□□□□□ -0.92
PDLIM5-203ENST00000359265 HINT1P49773 126 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-203ENST00000359265 SNHG12Q9BXW3 62 aa9.28□□□□□ -0.92
PDLIM5-203ENST00000359265 Q9HAA7 133 aa9.28□□□□□ -0.92
PDLIM5-203ENST00000359265 SPANXB1Q9NS25 103 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-203ENST00000359265 IGKV2D-24A0A075B6R9 120 aa9.27□□□□□ -0.93
PDLIM5-203ENST00000359265 EREGO14944 169 aa9.27□□□□□ -0.93
PDLIM5-203ENST00000359265 BATFQ16520 125 aa9.27□□□□□ -0.93
PDLIM5-203ENST00000359265 CFAP161Q6P656 301 aa9.27□□□□□ -0.93
PDLIM5-203ENST00000359265 KRTAP26-1Q6PEX3 210 aa9.27□□□□□ -0.93
PDLIM5-203ENST00000359265 ZNF625Q96I27 306 aaPredicted RBP9.27□□□□□ -0.93
PDLIM5-203ENST00000359265 HIST1H4GQ99525 98 aa9.27□□□□□ -0.93
PDLIM5-203ENST00000359265 CXCL5P42830 114 aa9.26□□□□□ -0.93
PDLIM5-203ENST00000359265 C6orf226Q5I0X4 101 aa9.26□□□□□ -0.93
PDLIM5-203ENST00000359265 BVES-AS1Q5T3Y7 98 aa9.26□□□□□ -0.93
PDLIM5-203ENST00000359265 TIMM17BO60830 172 aa9.25□□□□□ -0.93
PDLIM5-203ENST00000359265 SRSF9Q13242 221 aaKnown RBP eCLIP9.25□□□□□ -0.93
PDLIM5-203ENST00000359265 CIRBPQ14011 172 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-203ENST00000359265 GCSHP23434 173 aa9.24□□□□□ -0.93
PDLIM5-203ENST00000359265 SPAG11BQ08648 103 aa9.24□□□□□ -0.93
PDLIM5-203ENST00000359265 C4orf48Q5BLP8 95 aa9.24□□□□□ -0.93
PDLIM5-203ENST00000359265 TTC32Q5I0X7 151 aa9.24□□□□□ -0.93
PDLIM5-203ENST00000359265 MEIG1Q5JSS6 88 aa9.24□□□□□ -0.93
PDLIM5-203ENST00000359265 CEND1Q8N111 149 aa9.24□□□□□ -0.93
PDLIM5-203ENST00000359265 CKS1BP61024 79 aa9.23□□□□□ -0.93
PDLIM5-203ENST00000359265 LBHQ53QV2 105 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-203ENST00000359265 KIAA0087Q14695 138 aa9.22□□□□□ -0.93
PDLIM5-203ENST00000359265 SPANXDQ9BXN6 97 aa9.22□□□□□ -0.93
PDLIM5-203ENST00000359265 SPANXCQ9NY87 97 aa9.22□□□□□ -0.93
PDLIM5-203ENST00000359265 COX11Q9Y6N1 276 aa9.22□□□□□ -0.93
PDLIM5-203ENST00000359265 PTTG1IPP53801 180 aa9.21□□□□□ -0.94
PDLIM5-203ENST00000359265 Q6ZVH6 145 aa9.21□□□□□ -0.94
PDLIM5-203ENST00000359265 LITAFQ99732 161 aa9.21□□□□□ -0.94
PDLIM5-203ENST00000359265 TM2D2Q9BX73 214 aa9.21□□□□□ -0.94
PDLIM5-203ENST00000359265 TMEM238LA0A1B0GVL6 79 aa9.2□□□□□ -0.94
PDLIM5-203ENST00000359265 A6NDN8 102 aa9.2□□□□□ -0.94
PDLIM5-203ENST00000359265 A6NJY4 79 aa9.2□□□□□ -0.94
PDLIM5-203ENST00000359265 LINC00476Q8WZB0 136 aa9.2□□□□□ -0.94
PDLIM5-203ENST00000359265 NBDYA0A0U1RRE5 68 aa9.19□□□□□ -0.94
PDLIM5-203ENST00000359265 ZNF561-AS1K7EIQ3 104 aa9.19□□□□□ -0.94
PDLIM5-203ENST00000359265 LY6G6CO95867 125 aa9.19□□□□□ -0.94
PDLIM5-203ENST00000359265 FXYD2P54710 66 aa9.19□□□□□ -0.94
PDLIM5-203ENST00000359265 COL5A1-AS1Q5SY13 56 aa9.19□□□□□ -0.94
PDLIM5-203ENST00000359265 C2orf82Q6UX34 121 aa9.19□□□□□ -0.94
PDLIM5-203ENST00000359265 C15orf56Q8N910 161 aa9.19□□□□□ -0.94
PDLIM5-203ENST00000359265 KRTAP1-5Q9BYS1 174 aa9.19□□□□□ -0.94
PDLIM5-203ENST00000359265 SMIM13P0DJ93 91 aa9.18□□□□□ -0.94
PDLIM5-203ENST00000359265 IFITM1P13164 125 aa9.18□□□□□ -0.94
PDLIM5-203ENST00000359265 RPL24P83731 157 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-203ENST00000359265 ADAMTSL4-AS1Q5T5F5 129 aa9.18□□□□□ -0.94
PDLIM5-203ENST00000359265 COPS9Q8WXC6 57 aa9.18□□□□□ -0.94
PDLIM5-203ENST00000359265 ERG28Q9UKR5 140 aa9.18□□□□□ -0.94
PDLIM5-203ENST00000359265 HERC1Q15751 4861 aa9.17□□□□□ -0.94
PDLIM5-203ENST00000359265 GVQW2A0A096LPI5 108 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-203ENST00000359265 F8WDY8 70 aa9.17□□□□□ -0.94
PDLIM5-203ENST00000359265 HIGD2BQ4VC39 106 aa9.17□□□□□ -0.94
PDLIM5-203ENST00000359265 NTN5Q8WTR8 489 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-203ENST00000359265 A0A0U1RRA0 63 aa9.16□□□□□ -0.94
PDLIM5-203ENST00000359265 LINC00158P58513 81 aa9.16□□□□□ -0.94
PDLIM5-203ENST00000359265 MUSTN1Q8IVN3 82 aa9.16□□□□□ -0.94
PDLIM5-203ENST00000359265 C6orf223Q8N319 242 aa9.16□□□□□ -0.94
PDLIM5-203ENST00000359265 C2orf48Q96LS8 159 aa9.16□□□□□ -0.94
PDLIM5-203ENST00000359265 USP17L23D6RBM5 183 aa9.15□□□□□ -0.94
PDLIM5-203ENST00000359265 COX17Q14061 63 aa9.15□□□□□ -0.94
PDLIM5-203ENST00000359265 DAND5Q8N907 189 aa9.15□□□□□ -0.94
PDLIM5-203ENST00000359265 LINC00526Q96FQ7 95 aa9.15□□□□□ -0.94
PDLIM5-203ENST00000359265 CAMK2N2Q96S95 79 aa9.15□□□□□ -0.94
PDLIM5-203ENST00000359265 NHP2Q9NX24 153 aaKnown RBP9.15□□□□□ -0.94
PDLIM5-203ENST00000359265 DYNC1H1Q14204 4646 aaKnown RBP9.15□□□□□ -0.94
PDLIM5-203ENST00000359265 VPS13DQ5THJ4 4388 aa9.15□□□□□ -0.95
PDLIM5-203ENST00000359265 PSCAO43653 123 aa9.14□□□□□ -0.95
PDLIM5-203ENST00000359265 PFN2P35080 140 aa9.14□□□□□ -0.95
PDLIM5-203ENST00000359265 NPC2P61916 151 aa9.14□□□□□ -0.95
PDLIM5-203ENST00000359265 UNQ6190/PRO20217Q6UXQ8 127 aa9.14□□□□□ -0.95
PDLIM5-203ENST00000359265 MIR7-3HGQ8N6C7 128 aa9.14□□□□□ -0.95
PDLIM5-203ENST00000359265 PPDPFQ9H3Y8 114 aa9.14□□□□□ -0.95
PDLIM5-203ENST00000359265 TRBV30A0A0K0K1B3 111 aa9.13□□□□□ -0.95
PDLIM5-203ENST00000359265 LINC00308Q8TCZ7 52 aa9.13□□□□□ -0.95
PDLIM5-203ENST00000359265 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.12□□□□□ -0.95
PDLIM5-203ENST00000359265 A4D1N5 150 aa9.12□□□□□ -0.95
PDLIM5-203ENST00000359265 C10orf25Q5T742 122 aa9.12□□□□□ -0.95
PDLIM5-203ENST00000359265 A0A1B0GWB2 263 aa9.11□□□□□ -0.95
PDLIM5-203ENST00000359265 M0R2N4 97 aa9.11□□□□□ -0.95
PDLIM5-203ENST00000359265 C6orf48Q9UBA6 75 aa9.11□□□□□ -0.95
PDLIM5-203ENST00000359265 K7ERJ3 54 aa9.1□□□□□ -0.95
PDLIM5-203ENST00000359265 SYCNQ0VAF6 134 aa9.1□□□□□ -0.95
PDLIM5-203ENST00000359265 SOSTDC1Q6X4U4 206 aa9.1□□□□□ -0.95
PDLIM5-203ENST00000359265 Q6ZR54 194 aa9.1□□□□□ -0.95
PDLIM5-203ENST00000359265 PKHD1P08F94 4074 aa9.09□□□□□ -0.95
PDLIM5-203ENST00000359265 A0A0B4J2C4 111 aa9.09□□□□□ -0.95
PDLIM5-203ENST00000359265 TAX1BP3O14907 124 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms