RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 PAX4O43316 350 aa14.27□□□□□ -0.12
COL13A1-202ENST00000357811 CCL18P55774 89 aa14.27□□□□□ -0.12
COL13A1-202ENST00000357811 COPS9Q8WXC6 57 aa14.27□□□□□ -0.12
COL13A1-202ENST00000357811 LINC01600Q96MT4 127 aa14.26□□□□□ -0.13
COL13A1-202ENST00000357811 C6orf226Q5I0X4 101 aa14.26□□□□□ -0.13
COL13A1-202ENST00000357811 TMEM126AQ9H061 195 aa14.25□□□□□ -0.13
COL13A1-202ENST00000357811 IGLV10-54A0A075B6I4 117 aa14.25□□□□□ -0.13
COL13A1-202ENST00000357811 LOC107984640A0A0U1RRK4 108 aa14.25□□□□□ -0.13
COL13A1-202ENST00000357811 C9orf153Q5TBE3 101 aa14.25□□□□□ -0.13
COL13A1-202ENST00000357811 SMIM11BQ8TCY0 68 aa14.25□□□□□ -0.13
COL13A1-202ENST00000357811 A0A087WYN8 130 aa14.25□□□□□ -0.13
COL13A1-202ENST00000357811 LINC00959A0A1B0GUT2 108 aa14.25□□□□□ -0.13
COL13A1-202ENST00000357811 CMC4P56277 68 aaPredicted RBP14.25□□□□□ -0.13
COL13A1-202ENST00000357811 C16orf95Q9H693 158 aa14.24□□□□□ -0.13
COL13A1-202ENST00000357811 TEP1Q99973 2627 aaKnown RBP14.24□□□□□ -0.13
COL13A1-202ENST00000357811 MRPL23Q16540 153 aaKnown RBP14.23□□□□□ -0.13
COL13A1-202ENST00000357811 PRR3P79522 188 aaKnown RBP14.23□□□□□ -0.13
COL13A1-202ENST00000357811 TRAV13-2A0A0B4J235 113 aa14.22□□□□□ -0.13
COL13A1-202ENST00000357811 C9orf129Q5T035 196 aaKnown RBP14.22□□□□□ -0.13
COL13A1-202ENST00000357811 KLK5Q9Y337 293 aaPredicted RBP14.22□□□□□ -0.13
COL13A1-202ENST00000357811 C22orf24Q9Y442 160 aa14.22□□□□□ -0.13
COL13A1-202ENST00000357811 SLPIP03973 132 aa14.22□□□□□ -0.13
COL13A1-202ENST00000357811 SMCR5Q8TEV8 140 aa14.22□□□□□ -0.13
COL13A1-202ENST00000357811 A0A087WZ39 114 aa14.21□□□□□ -0.14
COL13A1-202ENST00000357811 HILS1P60008 231 aa14.21□□□□□ -0.14
COL13A1-202ENST00000357811 DEFB135Q30KP9 77 aa14.21□□□□□ -0.14
COL13A1-202ENST00000357811 GAGE2AQ6NT46 116 aa14.2□□□□□ -0.14
COL13A1-202ENST00000357811 FAM222AQ5U5X8 452 aa14.2□□□□□ -0.14
COL13A1-202ENST00000357811 NSD1Q96L73 2696 aaPredicted RBP14.19□□□□□ -0.14
COL13A1-202ENST00000357811 TRACP01848 142 aa14.19□□□□□ -0.14
COL13A1-202ENST00000357811 DEFB121Q5J5C9 76 aa14.19□□□□□ -0.14
COL13A1-202ENST00000357811 DNAL4O96015 105 aa14.18□□□□□ -0.14
COL13A1-202ENST00000357811 RPL28P46779 137 aaKnown RBP14.17□□□□□ -0.14
COL13A1-202ENST00000357811 LINC00269Q8N2A0 174 aa14.17□□□□□ -0.14
COL13A1-202ENST00000357811 TRBV7-7A0A0K0K1E9 115 aa14.17□□□□□ -0.14
COL13A1-202ENST00000357811 LECT2O14960 151 aa14.17□□□□□ -0.14
COL13A1-202ENST00000357811 X6R8D5 127 aa14.17□□□□□ -0.14
COL13A1-202ENST00000357811 HTN3P15516 51 aa14.16□□□□□ -0.14
COL13A1-202ENST00000357811 C9orf116Q5BN46 136 aaPredicted RBP14.16□□□□□ -0.14
COL13A1-202ENST00000357811 MALP21145 153 aa14.16□□□□□ -0.14
COL13A1-202ENST00000357811 HIVEP1P15822 2718 aa14.16□□□□□ -0.14
COL13A1-202ENST00000357811 FAM240AA0A1B0GVK7 77 aa14.15□□□□□ -0.14
COL13A1-202ENST00000357811 C14orf132Q9NPU4 83 aa14.15□□□□□ -0.14
COL13A1-202ENST00000357811 IBA57-AS1B1ANH7 110 aa14.14□□□□□ -0.15
COL13A1-202ENST00000357811 SS18Q15532 418 aa14.14□□□□□ -0.15
COL13A1-202ENST00000357811 LINC00526Q96FQ7 95 aa14.14□□□□□ -0.15
COL13A1-202ENST00000357811 C3orf22Q8N5N4 141 aa14.14□□□□□ -0.15
COL13A1-202ENST00000357811 PRO0255Q9UI72 69 aa14.13□□□□□ -0.15
COL13A1-202ENST00000357811 ANGP03950 147 aaKnown RBP14.12□□□□□ -0.15
COL13A1-202ENST00000357811 PKD1L1Q8TDX9 2849 aa14.12□□□□□ -0.15
COL13A1-202ENST00000357811 KIR2DL5BQ8NHK3 375 aa14.11□□□□□ -0.15
COL13A1-202ENST00000357811 NCR3O14931 201 aa14.1□□□□□ -0.15
COL13A1-202ENST00000357811 UQCRQO14949 82 aa14.08□□□□□ -0.16
COL13A1-202ENST00000357811 LY6G6DO95868 133 aa14.07□□□□□ -0.16
COL13A1-202ENST00000357811 FAM19A5Q7Z5A7 132 aaPredicted RBP14.07□□□□□ -0.16
COL13A1-202ENST00000357811 CELA1Q9UNI1 258 aa14.07□□□□□ -0.16
COL13A1-202ENST00000357811 CHCHD10Q8WYQ3 142 aaPredicted RBP14.06□□□□□ -0.16
COL13A1-202ENST00000357811 INAFM1C9JVW0 142 aa14.05□□□□□ -0.16
COL13A1-202ENST00000357811 J3QKU1 62 aa14.05□□□□□ -0.16
COL13A1-202ENST00000357811 IGHV4-28A0A0C4DH34 117 aa14.05□□□□□ -0.16
COL13A1-202ENST00000357811 LINC00643Q86TS7 51 aa14.05□□□□□ -0.16
COL13A1-202ENST00000357811 IMUPQ9GZP8 106 aa14.05□□□□□ -0.16
COL13A1-202ENST00000357811 LINC00612Q8N6U2 182 aa14.04□□□□□ -0.16
COL13A1-202ENST00000357811 ACYP1P07311 99 aa14.04□□□□□ -0.16
COL13A1-202ENST00000357811 DAD1P61803 113 aa14.04□□□□□ -0.16
COL13A1-202ENST00000357811 C5orf47Q569G3 176 aa14.04□□□□□ -0.16
COL13A1-202ENST00000357811 C6orf223Q8N319 242 aa14.04□□□□□ -0.16
COL13A1-202ENST00000357811 A0A1B0GUV1 79 aa14.03□□□□□ -0.16
COL13A1-202ENST00000357811 INAFM2P0DMQ5 153 aa14.03□□□□□ -0.16
COL13A1-202ENST00000357811 REG3AQ06141 175 aa14.03□□□□□ -0.16
COL13A1-202ENST00000357811 J3KT08 172 aa14.03□□□□□ -0.16
COL13A1-202ENST00000357811 Q8IZM0 81 aa14.02□□□□□ -0.16
COL13A1-202ENST00000357811 hADV29S1A0JD25 119 aa14.02□□□□□ -0.17
COL13A1-202ENST00000357811 SMIM9A6NGZ8 99 aa14.02□□□□□ -0.17
COL13A1-202ENST00000357811 SDIM1Q6ZPB5 146 aa14.02□□□□□ -0.17
COL13A1-202ENST00000357811 IGKV3D-7A0A0C4DH55 119 aa14.01□□□□□ -0.17
COL13A1-202ENST00000357811 H0YGX0 51 aa14.01□□□□□ -0.17
COL13A1-202ENST00000357811 Q8NDZ9 215 aa14.01□□□□□ -0.17
COL13A1-202ENST00000357811 KIAA0087Q14695 138 aa13.99□□□□□ -0.17
COL13A1-202ENST00000357811 C10orf25Q5T742 122 aa13.99□□□□□ -0.17
COL13A1-202ENST00000357811 COX7CP15954 63 aa13.98□□□□□ -0.17
COL13A1-202ENST00000357811 CD164L2Q6UWJ8 174 aa13.98□□□□□ -0.17
COL13A1-202ENST00000357811 NANOS2P60321 138 aaKnown RBP13.98□□□□□ -0.17
COL13A1-202ENST00000357811 UNQ6190/PRO20217Q6UXQ8 127 aa13.97□□□□□ -0.17
COL13A1-202ENST00000357811 LINC00846Q9NV44 126 aa13.97□□□□□ -0.17
COL13A1-202ENST00000357811 KLK12Q9UKR0 248 aa13.97□□□□□ -0.17
COL13A1-202ENST00000357811 KMT2BQ9UMN6 2715 aaPredicted RBP13.95□□□□□ -0.18
COL13A1-202ENST00000357811 CYSTM1Q9H1C7 97 aa13.95□□□□□ -0.18
COL13A1-202ENST00000357811 C9orf66Q5T8R8 295 aa13.95□□□□□ -0.18
COL13A1-202ENST00000357811 FLNBO75369 2602 aaKnown RBP13.95□□□□□ -0.18
COL13A1-202ENST00000357811 LYRM9A8MSI8 78 aa13.95□□□□□ -0.18
COL13A1-202ENST00000357811 ORMDL1Q9P0S3 153 aa13.95□□□□□ -0.18
COL13A1-202ENST00000357811 CXCL5P42830 114 aa13.94□□□□□ -0.18
COL13A1-202ENST00000357811 C6orf99Q4VX62 202 aa13.94□□□□□ -0.18
COL13A1-202ENST00000357811 STAB1Q9NY15 2570 aa13.93□□□□□ -0.18
COL13A1-202ENST00000357811 A0A087WVE0 104 aa13.93□□□□□ -0.18
COL13A1-202ENST00000357811 TENM3Q9P273 2699 aa13.91□□□□□ -0.18
COL13A1-202ENST00000357811 S100A7L2Q5SY68 101 aa13.91□□□□□ -0.18
COL13A1-202ENST00000357811 NOTCH1P46531 2555 aa13.91□□□□□ -0.18
COL13A1-202ENST00000357811 SPAG11BQ08648 103 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms