RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 NOTCH3Q9UM47 2321 aa16.4■□□□□ 0.22
NPAS3-203ENST00000357798 FLNCQ14315 2725 aa16.39■□□□□ 0.21
NPAS3-203ENST00000357798 CACNA1AO00555 2505 aa16.39■□□□□ 0.21
NPAS3-203ENST00000357798 CFAP46Q8IYW2 2715 aa16.39■□□□□ 0.21
NPAS3-203ENST00000357798 MYO9AB2RTY4 2548 aa16.38■□□□□ 0.21
NPAS3-203ENST00000357798 CHD6Q8TD26 2715 aa16.38■□□□□ 0.21
NPAS3-203ENST00000357798 KIR2DL5BQ8NHK3 375 aa16.37■□□□□ 0.21
NPAS3-203ENST00000357798 COX17Q14061 63 aa16.36■□□□□ 0.21
NPAS3-203ENST00000357798 WNK1Q9H4A3 2382 aa16.36■□□□□ 0.21
NPAS3-203ENST00000357798 TRBV10-3A0A0K0K1G6 114 aa16.36■□□□□ 0.21
NPAS3-203ENST00000357798 DNAJC9-AS1A6NH13 148 aa16.35■□□□□ 0.21
NPAS3-203ENST00000357798 HILS1P60008 231 aa16.35■□□□□ 0.21
NPAS3-203ENST00000357798 PKD1L2Q7Z442 2459 aa16.34■□□□□ 0.21
NPAS3-203ENST00000357798 GHRHP01286 108 aa16.34■□□□□ 0.21
NPAS3-203ENST00000357798 PRR3P79522 188 aaKnown RBP16.34■□□□□ 0.21
NPAS3-203ENST00000357798 IGLV1-51P01701 117 aa16.34■□□□□ 0.21
NPAS3-203ENST00000357798 DEFB113Q30KQ7 82 aa16.33■□□□□ 0.21
NPAS3-203ENST00000357798 UTP20O75691 2785 aaKnown RBP16.33■□□□□ 0.2
NPAS3-203ENST00000357798 CSMD2Q7Z408 3487 aa16.33■□□□□ 0.2
NPAS3-203ENST00000357798 AKAP9Q99996 3911 aa16.33■□□□□ 0.2
NPAS3-203ENST00000357798 FBN2P35556 2912 aa16.33■□□□□ 0.2
NPAS3-203ENST00000357798 GYPEP15421 78 aa16.32■□□□□ 0.2
NPAS3-203ENST00000357798 UBL5Q9BZL1 73 aa16.32■□□□□ 0.2
NPAS3-203ENST00000357798 KIAA0087Q14695 138 aa16.32■□□□□ 0.2
NPAS3-203ENST00000357798 LINC00612Q8N6U2 182 aa16.32■□□□□ 0.2
NPAS3-203ENST00000357798 NDUFC2-KCTD14E9PQ53 114 aa16.31■□□□□ 0.2
NPAS3-203ENST00000357798 ENHOQ6UWT2 76 aa16.3■□□□□ 0.2
NPAS3-203ENST00000357798 FAM19A1Q7Z5A9 133 aa16.3■□□□□ 0.2
NPAS3-203ENST00000357798 DSCR8Q96T75 97 aa16.3■□□□□ 0.2
NPAS3-203ENST00000357798 DEFB130BP0DP73 79 aa16.29■□□□□ 0.2
NPAS3-203ENST00000357798 DEFB130AP0DP74 79 aa16.29■□□□□ 0.2
NPAS3-203ENST00000357798 CLPSL2Q6UWE3 100 aa16.29■□□□□ 0.2
NPAS3-203ENST00000357798 WFDC9Q8NEX5 89 aa16.29■□□□□ 0.2
NPAS3-203ENST00000357798 KRTAP10-9P60411 292 aa16.29■□□□□ 0.2
NPAS3-203ENST00000357798 POLQO75417 2590 aa16.29■□□□□ 0.2
NPAS3-203ENST00000357798 TEX15Q9BXT5 2789 aa16.29■□□□□ 0.2
NPAS3-203ENST00000357798 TRAV23DV6A0A075B6W5 121 aa16.28■□□□□ 0.2
NPAS3-203ENST00000357798 IGHV4-28A0A0C4DH34 117 aa16.28■□□□□ 0.2
NPAS3-203ENST00000357798 OXTP01178 125 aa16.27■□□□□ 0.2
NPAS3-203ENST00000357798 C6orf99Q4VX62 202 aa16.27■□□□□ 0.2
NPAS3-203ENST00000357798 CD164L2Q6UWJ8 174 aa16.27■□□□□ 0.2
NPAS3-203ENST00000357798 LINC00575Q6W349 94 aa16.26■□□□□ 0.19
NPAS3-203ENST00000357798 Q6ZQT0 140 aa16.24■□□□□ 0.19
NPAS3-203ENST00000357798 ESM1Q9NQ30 184 aa16.24■□□□□ 0.19
NPAS3-203ENST00000357798 SETXQ7Z333 2677 aaKnown RBP16.24■□□□□ 0.19
NPAS3-203ENST00000357798 LOC110117498A0A087WWA1 95 aa16.24■□□□□ 0.19
NPAS3-203ENST00000357798 BCE1O60756 84 aa16.23■□□□□ 0.19
NPAS3-203ENST00000357798 ZNF561-AS1K7EIQ3 104 aa16.23■□□□□ 0.19
NPAS3-203ENST00000357798 PRO0255Q9UI72 69 aa16.22■□□□□ 0.19
NPAS3-203ENST00000357798 RBM3P98179 157 aaKnown RBP16.22■□□□□ 0.19
NPAS3-203ENST00000357798 TLN2Q9Y4G6 2542 aa16.22■□□□□ 0.19
NPAS3-203ENST00000357798 KRTAP1-3Q8IUG1 177 aa16.21■□□□□ 0.19
NPAS3-203ENST00000357798 CHCHD10Q8WYQ3 142 aaPredicted RBP16.21■□□□□ 0.19
NPAS3-203ENST00000357798 RNASE1P07998 156 aaKnown RBP16.21■□□□□ 0.18
NPAS3-203ENST00000357798 LINC00269Q8N2A0 174 aa16.21■□□□□ 0.18
NPAS3-203ENST00000357798 C6orf223Q8N319 242 aa16.21■□□□□ 0.18
NPAS3-203ENST00000357798 Q8NDZ9 215 aa16.21■□□□□ 0.18
NPAS3-203ENST00000357798 USP24Q9UPU5 2620 aa16.2■□□□□ 0.18
NPAS3-203ENST00000357798 C9orf116Q5BN46 136 aaPredicted RBP16.19■□□□□ 0.18
NPAS3-203ENST00000357798 LINC01006Q8NI28 216 aa16.19■□□□□ 0.18
NPAS3-203ENST00000357798 MUC7Q8TAX7 377 aa16.19■□□□□ 0.18
NPAS3-203ENST00000357798 JMJD1CQ15652 2540 aa16.18■□□□□ 0.18
NPAS3-203ENST00000357798 BBC3Q96PG8 261 aaPredicted RBP16.18■□□□□ 0.18
NPAS3-203ENST00000357798 C16orf95Q9H693 158 aa16.18■□□□□ 0.18
NPAS3-203ENST00000357798 IGSF10Q6WRI0 2623 aa16.17■□□□□ 0.18
NPAS3-203ENST00000357798 A0A096LPF7 62 aa16.16■□□□□ 0.18
NPAS3-203ENST00000357798 C20orf197Q8N268 126 aa16.16■□□□□ 0.18
NPAS3-203ENST00000357798 MYO18BQ8IUG5 2567 aa16.15■□□□□ 0.18
NPAS3-203ENST00000357798 TRAV7A0A075B6U4 112 aa16.15■□□□□ 0.18
NPAS3-203ENST00000357798 LAMTOR3Q9UHA4 124 aa16.15■□□□□ 0.18
NPAS3-203ENST00000357798 H3BQ85 93 aa16.14■□□□□ 0.17
NPAS3-203ENST00000357798 REG3AQ06141 175 aa16.14■□□□□ 0.17
NPAS3-203ENST00000357798 NBPF19A0A087WUL8 3843 aa16.14■□□□□ 0.17
NPAS3-203ENST00000357798 IGLV10-54A0A075B6I4 117 aa16.13■□□□□ 0.17
NPAS3-203ENST00000357798 Q5XG85 94 aa16.13■□□□□ 0.17
NPAS3-203ENST00000357798 X6R8D5 127 aa16.13■□□□□ 0.17
NPAS3-203ENST00000357798 ANGP03950 147 aaKnown RBP16.12■□□□□ 0.17
NPAS3-203ENST00000357798 LINC01547P58512 204 aaPredicted RBP16.12■□□□□ 0.17
NPAS3-203ENST00000357798 LINC00482Q8N8I6 264 aa16.12■□□□□ 0.17
NPAS3-203ENST00000357798 NAV2Q8IVL1 2488 aa16.12■□□□□ 0.17
NPAS3-203ENST00000357798 PDE6GP18545 87 aa16.12■□□□□ 0.17
NPAS3-203ENST00000357798 WIPF1O43516 503 aa16.11■□□□□ 0.17
NPAS3-203ENST00000357798 FAM236DA0A1B0GTK5 79 aa16.11■□□□□ 0.17
NPAS3-203ENST00000357798 IGLV6-57P01721 117 aa16.11■□□□□ 0.17
NPAS3-203ENST00000357798 FAM236CP0DP71 79 aa16.11■□□□□ 0.17
NPAS3-203ENST00000357798 PTPN13Q12923 2485 aa16.1■□□□□ 0.17
NPAS3-203ENST00000357798 LRRK2Q5S007 2527 aa16.1■□□□□ 0.17
NPAS3-203ENST00000357798 C9orf66Q5T8R8 295 aa16.1■□□□□ 0.17
NPAS3-203ENST00000357798 Q6ZVQ6 151 aa16.1■□□□□ 0.17
NPAS3-203ENST00000357798 M0R2N4 97 aa16.09■□□□□ 0.17
NPAS3-203ENST00000357798 FAM208BQ5VWN6 2430 aa16.08■□□□□ 0.16
NPAS3-203ENST00000357798 SPAG11BQ08648 103 aa16.07■□□□□ 0.16
NPAS3-203ENST00000357798 C4orf26Q17RF5 130 aa16.07■□□□□ 0.16
NPAS3-203ENST00000357798 Q8N3U1 123 aa16.07■□□□□ 0.16
NPAS3-203ENST00000357798 A0A0J9YWU9 116 aa16.07■□□□□ 0.16
NPAS3-203ENST00000357798 LYRM9A8MSI8 78 aa16.07■□□□□ 0.16
NPAS3-203ENST00000357798 IGHV4-30-4P0DP06 118 aa16.07■□□□□ 0.16
NPAS3-203ENST00000357798 CXCL6P80162 114 aa16.07■□□□□ 0.16
NPAS3-203ENST00000357798 C10orf25Q5T742 122 aa16.07■□□□□ 0.16
NPAS3-203ENST00000357798 UNQ6190/PRO20217Q6UXQ8 127 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms