RNA–Protein interactions for RNA: ENST00000357517.6

PCDH1-202, Transcript of protocadherin 1, humanhuman

TSL 2

Gene PCDH1, Length 3,307 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-202ENST00000357517 TLN2Q9Y4G6 2542 aa7.36□□□□□ -1.23
PCDH1-202ENST00000357517 C5orf56Q8N8D9 126 aa7.35□□□□□ -1.23
PCDH1-202ENST00000357517 HIGD2AQ9BW72 106 aa7.35□□□□□ -1.23
PCDH1-202ENST00000357517 GNLYP22749 145 aa7.35□□□□□ -1.23
PCDH1-202ENST00000357517 NDUFC1O43677 76 aa7.34□□□□□ -1.23
PCDH1-202ENST00000357517 SPATA3Q8NHX4 192 aa7.34□□□□□ -1.23
PCDH1-202ENST00000357517 TRGV1A0A0A0MS02 117 aa7.34□□□□□ -1.23
PCDH1-202ENST00000357517 C6orf99Q4VX62 202 aa7.34□□□□□ -1.23
PCDH1-202ENST00000357517 PLA2G2CQ5R387 149 aa7.34□□□□□ -1.23
PCDH1-202ENST00000357517 OTOGLQ3ZCN5 2332 aa7.34□□□□□ -1.23
PCDH1-202ENST00000357517 BPY2O14599 106 aa7.34□□□□□ -1.24
PCDH1-202ENST00000357517 CLPSL2Q6UWE3 100 aa7.34□□□□□ -1.24
PCDH1-202ENST00000357517 C10orf99Q6UWK7 81 aa7.34□□□□□ -1.24
PCDH1-202ENST00000357517 SPTSSBQ8NFR3 76 aa7.34□□□□□ -1.24
PCDH1-202ENST00000357517 MINOS1-NBL1R4GNA1 71 aa7.34□□□□□ -1.24
PCDH1-202ENST00000357517 CEP295Q9C0D2 2601 aa7.33□□□□□ -1.24
PCDH1-202ENST00000357517 DEFB131AP59861 70 aa7.33□□□□□ -1.24
PCDH1-202ENST00000357517 UBE2E2Q96LR5 201 aa7.33□□□□□ -1.24
PCDH1-202ENST00000357517 CELA1Q9UNI1 258 aa7.33□□□□□ -1.24
PCDH1-202ENST00000357517 HRNRQ86YZ3 2850 aaPredicted RBP7.32□□□□□ -1.24
PCDH1-202ENST00000357517 ATP5EP56381 51 aaPredicted RBP7.32□□□□□ -1.24
PCDH1-202ENST00000357517 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.32□□□□□ -1.24
PCDH1-202ENST00000357517 NTM-AS1Q6ZSK4 140 aa7.32□□□□□ -1.24
PCDH1-202ENST00000357517 CDC42SE2Q9NRR3 84 aa7.32□□□□□ -1.24
PCDH1-202ENST00000357517 TRBV7-4A0A0J9YYF1 115 aa7.31□□□□□ -1.24
PCDH1-202ENST00000357517 TRBV10-3A0A0K0K1G6 114 aa7.31□□□□□ -1.24
PCDH1-202ENST00000357517 TRBV6-4A0A1B0GX49 114 aa7.31□□□□□ -1.24
PCDH1-202ENST00000357517 SPTBN4Q9H254 2564 aa7.31□□□□□ -1.24
PCDH1-202ENST00000357517 PRYO14603 147 aa7.3□□□□□ -1.24
PCDH1-202ENST00000357517 APOC4P55056 127 aa7.3□□□□□ -1.24
PCDH1-202ENST00000357517 A0A096LNT2 108 aa7.3□□□□□ -1.24
PCDH1-202ENST00000357517 H3BS24 57 aa7.3□□□□□ -1.24
PCDH1-202ENST00000357517 Q6ZQT0 140 aa7.3□□□□□ -1.24
PCDH1-202ENST00000357517 C1orf158Q8N1D5 194 aa7.3□□□□□ -1.24
PCDH1-202ENST00000357517 ZFYVE26Q68DK2 2539 aa7.29□□□□□ -1.24
PCDH1-202ENST00000357517 LINC01356Q8N9X3 169 aa7.29□□□□□ -1.24
PCDH1-202ENST00000357517 LOC100131303A0A0U1RQF7 123 aa7.29□□□□□ -1.24
PCDH1-202ENST00000357517 C9orf116Q5BN46 136 aaPredicted RBP7.29□□□□□ -1.24
PCDH1-202ENST00000357517 NBEAL2Q6ZNJ1 2754 aa7.29□□□□□ -1.24
PCDH1-202ENST00000357517 H3BUX3 64 aa7.28□□□□□ -1.24
PCDH1-202ENST00000357517 IGFL3Q6UXB1 125 aa7.28□□□□□ -1.24
PCDH1-202ENST00000357517 LINC01006Q8NI28 216 aa7.28□□□□□ -1.24
PCDH1-202ENST00000357517 Q6ZQY7 126 aa7.28□□□□□ -1.24
PCDH1-202ENST00000357517 FAM30AQ9NZY2 134 aa7.28□□□□□ -1.24
PCDH1-202ENST00000357517 DYNLRB2Q8TF09 96 aa7.27□□□□□ -1.25
PCDH1-202ENST00000357517 USP9YO00507 2555 aaPredicted RBP7.27□□□□□ -1.25
PCDH1-202ENST00000357517 BSNQ9UPA5 3926 aa7.27□□□□□ -1.25
PCDH1-202ENST00000357517 IGLV4-60A0A075B6I1 120 aa7.27□□□□□ -1.25
PCDH1-202ENST00000357517 K7EQD1 137 aa7.26□□□□□ -1.25
PCDH1-202ENST00000357517 Q6ZRP5 223 aa7.26□□□□□ -1.25
PCDH1-202ENST00000357517 ZNF292O60281 2723 aa7.26□□□□□ -1.25
PCDH1-202ENST00000357517 A8MUN3 132 aa7.26□□□□□ -1.25
PCDH1-202ENST00000357517 IBA57-AS1B1ANH7 110 aa7.26□□□□□ -1.25
PCDH1-202ENST00000357517 USMG5Q96IX5 58 aa7.26□□□□□ -1.25
PCDH1-202ENST00000357517 IGHV4-28A0A0C4DH34 117 aa7.26□□□□□ -1.25
PCDH1-202ENST00000357517 NCOR2Q9Y618 2525 aa7.25□□□□□ -1.25
PCDH1-202ENST00000357517 PIEZO1Q92508 2521 aa7.24□□□□□ -1.25
PCDH1-202ENST00000357517 CHD8Q9HCK8 2581 aa7.24□□□□□ -1.25
PCDH1-202ENST00000357517 C3orf84H3BNL1 204 aa7.24□□□□□ -1.25
PCDH1-202ENST00000357517 DEFB136Q30KP8 78 aa7.24□□□□□ -1.25
PCDH1-202ENST00000357517 CD164L2Q6UWJ8 174 aa7.24□□□□□ -1.25
PCDH1-202ENST00000357517 Q6ZTC4 211 aa7.24□□□□□ -1.25
PCDH1-202ENST00000357517 KTN1-AS1Q86SY8 53 aa7.24□□□□□ -1.25
PCDH1-202ENST00000357517 C1orf64Q8NEQ6 169 aa7.24□□□□□ -1.25
PCDH1-202ENST00000357517 FAM19A3Q7Z5A8 133 aa7.23□□□□□ -1.25
PCDH1-202ENST00000357517 USP9XQ93008 2570 aaPredicted RBP7.22□□□□□ -1.25
PCDH1-202ENST00000357517 IGLV10-54A0A075B6I4 117 aa7.22□□□□□ -1.25
PCDH1-202ENST00000357517 TRAV22A0A0B4J277 110 aa7.22□□□□□ -1.25
PCDH1-202ENST00000357517 IGF2RP11717 2491 aa7.22□□□□□ -1.25
PCDH1-202ENST00000357517 BCE1O60756 84 aa7.22□□□□□ -1.25
PCDH1-202ENST00000357517 MUC7Q8TAX7 377 aa7.22□□□□□ -1.25
PCDH1-202ENST00000357517 F8P00451 2351 aa7.21□□□□□ -1.25
PCDH1-202ENST00000357517 TRGV2A0A075B6R0 118 aa7.21□□□□□ -1.25
PCDH1-202ENST00000357517 A0A096LPF7 62 aa7.21□□□□□ -1.25
PCDH1-202ENST00000357517 LINC00269Q8N2A0 174 aa7.21□□□□□ -1.26
PCDH1-202ENST00000357517 IGHV4-38-2P0DP08 117 aa7.21□□□□□ -1.26
PCDH1-202ENST00000357517 CXCL6P80162 114 aa7.21□□□□□ -1.26
PCDH1-202ENST00000357517 APCP25054 2843 aa7.2□□□□□ -1.26
PCDH1-202ENST00000357517 NIPBLQ6KC79 2804 aaeCLIP7.2□□□□□ -1.26
PCDH1-202ENST00000357517 PLA2G2AP14555 144 aa7.2□□□□□ -1.26
PCDH1-202ENST00000357517 C10orf25Q5T742 122 aa7.2□□□□□ -1.26
PCDH1-202ENST00000357517 Q8NA96 180 aa7.2□□□□□ -1.26
PCDH1-202ENST00000357517 NOP10Q9NPE3 64 aaKnown RBP7.2□□□□□ -1.26
PCDH1-202ENST00000357517 M0R378 163 aa7.2□□□□□ -1.26
PCDH1-202ENST00000357517 LINC00575Q6W349 94 aa7.2□□□□□ -1.26
PCDH1-202ENST00000357517 CHD6Q8TD26 2715 aa7.2□□□□□ -1.26
PCDH1-202ENST00000357517 IGHV3OR16-9A0A0B4J2B5 98 aa7.19□□□□□ -1.26
PCDH1-202ENST00000357517 CHKB-CPT1BH3BT56 60 aa7.19□□□□□ -1.26
PCDH1-202ENST00000357517 hDV103S1A0JD37 113 aa7.19□□□□□ -1.26
PCDH1-202ENST00000357517 KLK12Q9UKR0 248 aa7.19□□□□□ -1.26
PCDH1-202ENST00000357517 LY6G6DO95868 133 aa7.18□□□□□ -1.26
PCDH1-202ENST00000357517 Q8NDZ9 215 aa7.18□□□□□ -1.26
PCDH1-202ENST00000357517 FBN2P35556 2912 aa7.17□□□□□ -1.26
PCDH1-202ENST00000357517 K7EMT4 169 aa7.17□□□□□ -1.26
PCDH1-202ENST00000357517 SMIM29Q86T20 159 aa7.17□□□□□ -1.26
PCDH1-202ENST00000357517 INSP01308 110 aa7.17□□□□□ -1.26
PCDH1-202ENST00000357517 SLURP1P55000 103 aa7.17□□□□□ -1.26
PCDH1-202ENST00000357517 LINC00167Q96N53 147 aa7.17□□□□□ -1.26
PCDH1-202ENST00000357517 CELSR2Q9HCU4 2923 aa7.16□□□□□ -1.26
PCDH1-202ENST00000357517 TRGV4A0A0C4DH28 118 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms