RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 DEFB130AP0DP74 79 aa4.68□□□□□ -1.66
TRIM38-201ENST00000357085 EDN2P20800 178 aa4.68□□□□□ -1.66
TRIM38-201ENST00000357085 C6orf99Q4VX62 202 aa4.68□□□□□ -1.66
TRIM38-201ENST00000357085 IGHV4-28A0A0C4DH34 117 aa4.68□□□□□ -1.66
TRIM38-201ENST00000357085 IGHV4-38-2P0DP08 117 aa4.68□□□□□ -1.66
TRIM38-201ENST00000357085 Q6ZVQ6 151 aa4.68□□□□□ -1.66
TRIM38-201ENST00000357085 COX6A2Q02221 97 aa4.68□□□□□ -1.66
TRIM38-201ENST00000357085 CASC2Q6XLA1 102 aa4.68□□□□□ -1.66
TRIM38-201ENST00000357085 Q6ZQY7 126 aa4.68□□□□□ -1.66
TRIM38-201ENST00000357085 HCG22E2RYF7 251 aa4.68□□□□□ -1.66
TRIM38-201ENST00000357085 ZNF292O60281 2723 aa4.68□□□□□ -1.66
TRIM38-201ENST00000357085 C11orf72Q8NBR9 251 aa4.68□□□□□ -1.66
TRIM38-201ENST00000357085 A0A0C4DFX4 3053 aa4.67□□□□□ -1.66
TRIM38-201ENST00000357085 C6orf223Q8N319 242 aa4.67□□□□□ -1.66
TRIM38-201ENST00000357085 CENPEQ02224 2701 aa4.67□□□□□ -1.66
TRIM38-201ENST00000357085 LYPD5Q6UWN5 251 aa4.67□□□□□ -1.66
TRIM38-201ENST00000357085 FAM30AQ9NZY2 134 aa4.67□□□□□ -1.66
TRIM38-201ENST00000357085 IGHV3OR16-9A0A0B4J2B5 98 aa4.67□□□□□ -1.66
TRIM38-201ENST00000357085 PROK1P58294 105 aa4.67□□□□□ -1.66
TRIM38-201ENST00000357085 DNAH12Q6ZR08 3092 aa4.67□□□□□ -1.66
TRIM38-201ENST00000357085 GCN1Q92616 2671 aaKnown RBP4.66□□□□□ -1.66
TRIM38-201ENST00000357085 C22orf34Q6ZV56 151 aa4.66□□□□□ -1.66
TRIM38-201ENST00000357085 CHKB-CPT1BH3BT56 60 aa4.66□□□□□ -1.66
TRIM38-201ENST00000357085 C14orf177Q52M58 125 aa4.66□□□□□ -1.66
TRIM38-201ENST00000357085 LINC00959A0A1B0GUT2 108 aa4.66□□□□□ -1.66
TRIM38-201ENST00000357085 PSPHP1O15172 72 aa4.66□□□□□ -1.66
TRIM38-201ENST00000357085 TP53AIP1Q9HCN2 124 aa4.66□□□□□ -1.66
TRIM38-201ENST00000357085 GVQW2A0A096LPI5 108 aaPredicted RBP4.65□□□□□ -1.66
TRIM38-201ENST00000357085 A6NED7 52 aa4.65□□□□□ -1.67
TRIM38-201ENST00000357085 Q1T7F1 81 aa4.65□□□□□ -1.67
TRIM38-201ENST00000357085 SPART-AS1P0CW21 52 aa4.65□□□□□ -1.67
TRIM38-201ENST00000357085 Q6ZTI0 123 aa4.64□□□□□ -1.67
TRIM38-201ENST00000357085 CLPSL2Q6UWE3 100 aa4.64□□□□□ -1.67
TRIM38-201ENST00000357085 SPATA3Q8NHX4 192 aa4.64□□□□□ -1.67
TRIM38-201ENST00000357085 IGHV4-31P0DP07 118 aa4.64□□□□□ -1.67
TRIM38-201ENST00000357085 SPANXA2-OT1Q8N9U9 137 aa4.64□□□□□ -1.67
TRIM38-201ENST00000357085 PRB2P02812 416 aaPredicted RBP4.64□□□□□ -1.67
TRIM38-201ENST00000357085 Q6YL49 198 aa4.63□□□□□ -1.67
TRIM38-201ENST00000357085 SLURP1P55000 103 aa4.63□□□□□ -1.67
TRIM38-201ENST00000357085 LELP1Q5T871 98 aa4.63□□□□□ -1.67
TRIM38-201ENST00000357085 ATP11AUNQ6ZP68 121 aa4.63□□□□□ -1.67
TRIM38-201ENST00000357085 HIGD2AQ9BW72 106 aa4.63□□□□□ -1.67
TRIM38-201ENST00000357085 ZNF575Q86XF7 245 aa4.63□□□□□ -1.67
TRIM38-201ENST00000357085 Q8NA96 180 aa4.63□□□□□ -1.67
TRIM38-201ENST00000357085 CYSTM1Q9H1C7 97 aa4.63□□□□□ -1.67
TRIM38-201ENST00000357085 IGLV6-57P01721 117 aa4.62□□□□□ -1.67
TRIM38-201ENST00000357085 LINC00474Q9P2X8 69 aa4.62□□□□□ -1.67
TRIM38-201ENST00000357085 FLNAP21333 2647 aaKnown RBP4.62□□□□□ -1.67
TRIM38-201ENST00000357085 TRAV10A0A0B4J240 114 aa4.62□□□□□ -1.67
TRIM38-201ENST00000357085 ADORA2A-AS1P86434 159 aa4.62□□□□□ -1.67
TRIM38-201ENST00000357085 DEFB112Q30KQ8 113 aa4.62□□□□□ -1.67
TRIM38-201ENST00000357085 ZNF843Q8N446 348 aa4.62□□□□□ -1.67
TRIM38-201ENST00000357085 LINC00208Q96KT6 92 aa4.62□□□□□ -1.67
TRIM38-201ENST00000357085 IGHV4-61A0A0C4DH41 118 aa4.62□□□□□ -1.67
TRIM38-201ENST00000357085 TRBV7-4A0A0J9YYF1 115 aa4.62□□□□□ -1.67
TRIM38-201ENST00000357085 POLQO75417 2590 aa4.62□□□□□ -1.67
TRIM38-201ENST00000357085 TM2D3Q9BRN9 247 aa4.62□□□□□ -1.67
TRIM38-201ENST00000357085 OXTP01178 125 aa4.61□□□□□ -1.67
TRIM38-201ENST00000357085 IGKV2-28A0A075B6P5 120 aa4.61□□□□□ -1.67
TRIM38-201ENST00000357085 IGKV2D-28P01615 120 aa4.61□□□□□ -1.67
TRIM38-201ENST00000357085 KPRPQ5T749 579 aaPredicted RBP4.61□□□□□ -1.67
TRIM38-201ENST00000357085 LINC00269Q8N2A0 174 aa4.61□□□□□ -1.67
TRIM38-201ENST00000357085 F8P00451 2351 aa4.6□□□□□ -1.67
TRIM38-201ENST00000357085 LRCOL1A6NCL2 159 aa4.6□□□□□ -1.67
TRIM38-201ENST00000357085 IL17DQ8TAD2 202 aa4.6□□□□□ -1.67
TRIM38-201ENST00000357085 CENPFP49454 3210 aa4.6□□□□□ -1.67
TRIM38-201ENST00000357085 ZNF706Q9Y5V0 76 aaPredicted RBP4.6□□□□□ -1.67
TRIM38-201ENST00000357085 C3orf84H3BNL1 204 aa4.6□□□□□ -1.67
TRIM38-201ENST00000357085 IGLV10-54A0A075B6I4 117 aa4.59□□□□□ -1.67
TRIM38-201ENST00000357085 KTN1-AS1Q86SY8 53 aa4.59□□□□□ -1.67
TRIM38-201ENST00000357085 A0A0J9YWU9 116 aa4.59□□□□□ -1.67
TRIM38-201ENST00000357085 IGHV4-30-4P0DP06 118 aa4.59□□□□□ -1.67
TRIM38-201ENST00000357085 Q6ZSN1 163 aa4.59□□□□□ -1.67
TRIM38-201ENST00000357085 B9D2Q9BPU9 175 aa4.59□□□□□ -1.67
TRIM38-201ENST00000357085 Q6ZRU5 148 aa4.59□□□□□ -1.67
TRIM38-201ENST00000357085 DEFB105AQ8NG35 78 aa4.59□□□□□ -1.68
TRIM38-201ENST00000357085 WFDC10AQ9H1F0 79 aa4.59□□□□□ -1.68
TRIM38-201ENST00000357085 CDSNQ15517 529 aa4.58□□□□□ -1.68
TRIM38-201ENST00000357085 C10orf25Q5T742 122 aa4.58□□□□□ -1.68
TRIM38-201ENST00000357085 C1orf137Q5JT78 98 aa4.58□□□□□ -1.68
TRIM38-201ENST00000357085 FP248Q71RG6 208 aaPredicted RBP4.58□□□□□ -1.68
TRIM38-201ENST00000357085 ZNF702PQ9H963 129 aa4.58□□□□□ -1.68
TRIM38-201ENST00000357085 PRR4Q16378 134 aa4.58□□□□□ -1.68
TRIM38-201ENST00000357085 FASNP49327 2511 aaKnown RBP4.57□□□□□ -1.68
TRIM38-201ENST00000357085 IGHV4-30-2A0A087WSY4 118 aa4.57□□□□□ -1.68
TRIM38-201ENST00000357085 GOLGB1Q14789 3259 aaKnown RBP4.57□□□□□ -1.68
TRIM38-201ENST00000357085 DEFB136Q30KP8 78 aa4.57□□□□□ -1.68
TRIM38-201ENST00000357085 GRNP28799 593 aaKnown RBP4.57□□□□□ -1.68
TRIM38-201ENST00000357085 H3BNG1 76 aa4.56□□□□□ -1.68
TRIM38-201ENST00000357085 Q96MF0 132 aa4.56□□□□□ -1.68
TRIM38-201ENST00000357085 C7orf65Q6ZTY9 151 aa4.56□□□□□ -1.68
TRIM38-201ENST00000357085 SYCNQ0VAF6 134 aa4.56□□□□□ -1.68
TRIM38-201ENST00000357085 CYSRT1A8MQ03 144 aa4.56□□□□□ -1.68
TRIM38-201ENST00000357085 Q8NBF4 154 aa4.56□□□□□ -1.68
TRIM38-201ENST00000357085 PRR3P79522 188 aaKnown RBP4.56□□□□□ -1.68
TRIM38-201ENST00000357085 PCNTO95613 3336 aa4.56□□□□□ -1.68
TRIM38-201ENST00000357085 EPM2AB3EWF7 344 aa4.55□□□□□ -1.68
TRIM38-201ENST00000357085 ODF3L2Q3SX64 289 aa4.55□□□□□ -1.68
TRIM38-201ENST00000357085 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.55□□□□□ -1.68
TRIM38-201ENST00000357085 Q8N9L7 120 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms