RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 CRPP02741 224 aa17.42■□□□□ 0.38
CLK2-201ENST00000355560 MALP21145 153 aa17.41■□□□□ 0.38
CLK2-201ENST00000355560 SFTA2Q6UW10 78 aa17.41■□□□□ 0.38
CLK2-201ENST00000355560 UBE2WQ96B02 151 aa17.41■□□□□ 0.38
CLK2-201ENST00000355560 GAGE12HA6NDE8 117 aa17.39■□□□□ 0.38
CLK2-201ENST00000355560 C15orf53Q8NAA6 179 aa17.39■□□□□ 0.37
CLK2-201ENST00000355560 SOSTDC1Q6X4U4 206 aa17.38■□□□□ 0.37
CLK2-201ENST00000355560 COPS9Q8WXC6 57 aa17.38■□□□□ 0.37
CLK2-201ENST00000355560 LOC107984156A0A0G2JMH3 177 aa17.36■□□□□ 0.37
CLK2-201ENST00000355560 C2orf82Q6UX34 121 aa17.36■□□□□ 0.37
CLK2-201ENST00000355560 ARL17AQ8IVW1 177 aa17.36■□□□□ 0.37
CLK2-201ENST00000355560 IBA57-AS1B1ANH7 110 aa17.35■□□□□ 0.37
CLK2-201ENST00000355560 H7C2G1 150 aa17.35■□□□□ 0.37
CLK2-201ENST00000355560 MIR7-3HGQ8N6C7 128 aa17.35■□□□□ 0.37
CLK2-201ENST00000355560 ERG28Q9UKR5 140 aa17.35■□□□□ 0.37
CLK2-201ENST00000355560 TRAV8-4A0A0B4J246 113 aa17.35■□□□□ 0.37
CLK2-201ENST00000355560 LINC00158P58513 81 aa17.35■□□□□ 0.37
CLK2-201ENST00000355560 KIAA0087Q14695 138 aa17.35■□□□□ 0.37
CLK2-201ENST00000355560 CKS1BP61024 79 aa17.34■□□□□ 0.37
CLK2-201ENST00000355560 CFAP161Q6P656 301 aa17.33■□□□□ 0.37
CLK2-201ENST00000355560 B9D2Q9BPU9 175 aa17.33■□□□□ 0.37
CLK2-201ENST00000355560 LINC01556Q5JQF7 62 aa17.33■□□□□ 0.36
CLK2-201ENST00000355560 PFN2P35080 140 aa17.32■□□□□ 0.36
CLK2-201ENST00000355560 Q1RN00 199 aa17.32■□□□□ 0.36
CLK2-201ENST00000355560 COL7A1Q02388 2944 aa17.31■□□□□ 0.36
CLK2-201ENST00000355560 CXCL5P42830 114 aa17.3■□□□□ 0.36
CLK2-201ENST00000355560 LYRM7Q5U5X0 104 aa17.29■□□□□ 0.36
CLK2-201ENST00000355560 PPDPFQ9H3Y8 114 aa17.29■□□□□ 0.36
CLK2-201ENST00000355560 DNAH9Q9NYC9 4486 aa17.29■□□□□ 0.36
CLK2-201ENST00000355560 STAB2Q8WWQ8 2551 aa17.29■□□□□ 0.36
CLK2-201ENST00000355560 H3BMG7 143 aa17.29■□□□□ 0.36
CLK2-201ENST00000355560 KLK5Q9Y337 293 aaPredicted RBP17.29■□□□□ 0.36
CLK2-201ENST00000355560 PSMB2P49721 201 aa17.28■□□□□ 0.36
CLK2-201ENST00000355560 SPAG11BQ08648 103 aa17.27■□□□□ 0.36
CLK2-201ENST00000355560 LINC00588Q9Y4M8 146 aa17.27■□□□□ 0.36
CLK2-201ENST00000355560 DNAH10OSP0CZ25 163 aa17.26■□□□□ 0.35
CLK2-201ENST00000355560 RPL13AP40429 203 aaKnown RBP17.26■□□□□ 0.35
CLK2-201ENST00000355560 SCGB1C2P0DMR2 95 aa17.25■□□□□ 0.35
CLK2-201ENST00000355560 CCL18P55774 89 aa17.24■□□□□ 0.35
CLK2-201ENST00000355560 KRTAP26-1Q6PEX3 210 aa17.23■□□□□ 0.35
CLK2-201ENST00000355560 C6orf223Q8N319 242 aa17.23■□□□□ 0.35
CLK2-201ENST00000355560 LINC00526Q96FQ7 95 aa17.23■□□□□ 0.35
CLK2-201ENST00000355560 SND1-IT1Q9HBX3 110 aa17.22■□□□□ 0.35
CLK2-201ENST00000355560 TCL1BO95988 128 aa17.21■□□□□ 0.35
CLK2-201ENST00000355560 C1orf43Q9BWL3 253 aa17.21■□□□□ 0.35
CLK2-201ENST00000355560 TRBV30A0A0K0K1B3 111 aa17.2■□□□□ 0.34
CLK2-201ENST00000355560 TRIAP1O43715 76 aa17.2■□□□□ 0.34
CLK2-201ENST00000355560 TRBV20-1A0A075B6N2 111 aa17.19■□□□□ 0.34
CLK2-201ENST00000355560 COX17Q14061 63 aa17.18■□□□□ 0.34
CLK2-201ENST00000355560 C9orf116Q5BN46 136 aaPredicted RBP17.18■□□□□ 0.34
CLK2-201ENST00000355560 C10orf25Q5T742 122 aa17.18■□□□□ 0.34
CLK2-201ENST00000355560 UNQ6190/PRO20217Q6UXQ8 127 aa17.18■□□□□ 0.34
CLK2-201ENST00000355560 IGKV2D-24A0A075B6R9 120 aa17.17■□□□□ 0.34
CLK2-201ENST00000355560 MTURNQ8N3F0 131 aa17.17■□□□□ 0.34
CLK2-201ENST00000355560 DNHD1Q96M86 4753 aa17.16■□□□□ 0.34
CLK2-201ENST00000355560 Q9HAA7 133 aa17.15■□□□□ 0.34
CLK2-201ENST00000355560 F8W1H4 67 aa17.15■□□□□ 0.34
CLK2-201ENST00000355560 IGKV2-28A0A075B6P5 120 aa17.14■□□□□ 0.33
CLK2-201ENST00000355560 IGKV2D-28P01615 120 aa17.14■□□□□ 0.33
CLK2-201ENST00000355560 NTN5Q8WTR8 489 aaPredicted RBP17.14■□□□□ 0.33
CLK2-201ENST00000355560 HIGD2BQ4VC39 106 aa17.13■□□□□ 0.33
CLK2-201ENST00000355560 UPK3BQ9BT76 320 aa17.13■□□□□ 0.33
CLK2-201ENST00000355560 PRO0461Q9UI25 63 aa17.13■□□□□ 0.33
CLK2-201ENST00000355560 COX6CP09669 75 aa17.12■□□□□ 0.33
CLK2-201ENST00000355560 LINC00337Q8N6G1 96 aa17.12■□□□□ 0.33
CLK2-201ENST00000355560 TRAV13-2A0A0B4J235 113 aa17.12■□□□□ 0.33
CLK2-201ENST00000355560 NHLRC4P0CG21 123 aaPredicted RBP17.12■□□□□ 0.33
CLK2-201ENST00000355560 ZNF561-AS1K7EIQ3 104 aa17.11■□□□□ 0.33
CLK2-201ENST00000355560 C15orf56Q8N910 161 aa17.11■□□□□ 0.33
CLK2-201ENST00000355560 WFDC2Q14508 124 aa17.1■□□□□ 0.33
CLK2-201ENST00000355560 C6orf48Q9UBA6 75 aa17.08■□□□□ 0.32
CLK2-201ENST00000355560 GVQW2A0A096LPI5 108 aaPredicted RBP17.07■□□□□ 0.32
CLK2-201ENST00000355560 ATXN8Q156A1 80 aa17.07■□□□□ 0.32
CLK2-201ENST00000355560 CAMK2N2Q96S95 79 aa17.06■□□□□ 0.32
CLK2-201ENST00000355560 OCIAD2Q56VL3 154 aa17.04■□□□□ 0.32
CLK2-201ENST00000355560 MUC7Q8TAX7 377 aa17.04■□□□□ 0.32
CLK2-201ENST00000355560 CLEC2BQ92478 149 aa17.04■□□□□ 0.32
CLK2-201ENST00000355560 APLNQ9ULZ1 77 aa17.04■□□□□ 0.32
CLK2-201ENST00000355560 SMCPP49901 116 aaPredicted RBP17.03■□□□□ 0.32
CLK2-201ENST00000355560 PRKDCP78527 4128 aaKnown RBP17.02■□□□□ 0.32
CLK2-201ENST00000355560 C2orf48Q96LS8 159 aa17.01■□□□□ 0.31
CLK2-201ENST00000355560 ETDBQ3ZM63 59 aa17■□□□□ 0.31
CLK2-201ENST00000355560 C9JAW5 83 aa17■□□□□ 0.31
CLK2-201ENST00000355560 NDUFC2O95298 119 aa17■□□□□ 0.31
CLK2-201ENST00000355560 Q6ZRU5 148 aa17■□□□□ 0.31
CLK2-201ENST00000355560 OR13C6PQ8NH95 151 aa17■□□□□ 0.31
CLK2-201ENST00000355560 LINC01620Q4KN68 170 aa16.99■□□□□ 0.31
CLK2-201ENST00000355560 UBE2DNLQ8IWF7 75 aa16.99■□□□□ 0.31
CLK2-201ENST00000355560 MEGF8Q7Z7M0 2845 aa16.99■□□□□ 0.31
CLK2-201ENST00000355560 RPL28P46779 137 aaKnown RBP16.99■□□□□ 0.31
CLK2-201ENST00000355560 LST1O00453 97 aa16.98■□□□□ 0.31
CLK2-201ENST00000355560 PRR3P79522 188 aaKnown RBP16.98■□□□□ 0.31
CLK2-201ENST00000355560 RMI2Q96E14 147 aa16.98■□□□□ 0.31
CLK2-201ENST00000355560 LYSTQ99698 3801 aa16.97■□□□□ 0.31
CLK2-201ENST00000355560 SMIM11BQ8TCY0 68 aa16.97■□□□□ 0.31
CLK2-201ENST00000355560 NUPR2A6NF83 97 aa16.96■□□□□ 0.31
CLK2-201ENST00000355560 Q8NDZ9 215 aa16.96■□□□□ 0.31
CLK2-201ENST00000355560 SLC25A20O43772 301 aa16.96■□□□□ 0.3
CLK2-201ENST00000355560 CSMD3Q7Z407 3707 aa16.95■□□□□ 0.3
CLK2-201ENST00000355560 DNAH1Q9P2D7 4330 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 164.3 ms