RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 PIEZO1Q92508 2521 aa9.41□□□□□ -0.9
SCN8A-202ENST00000355133 XGP55808 180 aa9.41□□□□□ -0.9
SCN8A-202ENST00000355133 Q6ZVQ6 151 aa9.41□□□□□ -0.9
SCN8A-202ENST00000355133 RAI1Q7Z5J4 1906 aaPredicted RBP9.41□□□□□ -0.9
SCN8A-202ENST00000355133 ADAMTSL4-AS1Q5T5F5 129 aa9.41□□□□□ -0.9
SCN8A-202ENST00000355133 IGHV6-1A0A0B4J1U7 121 aa9.41□□□□□ -0.9
SCN8A-202ENST00000355133 A6NED7 52 aa9.41□□□□□ -0.9
SCN8A-202ENST00000355133 V9GYY9 64 aa9.41□□□□□ -0.9
SCN8A-202ENST00000355133 Q6JHZ5 121 aa9.4□□□□□ -0.9
SCN8A-202ENST00000355133 ATP5EP56381 51 aaPredicted RBP9.4□□□□□ -0.9
SCN8A-202ENST00000355133 CCDC179H3BU77 68 aa9.4□□□□□ -0.9
SCN8A-202ENST00000355133 LYPD5Q6UWN5 251 aa9.4□□□□□ -0.9
SCN8A-202ENST00000355133 COX7CP15954 63 aa9.39□□□□□ -0.91
SCN8A-202ENST00000355133 C1orf134Q5TEV5 83 aa9.39□□□□□ -0.91
SCN8A-202ENST00000355133 AMELXQ99217 191 aa9.38□□□□□ -0.91
SCN8A-202ENST00000355133 Q9BRP9 147 aa9.38□□□□□ -0.91
SCN8A-202ENST00000355133 BEAN1Q3B7T3 259 aa9.37□□□□□ -0.91
SCN8A-202ENST00000355133 PTPRSQ13332 1948 aa9.37□□□□□ -0.91
SCN8A-202ENST00000355133 LINC00208Q96KT6 92 aa9.36□□□□□ -0.91
SCN8A-202ENST00000355133 CSDC2Q9Y534 153 aaKnown RBP9.36□□□□□ -0.91
SCN8A-202ENST00000355133 EXPH5Q8NEV8 1989 aa9.36□□□□□ -0.91
SCN8A-202ENST00000355133 A0A087WVE0 104 aa9.36□□□□□ -0.91
SCN8A-202ENST00000355133 DEFB116Q30KQ4 102 aa9.35□□□□□ -0.91
SCN8A-202ENST00000355133 Q6Q795 121 aa9.34□□□□□ -0.91
SCN8A-202ENST00000355133 LINC01547P58512 204 aaPredicted RBP9.34□□□□□ -0.91
SCN8A-202ENST00000355133 A8MTW9 85 aa9.34□□□□□ -0.91
SCN8A-202ENST00000355133 A0A1B0GUV1 79 aa9.33□□□□□ -0.92
SCN8A-202ENST00000355133 Q6ZRU5 148 aa9.33□□□□□ -0.92
SCN8A-202ENST00000355133 X6R8D5 127 aa9.33□□□□□ -0.92
SCN8A-202ENST00000355133 COX8CQ7Z4L0 72 aa9.33□□□□□ -0.92
SCN8A-202ENST00000355133 MYO9AB2RTY4 2548 aa9.33□□□□□ -0.92
SCN8A-202ENST00000355133 A0A087WSZ3 146 aa9.32□□□□□ -0.92
SCN8A-202ENST00000355133 LINC00575Q6W349 94 aa9.32□□□□□ -0.92
SCN8A-202ENST00000355133 C2orf48Q96LS8 159 aa9.32□□□□□ -0.92
SCN8A-202ENST00000355133 SRCAPQ6ZRS2 3230 aa9.32□□□□□ -0.92
SCN8A-202ENST00000355133 A0A096LNJ9 63 aa9.31□□□□□ -0.92
SCN8A-202ENST00000355133 PRLHP81277 87 aa9.31□□□□□ -0.92
SCN8A-202ENST00000355133 PRYO14603 147 aa9.31□□□□□ -0.92
SCN8A-202ENST00000355133 FHL3Q13643 280 aa9.31□□□□□ -0.92
SCN8A-202ENST00000355133 PCOTHQ58A44 107 aa9.3□□□□□ -0.92
SCN8A-202ENST00000355133 FSHBP01225 129 aa9.3□□□□□ -0.92
SCN8A-202ENST00000355133 TRAV7A0A075B6U4 112 aa9.3□□□□□ -0.92
SCN8A-202ENST00000355133 EML5Q05BV3 1969 aa9.3□□□□□ -0.92
SCN8A-202ENST00000355133 JMJD1CQ15652 2540 aa9.3□□□□□ -0.92
SCN8A-202ENST00000355133 F8WDY8 70 aa9.29□□□□□ -0.92
SCN8A-202ENST00000355133 TRBV7-6A0A0J9YX20 115 aa9.29□□□□□ -0.92
SCN8A-202ENST00000355133 SPINK1P00995 79 aa9.28□□□□□ -0.92
SCN8A-202ENST00000355133 Q8N3U1 123 aa9.27□□□□□ -0.93
SCN8A-202ENST00000355133 TLN1Q9Y490 2541 aaKnown RBP9.27□□□□□ -0.93
SCN8A-202ENST00000355133 CPAMD8Q8IZJ3 1885 aa9.27□□□□□ -0.93
SCN8A-202ENST00000355133 SOSTDC1Q6X4U4 206 aa9.26□□□□□ -0.93
SCN8A-202ENST00000355133 SBSPONQ8IVN8 264 aa9.26□□□□□ -0.93
SCN8A-202ENST00000355133 C22orf24Q9Y442 160 aa9.26□□□□□ -0.93
SCN8A-202ENST00000355133 COL5A1P20908 1838 aaPredicted RBP9.26□□□□□ -0.93
SCN8A-202ENST00000355133 NHLRC4P0CG21 123 aaPredicted RBP9.25□□□□□ -0.93
SCN8A-202ENST00000355133 C11orf72Q8NBR9 251 aa9.25□□□□□ -0.93
SCN8A-202ENST00000355133 SMCR5Q8TEV8 140 aa9.24□□□□□ -0.93
SCN8A-202ENST00000355133 MDFIQ99750 246 aa9.24□□□□□ -0.93
SCN8A-202ENST00000355133 LINC01561Q8N1V8 128 aa9.23□□□□□ -0.93
SCN8A-202ENST00000355133 ADAMTS20P59510 1910 aa9.23□□□□□ -0.93
SCN8A-202ENST00000355133 LINC00337Q8N6G1 96 aa9.23□□□□□ -0.93
SCN8A-202ENST00000355133 H0Y9P7 68 aa9.23□□□□□ -0.93
SCN8A-202ENST00000355133 Q8N2B8 174 aa9.23□□□□□ -0.93
SCN8A-202ENST00000355133 KIF25-AS1Q9Y6Z4 181 aa9.22□□□□□ -0.93
SCN8A-202ENST00000355133 AGRNO00468 2067 aa9.22□□□□□ -0.93
SCN8A-202ENST00000355133 SMIM26A0A096LP01 95 aa9.21□□□□□ -0.93
SCN8A-202ENST00000355133 HCG22E2RYF7 251 aa9.21□□□□□ -0.94
SCN8A-202ENST00000355133 ABCA12Q86UK0 2595 aa9.21□□□□□ -0.94
SCN8A-202ENST00000355133 TRBV7-7A0A0K0K1E9 115 aa9.21□□□□□ -0.94
SCN8A-202ENST00000355133 WDR87Q6ZQQ6 2873 aa9.2□□□□□ -0.94
SCN8A-202ENST00000355133 LIMD2Q9BT23 127 aa9.19□□□□□ -0.94
SCN8A-202ENST00000355133 LINC00846Q9NV44 126 aa9.19□□□□□ -0.94
SCN8A-202ENST00000355133 KIAA0087Q14695 138 aa9.18□□□□□ -0.94
SCN8A-202ENST00000355133 ZFYVE26Q68DK2 2539 aa9.18□□□□□ -0.94
SCN8A-202ENST00000355133 TET2Q6N021 2002 aaPredicted RBP9.16□□□□□ -0.94
SCN8A-202ENST00000355133 IGLV5-39A0A0G2JS06 123 aa9.15□□□□□ -0.94
SCN8A-202ENST00000355133 LRRK2Q5S007 2527 aa9.15□□□□□ -0.94
SCN8A-202ENST00000355133 PSPHP1O15172 72 aa9.15□□□□□ -0.94
SCN8A-202ENST00000355133 LINC00167Q96N53 147 aa9.15□□□□□ -0.94
SCN8A-202ENST00000355133 IGKV2D-30A0A075B6S6 120 aa9.15□□□□□ -0.94
SCN8A-202ENST00000355133 IGHV3OR16-9A0A0B4J2B5 98 aa9.15□□□□□ -0.94
SCN8A-202ENST00000355133 IGKV2-30P06310 120 aa9.15□□□□□ -0.94
SCN8A-202ENST00000355133 SPACA4Q8TDM5 124 aa9.15□□□□□ -0.95
SCN8A-202ENST00000355133 TLN2Q9Y4G6 2542 aa9.14□□□□□ -0.95
SCN8A-202ENST00000355133 FN1P02751 2386 aaKnown RBP9.14□□□□□ -0.95
SCN8A-202ENST00000355133 C6orf48Q9UBA6 75 aa9.14□□□□□ -0.95
SCN8A-202ENST00000355133 LINC00315P59091 139 aa9.13□□□□□ -0.95
SCN8A-202ENST00000355133 C1orf195Q5TG92 126 aa9.13□□□□□ -0.95
SCN8A-202ENST00000355133 FAM19A4Q96LR4 140 aa9.13□□□□□ -0.95
SCN8A-202ENST00000355133 MOBPQ13875 183 aa9.13□□□□□ -0.95
SCN8A-202ENST00000355133 CRYGAP11844 174 aa9.13□□□□□ -0.95
SCN8A-202ENST00000355133 KRTAP24-1Q3LI83 254 aa9.13□□□□□ -0.95
SCN8A-202ENST00000355133 TMEM254Q8TBM7 123 aa9.13□□□□□ -0.95
SCN8A-202ENST00000355133 USP9XQ93008 2570 aaPredicted RBP9.11□□□□□ -0.95
SCN8A-202ENST00000355133 PMAIP1Q13794 54 aa9.11□□□□□ -0.95
SCN8A-202ENST00000355133 C1orf64Q8NEQ6 169 aa9.11□□□□□ -0.95
SCN8A-202ENST00000355133 Q9UF83 564 aa9.11□□□□□ -0.95
SCN8A-202ENST00000355133 SPATA3Q8NHX4 192 aa9.1□□□□□ -0.95
SCN8A-202ENST00000355133 SMIM29Q86T20 159 aa9.1□□□□□ -0.95
SCN8A-202ENST00000355133 PHF5AQ7RTV0 110 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms