RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 C11orf72Q8NBR9 251 aa8.8□□□□□ -1
PCDHB11-201ENST00000354757 CELA1Q9UNI1 258 aa8.8□□□□□ -1
PCDHB11-201ENST00000354757 KIF25-AS1Q9Y6Z4 181 aa8.8□□□□□ -1
PCDHB11-201ENST00000354757 KLK5Q9Y337 293 aaPredicted RBP8.8□□□□□ -1
PCDHB11-201ENST00000354757 BAALC-AS2P0C853 105 aa8.79□□□□□ -1
PCDHB11-201ENST00000354757 POM121L12Q8N7R1 296 aa8.79□□□□□ -1
PCDHB11-201ENST00000354757 KRTAP1-1Q07627 177 aa8.79□□□□□ -1
PCDHB11-201ENST00000354757 TRAV10A0A0B4J240 114 aa8.79□□□□□ -1
PCDHB11-201ENST00000354757 PYGO1Q9Y3Y4 419 aa8.79□□□□□ -1
PCDHB11-201ENST00000354757 LINC00959A0A1B0GUT2 108 aa8.78□□□□□ -1
PCDHB11-201ENST00000354757 CDC42SE2Q9NRR3 84 aa8.78□□□□□ -1
PCDHB11-201ENST00000354757 HIVEP1P15822 2718 aa8.78□□□□□ -1
PCDHB11-201ENST00000354757 TSPEAR-AS2P59090 65 aa8.78□□□□□ -1
PCDHB11-201ENST00000354757 LINC00242Q5T6M2 205 aa8.78□□□□□ -1
PCDHB11-201ENST00000354757 CHCHD7Q9BUK0 85 aa8.78□□□□□ -1
PCDHB11-201ENST00000354757 IGKV3D-7A0A0C4DH55 119 aa8.77□□□□□ -1.01
PCDHB11-201ENST00000354757 LINC00315P59091 139 aa8.77□□□□□ -1.01
PCDHB11-201ENST00000354757 H3BT86 120 aa8.76□□□□□ -1.01
PCDHB11-201ENST00000354757 FAM19A4Q96LR4 140 aa8.76□□□□□ -1.01
PCDHB11-201ENST00000354757 A0A0B4J2C4 111 aa8.76□□□□□ -1.01
PCDHB11-201ENST00000354757 INAFM2P0DMQ5 153 aa8.76□□□□□ -1.01
PCDHB11-201ENST00000354757 COX6A2Q02221 97 aa8.76□□□□□ -1.01
PCDHB11-201ENST00000354757 MIAQ16674 131 aa8.76□□□□□ -1.01
PCDHB11-201ENST00000354757 LELP1Q5T871 98 aa8.75□□□□□ -1.01
PCDHB11-201ENST00000354757 GHRHP01286 108 aa8.75□□□□□ -1.01
PCDHB11-201ENST00000354757 KRTAP10-3P60369 221 aa8.75□□□□□ -1.01
PCDHB11-201ENST00000354757 HRNRQ86YZ3 2850 aaPredicted RBP8.75□□□□□ -1.01
PCDHB11-201ENST00000354757 TRACP01848 142 aa8.74□□□□□ -1.01
PCDHB11-201ENST00000354757 TMEM126AQ9H061 195 aa8.74□□□□□ -1.01
PCDHB11-201ENST00000354757 CR1P17927 2039 aa8.74□□□□□ -1.01
PCDHB11-201ENST00000354757 F8WEM9 126 aa8.74□□□□□ -1.01
PCDHB11-201ENST00000354757 TIRAPP58753 221 aa8.74□□□□□ -1.01
PCDHB11-201ENST00000354757 C9orf116Q5BN46 136 aaPredicted RBP8.74□□□□□ -1.01
PCDHB11-201ENST00000354757 NIPBLQ6KC79 2804 aaeCLIP8.73□□□□□ -1.01
PCDHB11-201ENST00000354757 IGLV4-69A0A075B6H9 119 aa8.73□□□□□ -1.01
PCDHB11-201ENST00000354757 WFDC10BQ8IUB3 73 aa8.73□□□□□ -1.01
PCDHB11-201ENST00000354757 LINC00308Q8TCZ7 52 aa8.73□□□□□ -1.01
PCDHB11-201ENST00000354757 ETDCA0A1B0GVM5 59 aa8.72□□□□□ -1.01
PCDHB11-201ENST00000354757 A0A1B0GX51 115 aa8.72□□□□□ -1.01
PCDHB11-201ENST00000354757 MRPS36P82909 103 aaKnown RBP8.72□□□□□ -1.01
PCDHB11-201ENST00000354757 KLK9Q2XQG4 91 aa8.72□□□□□ -1.01
PCDHB11-201ENST00000354757 FBN2P35556 2912 aa8.72□□□□□ -1.01
PCDHB11-201ENST00000354757 CD164L2Q6UWJ8 174 aa8.72□□□□□ -1.01
PCDHB11-201ENST00000354757 CXCL5P42830 114 aa8.71□□□□□ -1.01
PCDHB11-201ENST00000354757 H7C423 109 aa8.71□□□□□ -1.02
PCDHB11-201ENST00000354757 NTM-AS1Q6ZSK4 140 aa8.71□□□□□ -1.02
PCDHB11-201ENST00000354757 OVOL2Q9BRP0 275 aa8.71□□□□□ -1.02
PCDHB11-201ENST00000354757 SPATA3Q8NHX4 192 aa8.71□□□□□ -1.02
PCDHB11-201ENST00000354757 TRBV30A0A0K0K1B3 111 aa8.7□□□□□ -1.02
PCDHB11-201ENST00000354757 ACYP1P07311 99 aa8.7□□□□□ -1.02
PCDHB11-201ENST00000354757 UNQ6190/PRO20217Q6UXQ8 127 aa8.7□□□□□ -1.02
PCDHB11-201ENST00000354757 SPANXCQ9NY87 97 aa8.7□□□□□ -1.02
PCDHB11-201ENST00000354757 X6R8D5 127 aa8.7□□□□□ -1.02
PCDHB11-201ENST00000354757 LY6G6CO95867 125 aa8.7□□□□□ -1.02
PCDHB11-201ENST00000354757 HAMPP81172 84 aa8.7□□□□□ -1.02
PCDHB11-201ENST00000354757 SBSPONQ8IVN8 264 aa8.7□□□□□ -1.02
PCDHB11-201ENST00000354757 Q8N3U1 123 aa8.69□□□□□ -1.02
PCDHB11-201ENST00000354757 SMIM1B2RUZ4 78 aa8.69□□□□□ -1.02
PCDHB11-201ENST00000354757 J3KT08 172 aa8.69□□□□□ -1.02
PCDHB11-201ENST00000354757 BSNQ9UPA5 3926 aa8.69□□□□□ -1.02
PCDHB11-201ENST00000354757 SYCNQ0VAF6 134 aa8.68□□□□□ -1.02
PCDHB11-201ENST00000354757 SDIM1Q6ZPB5 146 aa8.68□□□□□ -1.02
PCDHB11-201ENST00000354757 LINC00643Q86TS7 51 aa8.68□□□□□ -1.02
PCDHB11-201ENST00000354757 SLPIP03973 132 aa8.68□□□□□ -1.02
PCDHB11-201ENST00000354757 hADV29S1A0JD25 119 aa8.68□□□□□ -1.02
PCDHB11-201ENST00000354757 M0QXV9 152 aa8.68□□□□□ -1.02
PCDHB11-201ENST00000354757 IGKV2-28A0A075B6P5 120 aa8.67□□□□□ -1.02
PCDHB11-201ENST00000354757 CYSRT1A8MQ03 144 aa8.67□□□□□ -1.02
PCDHB11-201ENST00000354757 IGKV2D-28P01615 120 aa8.67□□□□□ -1.02
PCDHB11-201ENST00000354757 FAM19A5Q7Z5A7 132 aaPredicted RBP8.67□□□□□ -1.02
PCDHB11-201ENST00000354757 SVEP1Q4LDE5 3571 aa8.67□□□□□ -1.02
PCDHB11-201ENST00000354757 PRR3P79522 188 aaKnown RBP8.67□□□□□ -1.02
PCDHB11-201ENST00000354757 ORMDL1Q9P0S3 153 aa8.67□□□□□ -1.02
PCDHB11-201ENST00000354757 A0A096LNI7 61 aa8.66□□□□□ -1.02
PCDHB11-201ENST00000354757 HIGD2AQ9BW72 106 aa8.66□□□□□ -1.02
PCDHB11-201ENST00000354757 C14orf132Q9NPU4 83 aa8.66□□□□□ -1.02
PCDHB11-201ENST00000354757 IBA57-AS1B1ANH7 110 aa8.66□□□□□ -1.02
PCDHB11-201ENST00000354757 UQCRQO14949 82 aa8.66□□□□□ -1.02
PCDHB11-201ENST00000354757 C6orf223Q8N319 242 aa8.65□□□□□ -1.02
PCDHB11-201ENST00000354757 ATOX1O00244 68 aa8.65□□□□□ -1.02
PCDHB11-201ENST00000354757 LYPD5Q6UWN5 251 aa8.65□□□□□ -1.02
PCDHB11-201ENST00000354757 C3orf22Q8N5N4 141 aa8.65□□□□□ -1.02
PCDHB11-201ENST00000354757 PPDPFQ9H3Y8 114 aa8.65□□□□□ -1.02
PCDHB11-201ENST00000354757 LST1O00453 97 aa8.65□□□□□ -1.02
PCDHB11-201ENST00000354757 AMELXQ99217 191 aa8.65□□□□□ -1.02
PCDHB11-201ENST00000354757 C6orf99Q4VX62 202 aa8.65□□□□□ -1.03
PCDHB11-201ENST00000354757 ADAMTSL4-AS1Q5T5F5 129 aa8.65□□□□□ -1.03
PCDHB11-201ENST00000354757 DSCR8Q96T75 97 aa8.64□□□□□ -1.03
PCDHB11-201ENST00000354757 DIRC1Q969H9 104 aa8.64□□□□□ -1.03
PCDHB11-201ENST00000354757 LOC107984640A0A0U1RRK4 108 aa8.64□□□□□ -1.03
PCDHB11-201ENST00000354757 H0YGX0 51 aa8.64□□□□□ -1.03
PCDHB11-201ENST00000354757 IL17DQ8TAD2 202 aa8.64□□□□□ -1.03
PCDHB11-201ENST00000354757 Q6Q795 121 aa8.63□□□□□ -1.03
PCDHB11-201ENST00000354757 LINC01546A6NGU7 62 aa8.63□□□□□ -1.03
PCDHB11-201ENST00000354757 WFDC9Q8NEX5 89 aa8.62□□□□□ -1.03
PCDHB11-201ENST00000354757 RPL37AP8A6NKH3 93 aa8.61□□□□□ -1.03
PCDHB11-201ENST00000354757 UBE2AP49459 152 aa8.61□□□□□ -1.03
PCDHB11-201ENST00000354757 A0A087WZ39 114 aa8.61□□□□□ -1.03
PCDHB11-201ENST00000354757 GIG44P09565 113 aaPredicted RBP8.61□□□□□ -1.03
PCDHB11-201ENST00000354757 SPANXDQ9BXN6 97 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms