RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 C22orf24Q9Y442 160 aa6.02□□□□□ -1.45
TRIM55-204ENST00000353317 SVIPQ8NHG7 77 aa6.01□□□□□ -1.45
TRIM55-204ENST00000353317 SMCR5Q8TEV8 140 aa6.01□□□□□ -1.45
TRIM55-204ENST00000353317 DEFB4AO15263 64 aa6.01□□□□□ -1.45
TRIM55-204ENST00000353317 HERV-K104P63124 156 aa6.01□□□□□ -1.45
TRIM55-204ENST00000353317 DNHD1Q96M86 4753 aa6□□□□□ -1.45
TRIM55-204ENST00000353317 TRACP01848 142 aa6□□□□□ -1.45
TRIM55-204ENST00000353317 BAALC-AS2P0C853 105 aa6□□□□□ -1.45
TRIM55-204ENST00000353317 ACYP1P07311 99 aa6□□□□□ -1.45
TRIM55-204ENST00000353317 LOC100131303A0A0U1RQF7 123 aa5.99□□□□□ -1.45
TRIM55-204ENST00000353317 UBE2L6O14933 153 aa5.99□□□□□ -1.45
TRIM55-204ENST00000353317 COL7A1Q02388 2944 aa5.99□□□□□ -1.45
TRIM55-204ENST00000353317 LINC00337Q8N6G1 96 aa5.99□□□□□ -1.45
TRIM55-204ENST00000353317 TMEM243Q9BU79 118 aa5.99□□□□□ -1.45
TRIM55-204ENST00000353317 Q9HAA7 133 aa5.99□□□□□ -1.45
TRIM55-204ENST00000353317 IGKV2-28A0A075B6P5 120 aa5.98□□□□□ -1.45
TRIM55-204ENST00000353317 IGKV2D-28P01615 120 aa5.98□□□□□ -1.45
TRIM55-204ENST00000353317 MIR7-3HGQ8N6C7 128 aa5.98□□□□□ -1.45
TRIM55-204ENST00000353317 C16orf74Q96GX8 76 aa5.98□□□□□ -1.45
TRIM55-204ENST00000353317 OVOL2Q9BRP0 275 aa5.98□□□□□ -1.45
TRIM55-204ENST00000353317 FAM236AA0A1B0GUQ0 79 aa5.98□□□□□ -1.45
TRIM55-204ENST00000353317 FAM236BA0A1B0GV22 79 aa5.98□□□□□ -1.45
TRIM55-204ENST00000353317 RPL28P46779 137 aaKnown RBP5.98□□□□□ -1.45
TRIM55-204ENST00000353317 SDIM1Q6ZPB5 146 aa5.98□□□□□ -1.45
TRIM55-204ENST00000353317 PPDPFQ9H3Y8 114 aa5.98□□□□□ -1.45
TRIM55-204ENST00000353317 RETNQ9HD89 108 aa5.98□□□□□ -1.45
TRIM55-204ENST00000353317 TRAV13-2A0A0B4J235 113 aa5.97□□□□□ -1.45
TRIM55-204ENST00000353317 IGKV3OR2-268A0A0C4DH90 116 aa5.97□□□□□ -1.45
TRIM55-204ENST00000353317 KIR2DL5BQ8NHK3 375 aa5.97□□□□□ -1.45
TRIM55-204ENST00000353317 COX7B2Q8TF08 81 aa5.97□□□□□ -1.45
TRIM55-204ENST00000353317 IMUPQ9GZP8 106 aa5.97□□□□□ -1.45
TRIM55-204ENST00000353317 TOMM7Q9P0U1 55 aa5.97□□□□□ -1.45
TRIM55-204ENST00000353317 TRGV2A0A075B6R0 118 aa5.97□□□□□ -1.45
TRIM55-204ENST00000353317 LINC00643Q86TS7 51 aa5.97□□□□□ -1.45
TRIM55-204ENST00000353317 SND1-IT1Q9HBX3 110 aa5.97□□□□□ -1.45
TRIM55-204ENST00000353317 HUWE1Q7Z6Z7 4374 aaKnown RBP5.96□□□□□ -1.45
TRIM55-204ENST00000353317 IGLV4-60A0A075B6I1 120 aa5.96□□□□□ -1.45
TRIM55-204ENST00000353317 CRPP02741 224 aa5.96□□□□□ -1.45
TRIM55-204ENST00000353317 KRTAP21-3Q3LHN1 58 aa5.96□□□□□ -1.45
TRIM55-204ENST00000353317 FAM222AQ5U5X8 452 aa5.96□□□□□ -1.45
TRIM55-204ENST00000353317 IGHV4-28A0A0C4DH34 117 aa5.96□□□□□ -1.46
TRIM55-204ENST00000353317 DEFB130BP0DP73 79 aa5.96□□□□□ -1.46
TRIM55-204ENST00000353317 DEFB130AP0DP74 79 aa5.96□□□□□ -1.46
TRIM55-204ENST00000353317 MALP21145 153 aa5.96□□□□□ -1.46
TRIM55-204ENST00000353317 Q8NAQ8 132 aa5.96□□□□□ -1.46
TRIM55-204ENST00000353317 CELA1Q9UNI1 258 aa5.96□□□□□ -1.46
TRIM55-204ENST00000353317 A0A087WYN8 130 aa5.95□□□□□ -1.46
TRIM55-204ENST00000353317 SMIM11BQ8TCY0 68 aa5.95□□□□□ -1.46
TRIM55-204ENST00000353317 IGHV3OR16-9A0A0B4J2B5 98 aa5.95□□□□□ -1.46
TRIM55-204ENST00000353317 TRBV6-4A0A1B0GX49 114 aa5.95□□□□□ -1.46
TRIM55-204ENST00000353317 APOC4P55056 127 aa5.95□□□□□ -1.46
TRIM55-204ENST00000353317 LINC00158P58513 81 aa5.95□□□□□ -1.46
TRIM55-204ENST00000353317 C9orf129Q5T035 196 aaKnown RBP5.95□□□□□ -1.46
TRIM55-204ENST00000353317 CCL18P55774 89 aa5.95□□□□□ -1.46
TRIM55-204ENST00000353317 FHL2Q14192 279 aa5.95□□□□□ -1.46
TRIM55-204ENST00000353317 GAGE2AQ6NT46 116 aa5.95□□□□□ -1.46
TRIM55-204ENST00000353317 LINC00612Q8N6U2 182 aa5.95□□□□□ -1.46
TRIM55-204ENST00000353317 INAFM2P0DMQ5 153 aa5.94□□□□□ -1.46
TRIM55-204ENST00000353317 SMIM20Q8N5G0 67 aa5.94□□□□□ -1.46
TRIM55-204ENST00000353317 TRBV6-8A0A0A6YYG3 113 aa5.94□□□□□ -1.46
TRIM55-204ENST00000353317 TRGV4A0A0C4DH28 118 aa5.94□□□□□ -1.46
TRIM55-204ENST00000353317 K7EIL1 84 aa5.93□□□□□ -1.46
TRIM55-204ENST00000353317 ATP5G1P05496 136 aa5.93□□□□□ -1.46
TRIM55-204ENST00000353317 PFN2P35080 140 aa5.93□□□□□ -1.46
TRIM55-204ENST00000353317 C5orf38Q86SI9 138 aa5.93□□□□□ -1.46
TRIM55-204ENST00000353317 A0A087WZ39 114 aa5.93□□□□□ -1.46
TRIM55-204ENST00000353317 SMIM9A6NGZ8 99 aa5.93□□□□□ -1.46
TRIM55-204ENST00000353317 DNAL4O96015 105 aa5.93□□□□□ -1.46
TRIM55-204ENST00000353317 IBA57-AS1B1ANH7 110 aa5.92□□□□□ -1.46
TRIM55-204ENST00000353317 DNAH9Q9NYC9 4486 aa5.92□□□□□ -1.46
TRIM55-204ENST00000353317 C14orf132Q9NPU4 83 aa5.92□□□□□ -1.46
TRIM55-204ENST00000353317 CXCL5P42830 114 aa5.91□□□□□ -1.46
TRIM55-204ENST00000353317 PRKDCP78527 4128 aaKnown RBP5.91□□□□□ -1.46
TRIM55-204ENST00000353317 H0YGX0 51 aa5.91□□□□□ -1.46
TRIM55-204ENST00000353317 LECT2O14960 151 aa5.91□□□□□ -1.46
TRIM55-204ENST00000353317 PAX4O43316 350 aa5.91□□□□□ -1.46
TRIM55-204ENST00000353317 C11orf68Q9H3H3 251 aaKnown RBP5.91□□□□□ -1.46
TRIM55-204ENST00000353317 STAB2Q8WWQ8 2551 aa5.9□□□□□ -1.46
TRIM55-204ENST00000353317 LINC00959A0A1B0GUT2 108 aa5.9□□□□□ -1.46
TRIM55-204ENST00000353317 MIFP14174 115 aa5.9□□□□□ -1.46
TRIM55-204ENST00000353317 OBSCN-AS1Q96MR7 158 aa5.9□□□□□ -1.46
TRIM55-204ENST00000353317 SLPIP03973 132 aa5.9□□□□□ -1.47
TRIM55-204ENST00000353317 KPRPQ5T749 579 aaPredicted RBP5.9□□□□□ -1.47
TRIM55-204ENST00000353317 C3orf22Q8N5N4 141 aa5.9□□□□□ -1.47
TRIM55-204ENST00000353317 C6orf226Q5I0X4 101 aa5.89□□□□□ -1.47
TRIM55-204ENST00000353317 OR13C6PQ8NH95 151 aa5.89□□□□□ -1.47
TRIM55-204ENST00000353317 MRAPQ8TCY5 172 aa5.89□□□□□ -1.47
TRIM55-204ENST00000353317 TMEM126AQ9H061 195 aa5.89□□□□□ -1.47
TRIM55-204ENST00000353317 UQCRQO14949 82 aa5.89□□□□□ -1.47
TRIM55-204ENST00000353317 XCL1P47992 114 aa5.89□□□□□ -1.47
TRIM55-204ENST00000353317 C9orf153Q5TBE3 101 aa5.89□□□□□ -1.47
TRIM55-204ENST00000353317 LINC00846Q9NV44 126 aa5.89□□□□□ -1.47
TRIM55-204ENST00000353317 KLK5Q9Y337 293 aaPredicted RBP5.89□□□□□ -1.47
TRIM55-204ENST00000353317 LYRM9A8MSI8 78 aa5.88□□□□□ -1.47
TRIM55-204ENST00000353317 NCR3O14931 201 aa5.88□□□□□ -1.47
TRIM55-204ENST00000353317 HIST1H4AP62805 103 aaKnown RBP5.88□□□□□ -1.47
TRIM55-204ENST00000353317 MEGF8Q7Z7M0 2845 aa5.88□□□□□ -1.47
TRIM55-204ENST00000353317 A0A096LPF7 62 aa5.88□□□□□ -1.47
TRIM55-204ENST00000353317 SS18Q15532 418 aa5.87□□□□□ -1.47
TRIM55-204ENST00000353317 LINC00526Q96FQ7 95 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms