RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 DEFB135Q30KP9 77 aa14.89□□□□□ -0.03
PTPN18-202ENST00000347849 LINC00643Q86TS7 51 aa14.89□□□□□ -0.03
PTPN18-202ENST00000347849 WFDC9Q8NEX5 89 aa14.89□□□□□ -0.03
PTPN18-202ENST00000347849 UBE2L6O14933 153 aa14.87□□□□□ -0.03
PTPN18-202ENST00000347849 KRTAP24-1Q3LI83 254 aa14.87□□□□□ -0.03
PTPN18-202ENST00000347849 TRBV6-4A0A1B0GX49 114 aa14.87□□□□□ -0.03
PTPN18-202ENST00000347849 TOMM7Q9P0U1 55 aa14.86□□□□□ -0.03
PTPN18-202ENST00000347849 GAGE2AQ6NT46 116 aa14.85□□□□□ -0.03
PTPN18-202ENST00000347849 MIR7-3HGQ8N6C7 128 aa14.85□□□□□ -0.03
PTPN18-202ENST00000347849 STAB1Q9NY15 2570 aa14.85□□□□□ -0.03
PTPN18-202ENST00000347849 PKD1L1Q8TDX9 2849 aa14.85□□□□□ -0.03
PTPN18-202ENST00000347849 IGKV3OR2-268A0A0C4DH90 116 aa14.85□□□□□ -0.03
PTPN18-202ENST00000347849 TRAV13-2A0A0B4J235 113 aa14.84□□□□□ -0.03
PTPN18-202ENST00000347849 LINC00337Q8N6G1 96 aa14.84□□□□□ -0.03
PTPN18-202ENST00000347849 LINC00612Q8N6U2 182 aa14.84□□□□□ -0.03
PTPN18-202ENST00000347849 TMEM243Q9BU79 118 aa14.84□□□□□ -0.03
PTPN18-202ENST00000347849 CRPP02741 224 aa14.83□□□□□ -0.04
PTPN18-202ENST00000347849 MALP21145 153 aa14.83□□□□□ -0.04
PTPN18-202ENST00000347849 RPL28P46779 137 aaKnown RBP14.83□□□□□ -0.04
PTPN18-202ENST00000347849 KIR2DL5BQ8NHK3 375 aa14.83□□□□□ -0.04
PTPN18-202ENST00000347849 OXLD1Q5BKU9 147 aa14.83□□□□□ -0.04
PTPN18-202ENST00000347849 SND1-IT1Q9HBX3 110 aa14.83□□□□□ -0.04
PTPN18-202ENST00000347849 IGKV2-28A0A075B6P5 120 aa14.82□□□□□ -0.04
PTPN18-202ENST00000347849 IGKV2D-28P01615 120 aa14.82□□□□□ -0.04
PTPN18-202ENST00000347849 FAM222AQ5U5X8 452 aa14.82□□□□□ -0.04
PTPN18-202ENST00000347849 COX7B2Q8TF08 81 aa14.82□□□□□ -0.04
PTPN18-202ENST00000347849 SDIM1Q6ZPB5 146 aa14.82□□□□□ -0.04
PTPN18-202ENST00000347849 INAFM2P0DMQ5 153 aa14.81□□□□□ -0.04
PTPN18-202ENST00000347849 LINC00158P58513 81 aa14.8□□□□□ -0.04
PTPN18-202ENST00000347849 IGHV4-30-4P0DP06 118 aa14.8□□□□□ -0.04
PTPN18-202ENST00000347849 ANK2Q01484 3957 aa14.79□□□□□ -0.04
PTPN18-202ENST00000347849 CMYA5Q8N3K9 4069 aa14.79□□□□□ -0.04
PTPN18-202ENST00000347849 A0A087WYN8 130 aa14.78□□□□□ -0.04
PTPN18-202ENST00000347849 SMIM9A6NGZ8 99 aa14.78□□□□□ -0.04
PTPN18-202ENST00000347849 SMIM11BQ8TCY0 68 aa14.78□□□□□ -0.04
PTPN18-202ENST00000347849 BAHCC1Q9P281 2608 aa14.78□□□□□ -0.04
PTPN18-202ENST00000347849 IGHV4-28A0A0C4DH34 117 aa14.78□□□□□ -0.04
PTPN18-202ENST00000347849 WIPF1O43516 503 aa14.78□□□□□ -0.04
PTPN18-202ENST00000347849 TMEM126AQ9H061 195 aa14.78□□□□□ -0.04
PTPN18-202ENST00000347849 PPDPFQ9H3Y8 114 aa14.78□□□□□ -0.04
PTPN18-202ENST00000347849 DNAL4O96015 105 aa14.77□□□□□ -0.05
PTPN18-202ENST00000347849 APOC4P55056 127 aa14.77□□□□□ -0.05
PTPN18-202ENST00000347849 C9orf129Q5T035 196 aaKnown RBP14.77□□□□□ -0.05
PTPN18-202ENST00000347849 C9orf153Q5TBE3 101 aa14.76□□□□□ -0.05
PTPN18-202ENST00000347849 C3orf22Q8N5N4 141 aa14.76□□□□□ -0.05
PTPN18-202ENST00000347849 ATP5G1P05496 136 aa14.75□□□□□ -0.05
PTPN18-202ENST00000347849 GYPEP15421 78 aa14.75□□□□□ -0.05
PTPN18-202ENST00000347849 KRTAP10-11P60412 298 aa14.75□□□□□ -0.05
PTPN18-202ENST00000347849 C5orf38Q86SI9 138 aa14.75□□□□□ -0.05
PTPN18-202ENST00000347849 CELA1Q9UNI1 258 aa14.75□□□□□ -0.05
PTPN18-202ENST00000347849 A0A096LPF7 62 aa14.75□□□□□ -0.05
PTPN18-202ENST00000347849 CCL18P55774 89 aa14.75□□□□□ -0.05
PTPN18-202ENST00000347849 IGLV4-60A0A075B6I1 120 aa14.74□□□□□ -0.05
PTPN18-202ENST00000347849 TRBV6-8A0A0A6YYG3 113 aa14.74□□□□□ -0.05
PTPN18-202ENST00000347849 PFN2P35080 140 aa14.74□□□□□ -0.05
PTPN18-202ENST00000347849 MAST4O15021 2626 aa14.74□□□□□ -0.05
PTPN18-202ENST00000347849 CXCL5P42830 114 aa14.74□□□□□ -0.05
PTPN18-202ENST00000347849 Q8NAQ8 132 aa14.74□□□□□ -0.05
PTPN18-202ENST00000347849 C14orf132Q9NPU4 83 aa14.74□□□□□ -0.05
PTPN18-202ENST00000347849 UQCRQO14949 82 aa14.72□□□□□ -0.05
PTPN18-202ENST00000347849 IGHV3OR16-9A0A0B4J2B5 98 aa14.7□□□□□ -0.06
PTPN18-202ENST00000347849 LYRM9A8MSI8 78 aa14.7□□□□□ -0.06
PTPN18-202ENST00000347849 PAX4O43316 350 aa14.7□□□□□ -0.06
PTPN18-202ENST00000347849 OR13C6PQ8NH95 151 aa14.7□□□□□ -0.06
PTPN18-202ENST00000347849 PRO0255Q9UI72 69 aa14.7□□□□□ -0.06
PTPN18-202ENST00000347849 H0YGX0 51 aa14.69□□□□□ -0.06
PTPN18-202ENST00000347849 LECT2O14960 151 aa14.69□□□□□ -0.06
PTPN18-202ENST00000347849 LINC00526Q96FQ7 95 aa14.68□□□□□ -0.06
PTPN18-202ENST00000347849 IBA57-AS1B1ANH7 110 aa14.67□□□□□ -0.06
PTPN18-202ENST00000347849 SLPIP03973 132 aa14.67□□□□□ -0.06
PTPN18-202ENST00000347849 C11orf68Q9H3H3 251 aaKnown RBP14.67□□□□□ -0.06
PTPN18-202ENST00000347849 DAD1P61803 113 aa14.66□□□□□ -0.06
PTPN18-202ENST00000347849 COL6A5A8TX70 2615 aa14.66□□□□□ -0.06
PTPN18-202ENST00000347849 IGKV3D-7A0A0C4DH55 119 aa14.66□□□□□ -0.06
PTPN18-202ENST00000347849 RETNQ9HD89 108 aa14.66□□□□□ -0.06
PTPN18-202ENST00000347849 A0A087WZ39 114 aa14.65□□□□□ -0.06
PTPN18-202ENST00000347849 NCR3O14931 201 aa14.65□□□□□ -0.06
PTPN18-202ENST00000347849 MIFP14174 115 aa14.65□□□□□ -0.06
PTPN18-202ENST00000347849 LINC00846Q9NV44 126 aa14.65□□□□□ -0.06
PTPN18-202ENST00000347849 COX7CP15954 63 aa14.65□□□□□ -0.06
PTPN18-202ENST00000347849 KLK5Q9Y337 293 aaPredicted RBP14.64□□□□□ -0.07
PTPN18-202ENST00000347849 C6orf226Q5I0X4 101 aa14.64□□□□□ -0.07
PTPN18-202ENST00000347849 C2orf48Q96LS8 159 aa14.63□□□□□ -0.07
PTPN18-202ENST00000347849 OBSCN-AS1Q96MR7 158 aa14.63□□□□□ -0.07
PTPN18-202ENST00000347849 HTN3P15516 51 aa14.62□□□□□ -0.07
PTPN18-202ENST00000347849 HIST1H4AP62805 103 aaKnown RBP14.61□□□□□ -0.07
PTPN18-202ENST00000347849 Q8N3U1 123 aa14.61□□□□□ -0.07
PTPN18-202ENST00000347849 LINC00959A0A1B0GUT2 108 aa14.6□□□□□ -0.07
PTPN18-202ENST00000347849 ATOX1O00244 68 aa14.59□□□□□ -0.07
PTPN18-202ENST00000347849 SPART-AS1P0CW21 52 aa14.59□□□□□ -0.07
PTPN18-202ENST00000347849 NOTCH1P46531 2555 aa14.59□□□□□ -0.07
PTPN18-202ENST00000347849 XCL1P47992 114 aa14.58□□□□□ -0.07
PTPN18-202ENST00000347849 EGFEM1PQ0D2K5 195 aa14.58□□□□□ -0.07
PTPN18-202ENST00000347849 TENM3Q9P273 2699 aa14.58□□□□□ -0.08
PTPN18-202ENST00000347849 DNAH3Q8TD57 4116 aa14.57□□□□□ -0.08
PTPN18-202ENST00000347849 A0A087WVE0 104 aa14.57□□□□□ -0.08
PTPN18-202ENST00000347849 CLPSL2Q6UWE3 100 aa14.57□□□□□ -0.08
PTPN18-202ENST00000347849 ORMDL1Q9P0S3 153 aa14.56□□□□□ -0.08
PTPN18-202ENST00000347849 A0A1B0GX51 115 aa14.56□□□□□ -0.08
PTPN18-202ENST00000347849 RPL18AQ02543 176 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms