RNA–Protein interactions for RNA: ENST00000347055.3

KRCC1-201, Transcript of lysine rich coiled-coil 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRCC1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1-201ENST00000347055 Q6ZQT0 140 aa12.52□□□□□ -0.41
KRCC1-201ENST00000347055 GYPEP15421 78 aa12.51□□□□□ -0.41
KRCC1-201ENST00000347055 RBM3P98179 157 aaKnown RBP12.51□□□□□ -0.41
KRCC1-201ENST00000347055 C11orf68Q9H3H3 251 aaKnown RBP12.51□□□□□ -0.41
KRCC1-201ENST00000347055 C16orf95Q9H693 158 aa12.51□□□□□ -0.41
KRCC1-201ENST00000347055 ENHOQ6UWT2 76 aa12.51□□□□□ -0.41
KRCC1-201ENST00000347055 PRO0255Q9UI72 69 aa12.51□□□□□ -0.41
KRCC1-201ENST00000347055 TRAV7A0A075B6U4 112 aa12.5□□□□□ -0.41
KRCC1-201ENST00000347055 C9orf66Q5T8R8 295 aa12.49□□□□□ -0.41
KRCC1-201ENST00000347055 HILS1P60008 231 aa12.48□□□□□ -0.41
KRCC1-201ENST00000347055 C6orf99Q4VX62 202 aa12.48□□□□□ -0.41
KRCC1-201ENST00000347055 TRAV23DV6A0A075B6W5 121 aa12.48□□□□□ -0.41
KRCC1-201ENST00000347055 DSCR8Q96T75 97 aa12.48□□□□□ -0.41
KRCC1-201ENST00000347055 ITPR1Q14643 2758 aa12.47□□□□□ -0.41
KRCC1-201ENST00000347055 CXCL6P80162 114 aa12.47□□□□□ -0.41
KRCC1-201ENST00000347055 FAM19A1Q7Z5A9 133 aa12.47□□□□□ -0.41
KRCC1-201ENST00000347055 LINC00482Q8N8I6 264 aa12.46□□□□□ -0.41
KRCC1-201ENST00000347055 WFDC10AQ9H1F0 79 aa12.46□□□□□ -0.41
KRCC1-201ENST00000347055 CRYBG3Q68DQ2 2970 aa12.46□□□□□ -0.42
KRCC1-201ENST00000347055 FAM236DA0A1B0GTK5 79 aa12.45□□□□□ -0.42
KRCC1-201ENST00000347055 EPM2AB3EWF7 344 aa12.45□□□□□ -0.42
KRCC1-201ENST00000347055 FAM236CP0DP71 79 aa12.45□□□□□ -0.42
KRCC1-201ENST00000347055 CHCHD10Q8WYQ3 142 aaPredicted RBP12.45□□□□□ -0.42
KRCC1-201ENST00000347055 OXTP01178 125 aa12.44□□□□□ -0.42
KRCC1-201ENST00000347055 LYRM9A8MSI8 78 aa12.43□□□□□ -0.42
KRCC1-201ENST00000347055 IGLV6-57P01721 117 aa12.43□□□□□ -0.42
KRCC1-201ENST00000347055 DEFB130BP0DP73 79 aa12.43□□□□□ -0.42
KRCC1-201ENST00000347055 DEFB130AP0DP74 79 aa12.43□□□□□ -0.42
KRCC1-201ENST00000347055 PRR3P79522 188 aaKnown RBP12.43□□□□□ -0.42
KRCC1-201ENST00000347055 KLKP1Q107X0 134 aa12.43□□□□□ -0.42
KRCC1-201ENST00000347055 COL12A1Q99715 3063 aa12.43□□□□□ -0.42
KRCC1-201ENST00000347055 A0A0J9YWU9 116 aa12.43□□□□□ -0.42
KRCC1-201ENST00000347055 IGHV4-30-4P0DP06 118 aa12.43□□□□□ -0.42
KRCC1-201ENST00000347055 PLA2G2AP14555 144 aa12.42□□□□□ -0.42
KRCC1-201ENST00000347055 SERP1Q9Y6X1 66 aa12.42□□□□□ -0.42
KRCC1-201ENST00000347055 LINC01547P58512 204 aaPredicted RBP12.41□□□□□ -0.42
KRCC1-201ENST00000347055 Q5XG85 94 aa12.41□□□□□ -0.42
KRCC1-201ENST00000347055 C20orf197Q8N268 126 aa12.41□□□□□ -0.42
KRCC1-201ENST00000347055 LINC00269Q8N2A0 174 aa12.41□□□□□ -0.42
KRCC1-201ENST00000347055 SPG11Q96JI7 2443 aa12.41□□□□□ -0.42
KRCC1-201ENST00000347055 RNASE1P07998 156 aaKnown RBP12.41□□□□□ -0.42
KRCC1-201ENST00000347055 REG3AQ06141 175 aa12.41□□□□□ -0.42
KRCC1-201ENST00000347055 KRTAP1-3Q8IUG1 177 aa12.41□□□□□ -0.42
KRCC1-201ENST00000347055 WFDC9Q8NEX5 89 aa12.41□□□□□ -0.42
KRCC1-201ENST00000347055 LINC01006Q8NI28 216 aa12.41□□□□□ -0.42
KRCC1-201ENST00000347055 LAMTOR3Q9UHA4 124 aa12.41□□□□□ -0.42
KRCC1-201ENST00000347055 CELSR2Q9HCU4 2923 aa12.4□□□□□ -0.42
KRCC1-201ENST00000347055 GVQW2A0A096LPI5 108 aaPredicted RBP12.4□□□□□ -0.42
KRCC1-201ENST00000347055 ANKRD17O75179 2603 aaKnown RBP12.39□□□□□ -0.43
KRCC1-201ENST00000347055 Q6ZVQ6 151 aa12.39□□□□□ -0.43
KRCC1-201ENST00000347055 ESM1Q9NQ30 184 aa12.39□□□□□ -0.43
KRCC1-201ENST00000347055 TRBV7-6A0A0J9YX20 115 aa12.38□□□□□ -0.43
KRCC1-201ENST00000347055 NDUFC1O43677 76 aa12.38□□□□□ -0.43
KRCC1-201ENST00000347055 CLPSL2Q6UWE3 100 aa12.38□□□□□ -0.43
KRCC1-201ENST00000347055 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.38□□□□□ -0.43
KRCC1-201ENST00000347055 BBC3Q96PG8 261 aaPredicted RBP12.38□□□□□ -0.43
KRCC1-201ENST00000347055 X6R8D5 127 aa12.38□□□□□ -0.43
KRCC1-201ENST00000347055 H7BZZ5 65 aa12.37□□□□□ -0.43
KRCC1-201ENST00000347055 ATP5EP56381 51 aaPredicted RBP12.36□□□□□ -0.43
KRCC1-201ENST00000347055 MXRA5Q9NR99 2828 aa12.36□□□□□ -0.43
KRCC1-201ENST00000347055 ANGP03950 147 aaKnown RBP12.35□□□□□ -0.43
KRCC1-201ENST00000347055 KRTAP10-9P60411 292 aa12.35□□□□□ -0.43
KRCC1-201ENST00000347055 SPAG11BQ08648 103 aa12.35□□□□□ -0.43
KRCC1-201ENST00000347055 Q8NDZ9 215 aa12.35□□□□□ -0.43
KRCC1-201ENST00000347055 DIRC1Q969H9 104 aa12.34□□□□□ -0.43
KRCC1-201ENST00000347055 TRBV7-4A0A0J9YYF1 115 aa12.33□□□□□ -0.44
KRCC1-201ENST00000347055 C9orf116Q5BN46 136 aaPredicted RBP12.33□□□□□ -0.44
KRCC1-201ENST00000347055 Q6ZQY7 126 aa12.33□□□□□ -0.44
KRCC1-201ENST00000347055 HAMPP81172 84 aa12.31□□□□□ -0.44
KRCC1-201ENST00000347055 NCOR2Q9Y618 2525 aa12.31□□□□□ -0.44
KRCC1-201ENST00000347055 ERC2-IT1O76042 136 aa12.3□□□□□ -0.44
KRCC1-201ENST00000347055 MRAPQ8TCY5 172 aa12.3□□□□□ -0.44
KRCC1-201ENST00000347055 C4orf26Q17RF5 130 aa12.3□□□□□ -0.44
KRCC1-201ENST00000347055 USP9XQ93008 2570 aaPredicted RBP12.29□□□□□ -0.44
KRCC1-201ENST00000347055 LELP1Q5T871 98 aa12.29□□□□□ -0.44
KRCC1-201ENST00000347055 UNQ6190/PRO20217Q6UXQ8 127 aa12.29□□□□□ -0.44
KRCC1-201ENST00000347055 PRR34Q9NV39 138 aa12.29□□□□□ -0.44
KRCC1-201ENST00000347055 IGLV10-54A0A075B6I4 117 aa12.28□□□□□ -0.44
KRCC1-201ENST00000347055 CYSRT1A8MQ03 144 aa12.28□□□□□ -0.44
KRCC1-201ENST00000347055 SPATA3Q8NHX4 192 aa12.28□□□□□ -0.44
KRCC1-201ENST00000347055 USP9YO00507 2555 aaPredicted RBP12.28□□□□□ -0.44
KRCC1-201ENST00000347055 COX7BP24311 80 aa12.28□□□□□ -0.44
KRCC1-201ENST00000347055 ZNF843Q8N446 348 aa12.28□□□□□ -0.44
KRCC1-201ENST00000347055 ELOF1P60002 83 aaKnown RBP12.27□□□□□ -0.45
KRCC1-201ENST00000347055 C10orf25Q5T742 122 aa12.27□□□□□ -0.45
KRCC1-201ENST00000347055 CHD8Q9HCK8 2581 aa12.26□□□□□ -0.45
KRCC1-201ENST00000347055 PKD1L2Q7Z442 2459 aa12.26□□□□□ -0.45
KRCC1-201ENST00000347055 A0A096LPF7 62 aa12.26□□□□□ -0.45
KRCC1-201ENST00000347055 AKAP9Q99996 3911 aa12.26□□□□□ -0.45
KRCC1-201ENST00000347055 ZANQ9Y493 2812 aa12.26□□□□□ -0.45
KRCC1-201ENST00000347055 M0R2N4 97 aa12.25□□□□□ -0.45
KRCC1-201ENST00000347055 ZNF73O43830 326 aaPredicted RBP12.25□□□□□ -0.45
KRCC1-201ENST00000347055 HRCT1Q6UXD1 115 aa12.25□□□□□ -0.45
KRCC1-201ENST00000347055 CFAP46Q8IYW2 2715 aa12.25□□□□□ -0.45
KRCC1-201ENST00000347055 SMIM26A0A096LP01 95 aa12.25□□□□□ -0.45
KRCC1-201ENST00000347055 TRAV10A0A0B4J240 114 aa12.25□□□□□ -0.45
KRCC1-201ENST00000347055 Q8N3U1 123 aa12.25□□□□□ -0.45
KRCC1-201ENST00000347055 CHD6Q8TD26 2715 aa12.24□□□□□ -0.45
KRCC1-201ENST00000347055 NOTCH3Q9UM47 2321 aa12.24□□□□□ -0.45
KRCC1-201ENST00000347055 MYO9AB2RTY4 2548 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms