RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 DEFB4AO15263 64 aa3.39□□□□□ -1.87
CSMD3-203ENST00000343508 ZNF843Q8N446 348 aa3.39□□□□□ -1.87
CSMD3-203ENST00000343508 IGHV3OR16-9A0A0B4J2B5 98 aa3.39□□□□□ -1.87
CSMD3-203ENST00000343508 HILS1P60008 231 aa3.39□□□□□ -1.87
CSMD3-203ENST00000343508 FAM218AQ96MZ4 157 aa3.39□□□□□ -1.87
CSMD3-203ENST00000343508 LOC110117498A0A087WWA1 95 aa3.38□□□□□ -1.87
CSMD3-203ENST00000343508 UBE2AP49459 152 aa3.38□□□□□ -1.87
CSMD3-203ENST00000343508 SMCR5Q8TEV8 140 aa3.38□□□□□ -1.87
CSMD3-203ENST00000343508 LINC01600Q96MT4 127 aa3.38□□□□□ -1.87
CSMD3-203ENST00000343508 A6NED7 52 aa3.38□□□□□ -1.87
CSMD3-203ENST00000343508 TRANK1O15050 2925 aa3.38□□□□□ -1.87
CSMD3-203ENST00000343508 ESRGQ1W209 222 aa3.38□□□□□ -1.87
CSMD3-203ENST00000343508 B9D2Q9BPU9 175 aa3.38□□□□□ -1.87
CSMD3-203ENST00000343508 PRR15LQ9BU68 103 aa3.38□□□□□ -1.87
CSMD3-203ENST00000343508 SOSTDC1Q6X4U4 206 aa3.37□□□□□ -1.87
CSMD3-203ENST00000343508 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.37□□□□□ -1.87
CSMD3-203ENST00000343508 PMAIP1Q13794 54 aa3.37□□□□□ -1.87
CSMD3-203ENST00000343508 IGLV1-51P01701 117 aa3.37□□□□□ -1.87
CSMD3-203ENST00000343508 EGFEM1PQ0D2K5 195 aa3.37□□□□□ -1.87
CSMD3-203ENST00000343508 Q6ZQT0 140 aa3.37□□□□□ -1.87
CSMD3-203ENST00000343508 AVPP01185 164 aa3.37□□□□□ -1.87
CSMD3-203ENST00000343508 UNQ6190/PRO20217Q6UXQ8 127 aa3.37□□□□□ -1.87
CSMD3-203ENST00000343508 IGKV4-1P06312 121 aa3.37□□□□□ -1.87
CSMD3-203ENST00000343508 C9orf116Q5BN46 136 aaPredicted RBP3.37□□□□□ -1.87
CSMD3-203ENST00000343508 SYCNQ0VAF6 134 aa3.36□□□□□ -1.87
CSMD3-203ENST00000343508 EP300Q09472 2414 aaPredicted RBP3.36□□□□□ -1.87
CSMD3-203ENST00000343508 C11orf45Q8TAV5 145 aa3.36□□□□□ -1.87
CSMD3-203ENST00000343508 KLKP1Q107X0 134 aa3.36□□□□□ -1.87
CSMD3-203ENST00000343508 LINC01006Q8NI28 216 aa3.36□□□□□ -1.87
CSMD3-203ENST00000343508 WFDC10AQ9H1F0 79 aa3.36□□□□□ -1.87
CSMD3-203ENST00000343508 hDV103S1A0JD37 113 aa3.36□□□□□ -1.87
CSMD3-203ENST00000343508 C14orf177Q52M58 125 aa3.36□□□□□ -1.87
CSMD3-203ENST00000343508 CACNA1HO95180 2353 aa3.36□□□□□ -1.87
CSMD3-203ENST00000343508 SEC61GP60059 68 aa3.36□□□□□ -1.87
CSMD3-203ENST00000343508 C1orf137Q5JT78 98 aa3.36□□□□□ -1.87
CSMD3-203ENST00000343508 LINC00482Q8N8I6 264 aa3.35□□□□□ -1.87
CSMD3-203ENST00000343508 SPTBN2O15020 2390 aa3.35□□□□□ -1.87
CSMD3-203ENST00000343508 WDFY4Q6ZS81 3184 aa3.35□□□□□ -1.87
CSMD3-203ENST00000343508 DMDP11532 3685 aa3.35□□□□□ -1.87
CSMD3-203ENST00000343508 ELOF1P60002 83 aaKnown RBP3.35□□□□□ -1.87
CSMD3-203ENST00000343508 HIGD2AQ9BW72 106 aa3.35□□□□□ -1.87
CSMD3-203ENST00000343508 SPTAN1Q13813 2472 aaKnown RBP3.35□□□□□ -1.87
CSMD3-203ENST00000343508 A0A1W2PPR1 153 aa3.34□□□□□ -1.87
CSMD3-203ENST00000343508 A8MTW9 85 aa3.34□□□□□ -1.87
CSMD3-203ENST00000343508 C10orf25Q5T742 122 aa3.34□□□□□ -1.87
CSMD3-203ENST00000343508 ZNF575Q86XF7 245 aa3.34□□□□□ -1.87
CSMD3-203ENST00000343508 DEFB131BA0A096LNP1 70 aa3.34□□□□□ -1.87
CSMD3-203ENST00000343508 ERC2-IT1O76042 136 aa3.34□□□□□ -1.87
CSMD3-203ENST00000343508 LY6G6DO95868 133 aa3.34□□□□□ -1.87
CSMD3-203ENST00000343508 LIMD2Q9BT23 127 aa3.34□□□□□ -1.87
CSMD3-203ENST00000343508 SPATA3Q8NHX4 192 aa3.34□□□□□ -1.88
CSMD3-203ENST00000343508 RELNP78509 3460 aa3.34□□□□□ -1.88
CSMD3-203ENST00000343508 LRCOL1A6NCL2 159 aa3.34□□□□□ -1.88
CSMD3-203ENST00000343508 CELA1Q9UNI1 258 aa3.34□□□□□ -1.88
CSMD3-203ENST00000343508 KPRPQ5T749 579 aaPredicted RBP3.34□□□□□ -1.88
CSMD3-203ENST00000343508 REG3GQ6UW15 175 aa3.34□□□□□ -1.88
CSMD3-203ENST00000343508 PLAC8L1A1L4L8 177 aa3.34□□□□□ -1.88
CSMD3-203ENST00000343508 C6orf223Q8N319 242 aa3.34□□□□□ -1.88
CSMD3-203ENST00000343508 HCG22E2RYF7 251 aa3.33□□□□□ -1.88
CSMD3-203ENST00000343508 DOPEY2Q9Y3R5 2298 aa3.33□□□□□ -1.88
CSMD3-203ENST00000343508 RPL37AP8A6NKH3 93 aa3.33□□□□□ -1.88
CSMD3-203ENST00000343508 PSPHP1O15172 72 aa3.33□□□□□ -1.88
CSMD3-203ENST00000343508 LINC00208Q96KT6 92 aa3.33□□□□□ -1.88
CSMD3-203ENST00000343508 C2orf48Q96LS8 159 aa3.33□□□□□ -1.88
CSMD3-203ENST00000343508 ANKHD1Q8IWZ3 2542 aaKnown RBP3.33□□□□□ -1.88
CSMD3-203ENST00000343508 C16orf95Q9H693 158 aa3.33□□□□□ -1.88
CSMD3-203ENST00000343508 Q9UF83 564 aa3.33□□□□□ -1.88
CSMD3-203ENST00000343508 SORL1Q92673 2214 aa3.32□□□□□ -1.88
CSMD3-203ENST00000343508 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.32□□□□□ -1.88
CSMD3-203ENST00000343508 IGKV2-24A0A0C4DH68 120 aa3.32□□□□□ -1.88
CSMD3-203ENST00000343508 LINC00474Q9P2X8 69 aa3.32□□□□□ -1.88
CSMD3-203ENST00000343508 J3QKU1 62 aa3.32□□□□□ -1.88
CSMD3-203ENST00000343508 IGLV6-57P01721 117 aa3.32□□□□□ -1.88
CSMD3-203ENST00000343508 A0A0J9YWU9 116 aa3.32□□□□□ -1.88
CSMD3-203ENST00000343508 IGHV4-30-4P0DP06 118 aa3.32□□□□□ -1.88
CSMD3-203ENST00000343508 CHD9Q3L8U1 2897 aa3.31□□□□□ -1.88
CSMD3-203ENST00000343508 TM2D3Q9BRN9 247 aa3.31□□□□□ -1.88
CSMD3-203ENST00000343508 WIPF1O43516 503 aa3.31□□□□□ -1.88
CSMD3-203ENST00000343508 SMIM29Q86T20 159 aa3.31□□□□□ -1.88
CSMD3-203ENST00000343508 WFDC13Q8IUB5 93 aa3.31□□□□□ -1.88
CSMD3-203ENST00000343508 Q8N9L7 120 aa3.31□□□□□ -1.88
CSMD3-203ENST00000343508 ZNF706Q9Y5V0 76 aaPredicted RBP3.31□□□□□ -1.88
CSMD3-203ENST00000343508 WNK1Q9H4A3 2382 aa3.31□□□□□ -1.88
CSMD3-203ENST00000343508 H0Y9P7 68 aa3.31□□□□□ -1.88
CSMD3-203ENST00000343508 CASC2Q6XLA1 102 aa3.31□□□□□ -1.88
CSMD3-203ENST00000343508 GPR179Q6PRD1 2367 aa3.31□□□□□ -1.88
CSMD3-203ENST00000343508 FRYLO94915 3013 aa3.31□□□□□ -1.88
CSMD3-203ENST00000343508 LINC00167Q96N53 147 aa3.31□□□□□ -1.88
CSMD3-203ENST00000343508 GVQW2A0A096LPI5 108 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-203ENST00000343508 EIF4EBP3O60516 100 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-203ENST00000343508 LYPD5Q6UWN5 251 aa3.3□□□□□ -1.88
CSMD3-203ENST00000343508 PRR4Q16378 134 aa3.3□□□□□ -1.88
CSMD3-203ENST00000343508 LOC400499M0QZD8 3231 aa3.3□□□□□ -1.88
CSMD3-203ENST00000343508 H7BZZ5 65 aa3.3□□□□□ -1.88
CSMD3-203ENST00000343508 TRAV10A0A0B4J240 114 aa3.29□□□□□ -1.88
CSMD3-203ENST00000343508 H3BPC8 53 aa3.29□□□□□ -1.88
CSMD3-203ENST00000343508 IL17DQ8TAD2 202 aa3.29□□□□□ -1.88
CSMD3-203ENST00000343508 Q6ZRU5 148 aa3.29□□□□□ -1.88
CSMD3-203ENST00000343508 H3BNG1 76 aa3.29□□□□□ -1.88
CSMD3-203ENST00000343508 CSMD1Q96PZ7 3565 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms