RNA–Protein interactions for RNA: ENST00000343217.6

DUSP28-201, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DUSP28, Length 1,555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-201ENST00000343217 M0R2N4 97 aa13.92□□□□□ -0.18
DUSP28-201ENST00000343217 RTL8CO15255 209 aa13.92□□□□□ -0.18
DUSP28-201ENST00000343217 PRSS2P07478 247 aa13.92□□□□□ -0.18
DUSP28-201ENST00000343217 Q6ZR54 194 aa13.92□□□□□ -0.18
DUSP28-201ENST00000343217 ZNF625Q96I27 306 aaPredicted RBP13.92□□□□□ -0.18
DUSP28-201ENST00000343217 IGKV2D-24A0A075B6R9 120 aa13.91□□□□□ -0.18
DUSP28-201ENST00000343217 C6orf226Q5I0X4 101 aa13.91□□□□□ -0.18
DUSP28-201ENST00000343217 KRTAP26-1Q6PEX3 210 aa13.91□□□□□ -0.18
DUSP28-201ENST00000343217 ORAOV1Q8WV07 137 aa13.91□□□□□ -0.18
DUSP28-201ENST00000343217 TMEM238C9JI98 176 aa13.9□□□□□ -0.18
DUSP28-201ENST00000343217 SPANXB1Q9NS25 103 aaPredicted RBP13.9□□□□□ -0.18
DUSP28-201ENST00000343217 PKD1P98161 4303 aa13.9□□□□□ -0.18
DUSP28-201ENST00000343217 CXCL5P42830 114 aa13.89□□□□□ -0.19
DUSP28-201ENST00000343217 HIST1H4GQ99525 98 aa13.89□□□□□ -0.19
DUSP28-201ENST00000343217 Q9HAA7 133 aa13.89□□□□□ -0.19
DUSP28-201ENST00000343217 HINT1P49773 126 aaPredicted RBP13.88□□□□□ -0.19
DUSP28-201ENST00000343217 COX11Q9Y6N1 276 aa13.88□□□□□ -0.19
DUSP28-201ENST00000343217 TIMM17BO60830 172 aa13.88□□□□□ -0.19
DUSP28-201ENST00000343217 SRSF9Q13242 221 aaKnown RBP eCLIP13.88□□□□□ -0.19
DUSP28-201ENST00000343217 CIRBPQ14011 172 aaKnown RBP13.88□□□□□ -0.19
DUSP28-201ENST00000343217 CFAP161Q6P656 301 aa13.88□□□□□ -0.19
DUSP28-201ENST00000343217 SNHG12Q9BXW3 62 aa13.88□□□□□ -0.19
DUSP28-201ENST00000343217 TTC32Q5I0X7 151 aa13.87□□□□□ -0.19
DUSP28-201ENST00000343217 DNAH11Q96DT5 4516 aa13.86□□□□□ -0.19
DUSP28-201ENST00000343217 KIAA0087Q14695 138 aa13.86□□□□□ -0.19
DUSP28-201ENST00000343217 BVES-AS1Q5T3Y7 98 aa13.86□□□□□ -0.19
DUSP28-201ENST00000343217 KIAA1109Q2LD37 5005 aa13.86□□□□□ -0.19
DUSP28-201ENST00000343217 DYNC1H1Q14204 4646 aaKnown RBP13.85□□□□□ -0.19
DUSP28-201ENST00000343217 CKS1BP61024 79 aa13.85□□□□□ -0.19
DUSP28-201ENST00000343217 BATFQ16520 125 aa13.84□□□□□ -0.19
DUSP28-201ENST00000343217 Q6ZVH6 145 aa13.84□□□□□ -0.19
DUSP28-201ENST00000343217 CEND1Q8N111 149 aa13.84□□□□□ -0.19
DUSP28-201ENST00000343217 TM2D2Q9BX73 214 aa13.84□□□□□ -0.19
DUSP28-201ENST00000343217 EREGO14944 169 aa13.83□□□□□ -0.19
DUSP28-201ENST00000343217 SPAG11BQ08648 103 aa13.83□□□□□ -0.19
DUSP28-201ENST00000343217 LBHQ53QV2 105 aaPredicted RBP13.83□□□□□ -0.19
DUSP28-201ENST00000343217 GCSHP23434 173 aa13.83□□□□□ -0.2
DUSP28-201ENST00000343217 MEIG1Q5JSS6 88 aa13.83□□□□□ -0.2
DUSP28-201ENST00000343217 LITAFQ99732 161 aa13.83□□□□□ -0.2
DUSP28-201ENST00000343217 SPANXDQ9BXN6 97 aa13.82□□□□□ -0.2
DUSP28-201ENST00000343217 SPANXCQ9NY87 97 aa13.82□□□□□ -0.2
DUSP28-201ENST00000343217 NBDYA0A0U1RRE5 68 aa13.8□□□□□ -0.2
DUSP28-201ENST00000343217 KRTAP1-5Q9BYS1 174 aa13.8□□□□□ -0.2
DUSP28-201ENST00000343217 ZNF561-AS1K7EIQ3 104 aa13.79□□□□□ -0.2
DUSP28-201ENST00000343217 KRTAP17-1Q9BYP8 105 aa13.79□□□□□ -0.2
DUSP28-201ENST00000343217 C1orf134Q5TEV5 83 aa13.79□□□□□ -0.2
DUSP28-201ENST00000343217 C15orf56Q8N910 161 aa13.79□□□□□ -0.2
DUSP28-201ENST00000343217 TMEM238LA0A1B0GVL6 79 aa13.78□□□□□ -0.2
DUSP28-201ENST00000343217 A6NDN8 102 aa13.78□□□□□ -0.2
DUSP28-201ENST00000343217 A6NJY4 79 aa13.78□□□□□ -0.2
DUSP28-201ENST00000343217 F8WDY8 70 aa13.78□□□□□ -0.2
DUSP28-201ENST00000343217 PTTG1IPP53801 180 aa13.78□□□□□ -0.2
DUSP28-201ENST00000343217 C2orf82Q6UX34 121 aa13.78□□□□□ -0.2
DUSP28-201ENST00000343217 COPS9Q8WXC6 57 aa13.78□□□□□ -0.2
DUSP28-201ENST00000343217 IFITM1P13164 125 aa13.77□□□□□ -0.21
DUSP28-201ENST00000343217 FXYD2P54710 66 aa13.77□□□□□ -0.21
DUSP28-201ENST00000343217 COL5A1-AS1Q5SY13 56 aa13.77□□□□□ -0.21
DUSP28-201ENST00000343217 ADAMTSL4-AS1Q5T5F5 129 aa13.77□□□□□ -0.21
DUSP28-201ENST00000343217 NTN5Q8WTR8 489 aaPredicted RBP13.77□□□□□ -0.21
DUSP28-201ENST00000343217 GVQW2A0A096LPI5 108 aaPredicted RBP13.76□□□□□ -0.21
DUSP28-201ENST00000343217 SMIM13P0DJ93 91 aa13.76□□□□□ -0.21
DUSP28-201ENST00000343217 C2orf48Q96LS8 159 aa13.76□□□□□ -0.21
DUSP28-201ENST00000343217 ERG28Q9UKR5 140 aa13.76□□□□□ -0.21
DUSP28-201ENST00000343217 RPL24P83731 157 aaKnown RBP13.75□□□□□ -0.21
DUSP28-201ENST00000343217 COX17Q14061 63 aa13.75□□□□□ -0.21
DUSP28-201ENST00000343217 C6orf223Q8N319 242 aa13.74□□□□□ -0.21
DUSP28-201ENST00000343217 LINC00158P58513 81 aa13.73□□□□□ -0.21
DUSP28-201ENST00000343217 HIGD2BQ4VC39 106 aa13.73□□□□□ -0.21
DUSP28-201ENST00000343217 MUSTN1Q8IVN3 82 aa13.73□□□□□ -0.21
DUSP28-201ENST00000343217 PPDPFQ9H3Y8 114 aa13.73□□□□□ -0.21
DUSP28-201ENST00000343217 A0A0U1RRA0 63 aa13.72□□□□□ -0.21
DUSP28-201ENST00000343217 LINC00526Q96FQ7 95 aa13.72□□□□□ -0.21
DUSP28-201ENST00000343217 CAMK2N2Q96S95 79 aa13.72□□□□□ -0.21
DUSP28-201ENST00000343217 UNQ6190/PRO20217Q6UXQ8 127 aa13.71□□□□□ -0.21
DUSP28-201ENST00000343217 TRBV30A0A0K0K1B3 111 aa13.71□□□□□ -0.22
DUSP28-201ENST00000343217 USP17L23D6RBM5 183 aa13.71□□□□□ -0.22
DUSP28-201ENST00000343217 PSCAO43653 123 aa13.71□□□□□ -0.22
DUSP28-201ENST00000343217 PFN2P35080 140 aa13.71□□□□□ -0.22
DUSP28-201ENST00000343217 DAND5Q8N907 189 aa13.71□□□□□ -0.22
DUSP28-201ENST00000343217 MIR7-3HGQ8N6C7 128 aa13.7□□□□□ -0.22
DUSP28-201ENST00000343217 LINC00308Q8TCZ7 52 aa13.7□□□□□ -0.22
DUSP28-201ENST00000343217 NHP2Q9NX24 153 aaKnown RBP13.7□□□□□ -0.22
DUSP28-201ENST00000343217 C10orf25Q5T742 122 aa13.69□□□□□ -0.22
DUSP28-201ENST00000343217 TNP2Q05952 138 aa13.68□□□□□ -0.22
DUSP28-201ENST00000343217 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.67□□□□□ -0.22
DUSP28-201ENST00000343217 A0A1B0GWB2 263 aa13.67□□□□□ -0.22
DUSP28-201ENST00000343217 A4D1N5 150 aa13.67□□□□□ -0.22
DUSP28-201ENST00000343217 NPC2P61916 151 aa13.66□□□□□ -0.22
DUSP28-201ENST00000343217 SYCNQ0VAF6 134 aa13.66□□□□□ -0.22
DUSP28-201ENST00000343217 C6orf48Q9UBA6 75 aa13.66□□□□□ -0.22
DUSP28-201ENST00000343217 C14orf177Q52M58 125 aa13.64□□□□□ -0.23
DUSP28-201ENST00000343217 C9orf116Q5BN46 136 aaPredicted RBP13.64□□□□□ -0.23
DUSP28-201ENST00000343217 Q6ZRU5 148 aa13.64□□□□□ -0.23
DUSP28-201ENST00000343217 LRP1BQ9NZR2 4599 aa13.64□□□□□ -0.23
DUSP28-201ENST00000343217 SOSTDC1Q6X4U4 206 aa13.63□□□□□ -0.23
DUSP28-201ENST00000343217 PCLOQ9Y6V0 5065 aa13.63□□□□□ -0.23
DUSP28-201ENST00000343217 RYR1P21817 5038 aa13.63□□□□□ -0.23
DUSP28-201ENST00000343217 RNF151Q2KHN1 245 aa13.62□□□□□ -0.23
DUSP28-201ENST00000343217 Q6ZRN7 208 aaPredicted RBP13.62□□□□□ -0.23
DUSP28-201ENST00000343217 A0A0B4J2C4 111 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms