RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.1□□□□□ -1.59
VCAN-202ENST00000342785 CCDC179H3BU77 68 aa5.1□□□□□ -1.59
VCAN-202ENST00000342785 PRR3P79522 188 aaKnown RBP5.1□□□□□ -1.59
VCAN-202ENST00000342785 ATP5EP2Q5VTU8 51 aa5.1□□□□□ -1.59
VCAN-202ENST00000342785 CDIP1Q9H305 208 aa5.1□□□□□ -1.59
VCAN-202ENST00000342785 HELZ2Q9BYK8 2649 aaKnown RBP5.1□□□□□ -1.59
VCAN-202ENST00000342785 IGHV4-30-4P0DP06 118 aa5.1□□□□□ -1.59
VCAN-202ENST00000342785 OXLD1Q5BKU9 147 aa5.1□□□□□ -1.59
VCAN-202ENST00000342785 Q6Q795 121 aa5.09□□□□□ -1.59
VCAN-202ENST00000342785 SCXQ7RTU7 201 aa5.09□□□□□ -1.59
VCAN-202ENST00000342785 BPY2O14599 106 aa5.09□□□□□ -1.59
VCAN-202ENST00000342785 HIGD2AQ9BW72 106 aa5.09□□□□□ -1.59
VCAN-202ENST00000342785 COX17Q14061 63 aa5.09□□□□□ -1.6
VCAN-202ENST00000342785 C3orf22Q8N5N4 141 aa5.09□□□□□ -1.6
VCAN-202ENST00000342785 LINC00337Q8N6G1 96 aa5.09□□□□□ -1.6
VCAN-202ENST00000342785 IGHV3OR16-9A0A0B4J2B5 98 aa5.08□□□□□ -1.6
VCAN-202ENST00000342785 C16orf95Q9H693 158 aa5.08□□□□□ -1.6
VCAN-202ENST00000342785 CCKP06307 115 aa5.08□□□□□ -1.6
VCAN-202ENST00000342785 A0A1B0GUV1 79 aa5.08□□□□□ -1.6
VCAN-202ENST00000342785 ZNF73O43830 326 aaPredicted RBP5.08□□□□□ -1.6
VCAN-202ENST00000342785 A0A087WYN8 130 aa5.07□□□□□ -1.6
VCAN-202ENST00000342785 IGKV2-28A0A075B6P5 120 aa5.07□□□□□ -1.6
VCAN-202ENST00000342785 IGKV2D-28P01615 120 aa5.07□□□□□ -1.6
VCAN-202ENST00000342785 SERP2Q8N6R1 65 aa5.07□□□□□ -1.6
VCAN-202ENST00000342785 SHISA2Q6UWI4 295 aa5.07□□□□□ -1.6
VCAN-202ENST00000342785 MUC7Q8TAX7 377 aa5.07□□□□□ -1.6
VCAN-202ENST00000342785 M0R378 163 aa5.07□□□□□ -1.6
VCAN-202ENST00000342785 IGLV5-45A0A087WSX0 123 aa5.06□□□□□ -1.6
VCAN-202ENST00000342785 TMEM258P61165 79 aa5.06□□□□□ -1.6
VCAN-202ENST00000342785 FHL3Q13643 280 aa5.06□□□□□ -1.6
VCAN-202ENST00000342785 M0QXV9 152 aa5.06□□□□□ -1.6
VCAN-202ENST00000342785 UBE2AP49459 152 aa5.06□□□□□ -1.6
VCAN-202ENST00000342785 COX7CP15954 63 aa5.06□□□□□ -1.6
VCAN-202ENST00000342785 CHD6Q8TD26 2715 aa5.06□□□□□ -1.6
VCAN-202ENST00000342785 NBEAQ8NFP9 2946 aa5.06□□□□□ -1.6
VCAN-202ENST00000342785 A0A087WVE0 104 aa5.06□□□□□ -1.6
VCAN-202ENST00000342785 TRBV10-3A0A0K0K1G6 114 aa5.05□□□□□ -1.6
VCAN-202ENST00000342785 FSHBP01225 129 aa5.05□□□□□ -1.6
VCAN-202ENST00000342785 Q6JHZ5 121 aa5.05□□□□□ -1.6
VCAN-202ENST00000342785 Q8N814 137 aa5.05□□□□□ -1.6
VCAN-202ENST00000342785 CDH23Q9H251 3354 aa5.05□□□□□ -1.6
VCAN-202ENST00000342785 SOSTDC1Q6X4U4 206 aa5.05□□□□□ -1.6
VCAN-202ENST00000342785 MP68P56378 58 aa5.05□□□□□ -1.6
VCAN-202ENST00000342785 EGFEM1PQ0D2K5 195 aa5.05□□□□□ -1.6
VCAN-202ENST00000342785 A0A096LNI7 61 aa5.04□□□□□ -1.6
VCAN-202ENST00000342785 FAM19A5Q7Z5A7 132 aaPredicted RBP5.04□□□□□ -1.6
VCAN-202ENST00000342785 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.04□□□□□ -1.6
VCAN-202ENST00000342785 WFDC9Q8NEX5 89 aa5.04□□□□□ -1.6
VCAN-202ENST00000342785 TRAV10A0A0B4J240 114 aa5.04□□□□□ -1.6
VCAN-202ENST00000342785 PKIGQ9Y2B9 76 aa5.04□□□□□ -1.6
VCAN-202ENST00000342785 C3orf84H3BNL1 204 aa5.04□□□□□ -1.6
VCAN-202ENST00000342785 NDUFB1O75438 58 aa5.04□□□□□ -1.6
VCAN-202ENST00000342785 RETNQ9HD89 108 aa5.04□□□□□ -1.6
VCAN-202ENST00000342785 NANOS2P60321 138 aaKnown RBP5.04□□□□□ -1.6
VCAN-202ENST00000342785 PRB2P02812 416 aaPredicted RBP5.03□□□□□ -1.6
VCAN-202ENST00000342785 STAB1Q9NY15 2570 aa5.03□□□□□ -1.6
VCAN-202ENST00000342785 NDUFC2O95298 119 aa5.03□□□□□ -1.6
VCAN-202ENST00000342785 Q6ZTC4 211 aa5.03□□□□□ -1.6
VCAN-202ENST00000342785 C6orf223Q8N319 242 aa5.03□□□□□ -1.6
VCAN-202ENST00000342785 FAM19A1Q7Z5A9 133 aa5.03□□□□□ -1.6
VCAN-202ENST00000342785 SBSPONQ8IVN8 264 aa5.03□□□□□ -1.6
VCAN-202ENST00000342785 TEP1Q99973 2627 aaKnown RBP5.02□□□□□ -1.61
VCAN-202ENST00000342785 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.02□□□□□ -1.61
VCAN-202ENST00000342785 NDUFS5O43920 106 aa5.02□□□□□ -1.61
VCAN-202ENST00000342785 LITAFQ99732 161 aa5.02□□□□□ -1.61
VCAN-202ENST00000342785 LINC00846Q9NV44 126 aa5.02□□□□□ -1.61
VCAN-202ENST00000342785 FRYQ5TBA9 3013 aa5.02□□□□□ -1.61
VCAN-202ENST00000342785 A0A0J9YWU9 116 aa5.02□□□□□ -1.61
VCAN-202ENST00000342785 A8MTW9 85 aa5.02□□□□□ -1.61
VCAN-202ENST00000342785 KLK5Q9Y337 293 aaPredicted RBP5.02□□□□□ -1.61
VCAN-202ENST00000342785 COL27A1Q8IZC6 1860 aaPredicted RBP5.02□□□□□ -1.61
VCAN-202ENST00000342785 RPL37AP8A6NKH3 93 aa5.01□□□□□ -1.61
VCAN-202ENST00000342785 FAM236DA0A1B0GTK5 79 aa5.01□□□□□ -1.61
VCAN-202ENST00000342785 FAM236CP0DP71 79 aa5.01□□□□□ -1.61
VCAN-202ENST00000342785 C14orf177Q52M58 125 aa5.01□□□□□ -1.61
VCAN-202ENST00000342785 WFDC10BQ8IUB3 73 aa5.01□□□□□ -1.61
VCAN-202ENST00000342785 ZNF575Q86XF7 245 aa5□□□□□ -1.61
VCAN-202ENST00000342785 DHRS4-AS1Q9P1J3 65 aa5□□□□□ -1.61
VCAN-202ENST00000342785 LYPD5Q6UWN5 251 aa5□□□□□ -1.61
VCAN-202ENST00000342785 LINC01561Q8N1V8 128 aa5□□□□□ -1.61
VCAN-202ENST00000342785 FAM218AQ96MZ4 157 aa5□□□□□ -1.61
VCAN-202ENST00000342785 EIF4EBP3O60516 100 aaPredicted RBP5□□□□□ -1.61
VCAN-202ENST00000342785 X6R8D5 127 aa5□□□□□ -1.61
VCAN-202ENST00000342785 FLNCQ14315 2725 aa4.99□□□□□ -1.61
VCAN-202ENST00000342785 H0Y9J4 135 aa4.99□□□□□ -1.61
VCAN-202ENST00000342785 LINC00575Q6W349 94 aa4.99□□□□□ -1.61
VCAN-202ENST00000342785 CELA1Q9UNI1 258 aa4.99□□□□□ -1.61
VCAN-202ENST00000342785 SNURFQ9Y675 71 aa4.99□□□□□ -1.61
VCAN-202ENST00000342785 TRBV7-7A0A0K0K1E9 115 aa4.99□□□□□ -1.61
VCAN-202ENST00000342785 A0A096LNT2 108 aa4.99□□□□□ -1.61
VCAN-202ENST00000342785 B9D2Q9BPU9 175 aa4.99□□□□□ -1.61
VCAN-202ENST00000342785 LAMA1P25391 3075 aa4.99□□□□□ -1.61
VCAN-202ENST00000342785 NDUFC2-KCTD14E9PQ53 114 aa4.98□□□□□ -1.61
VCAN-202ENST00000342785 FAM19A3Q7Z5A8 133 aa4.98□□□□□ -1.61
VCAN-202ENST00000342785 NOTCH1P46531 2555 aa4.98□□□□□ -1.61
VCAN-202ENST00000342785 PPDPFQ9H3Y8 114 aa4.98□□□□□ -1.61
VCAN-202ENST00000342785 LOC107984640A0A0U1RRK4 108 aa4.97□□□□□ -1.61
VCAN-202ENST00000342785 Q6ZRU5 148 aa4.97□□□□□ -1.61
VCAN-202ENST00000342785 UNC79Q9P2D8 2635 aa4.97□□□□□ -1.61
VCAN-202ENST00000342785 C10orf25Q5T742 122 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms