RNA–Protein interactions for RNA: ENST00000342644.9

SNX21-201, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-201ENST00000342644 NDUFA12Q9UI09 145 aa13.67□□□□□ -0.22
SNX21-201ENST00000342644 MALP21145 153 aa13.66□□□□□ -0.22
SNX21-201ENST00000342644 ORAOV1Q8WV07 137 aa13.66□□□□□ -0.22
SNX21-201ENST00000342644 A6NDN8 102 aa13.65□□□□□ -0.22
SNX21-201ENST00000342644 TMEM238C9JI98 176 aa13.65□□□□□ -0.22
SNX21-201ENST00000342644 APOMO95445 188 aa13.65□□□□□ -0.22
SNX21-201ENST00000342644 GCSHP23434 173 aa13.65□□□□□ -0.22
SNX21-201ENST00000342644 CFAP161Q6P656 301 aa13.64□□□□□ -0.23
SNX21-201ENST00000342644 SPANXB1Q9NS25 103 aaPredicted RBP13.64□□□□□ -0.23
SNX21-201ENST00000342644 NDUFA1O15239 70 aa13.64□□□□□ -0.23
SNX21-201ENST00000342644 SRSF9Q13242 221 aaKnown RBP eCLIP13.64□□□□□ -0.23
SNX21-201ENST00000342644 CEND1Q8N111 149 aa13.64□□□□□ -0.23
SNX21-201ENST00000342644 LRCOL1A6NCL2 159 aa13.62□□□□□ -0.23
SNX21-201ENST00000342644 PTTG1IPP53801 180 aa13.62□□□□□ -0.23
SNX21-201ENST00000342644 C15orf56Q8N910 161 aa13.62□□□□□ -0.23
SNX21-201ENST00000342644 RYR2Q92736 4967 aa13.61□□□□□ -0.23
SNX21-201ENST00000342644 DNAH17Q9UFH2 4485 aa13.61□□□□□ -0.23
SNX21-201ENST00000342644 RTL8CO15255 209 aa13.61□□□□□ -0.23
SNX21-201ENST00000342644 A0A0J9YXY3 114 aa13.6□□□□□ -0.23
SNX21-201ENST00000342644 TMEM238LA0A1B0GVL6 79 aa13.6□□□□□ -0.23
SNX21-201ENST00000342644 A6NJY4 79 aa13.6□□□□□ -0.23
SNX21-201ENST00000342644 USP17L23D6RBM5 183 aa13.6□□□□□ -0.23
SNX21-201ENST00000342644 SFTA2Q6UW10 78 aa13.6□□□□□ -0.23
SNX21-201ENST00000342644 COX7B2Q8TF08 81 aa13.6□□□□□ -0.23
SNX21-201ENST00000342644 FRAS1Q86XX4 4008 aa13.6□□□□□ -0.23
SNX21-201ENST00000342644 GVQW2A0A096LPI5 108 aaPredicted RBP13.59□□□□□ -0.23
SNX21-201ENST00000342644 HERV-K104P63124 156 aa13.59□□□□□ -0.23
SNX21-201ENST00000342644 CIRBPQ14011 172 aaKnown RBP13.58□□□□□ -0.24
SNX21-201ENST00000342644 KIAA0087Q14695 138 aa13.58□□□□□ -0.24
SNX21-201ENST00000342644 C14orf177Q52M58 125 aa13.58□□□□□ -0.24
SNX21-201ENST00000342644 Q8IZM0 81 aa13.58□□□□□ -0.24
SNX21-201ENST00000342644 TOMM7Q9P0U1 55 aa13.58□□□□□ -0.24
SNX21-201ENST00000342644 TIMM17BO60830 172 aa13.57□□□□□ -0.24
SNX21-201ENST00000342644 WFDC2Q14508 124 aa13.57□□□□□ -0.24
SNX21-201ENST00000342644 A0A087WTM6 91 aa13.56□□□□□ -0.24
SNX21-201ENST00000342644 PRSS2P07478 247 aa13.56□□□□□ -0.24
SNX21-201ENST00000342644 FXYD2P54710 66 aa13.56□□□□□ -0.24
SNX21-201ENST00000342644 LECT2O14960 151 aa13.55□□□□□ -0.24
SNX21-201ENST00000342644 SPAG11BQ08648 103 aa13.55□□□□□ -0.24
SNX21-201ENST00000342644 Q6ZVH6 145 aa13.55□□□□□ -0.24
SNX21-201ENST00000342644 F8WDY8 70 aa13.54□□□□□ -0.24
SNX21-201ENST00000342644 ZNF561-AS1K7EIQ3 104 aa13.54□□□□□ -0.24
SNX21-201ENST00000342644 C2orf48Q96LS8 159 aa13.54□□□□□ -0.24
SNX21-201ENST00000342644 HIGD2BQ4VC39 106 aa13.54□□□□□ -0.24
SNX21-201ENST00000342644 MEIG1Q5JSS6 88 aa13.54□□□□□ -0.24
SNX21-201ENST00000342644 ZNF625Q96I27 306 aaPredicted RBP13.54□□□□□ -0.24
SNX21-201ENST00000342644 SPANXDQ9BXN6 97 aa13.54□□□□□ -0.24
SNX21-201ENST00000342644 SPANXCQ9NY87 97 aa13.54□□□□□ -0.24
SNX21-201ENST00000342644 TNP2Q05952 138 aa13.53□□□□□ -0.24
SNX21-201ENST00000342644 C6orf226Q5I0X4 101 aa13.53□□□□□ -0.24
SNX21-201ENST00000342644 NTN5Q8WTR8 489 aaPredicted RBP13.53□□□□□ -0.24
SNX21-201ENST00000342644 A0A1B0GV90 55 aa13.52□□□□□ -0.25
SNX21-201ENST00000342644 CXCL5P42830 114 aa13.52□□□□□ -0.25
SNX21-201ENST00000342644 RPL24P83731 157 aaKnown RBP13.52□□□□□ -0.25
SNX21-201ENST00000342644 LINC00336Q6ZUF6 198 aa13.52□□□□□ -0.25
SNX21-201ENST00000342644 COPS9Q8WXC6 57 aa13.52□□□□□ -0.25
SNX21-201ENST00000342644 NHP2Q9NX24 153 aaKnown RBP13.52□□□□□ -0.25
SNX21-201ENST00000342644 SMIM13P0DJ93 91 aa13.51□□□□□ -0.25
SNX21-201ENST00000342644 Q8N814 137 aa13.51□□□□□ -0.25
SNX21-201ENST00000342644 FAT2Q9NYQ8 4349 aa13.5□□□□□ -0.25
SNX21-201ENST00000342644 LINC00526Q96FQ7 95 aa13.49□□□□□ -0.25
SNX21-201ENST00000342644 LITAFQ99732 161 aa13.49□□□□□ -0.25
SNX21-201ENST00000342644 TAX1BP3O14907 124 aa13.48□□□□□ -0.25
SNX21-201ENST00000342644 IFITM1P13164 125 aa13.48□□□□□ -0.25
SNX21-201ENST00000342644 CKS1BP61024 79 aa13.48□□□□□ -0.25
SNX21-201ENST00000342644 CNBPP62633 177 aaKnown RBP13.48□□□□□ -0.25
SNX21-201ENST00000342644 SLPIP03973 132 aa13.47□□□□□ -0.25
SNX21-201ENST00000342644 CAMK2N2Q96S95 79 aa13.47□□□□□ -0.25
SNX21-201ENST00000342644 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.45□□□□□ -0.26
SNX21-201ENST00000342644 SYCNQ0VAF6 134 aa13.45□□□□□ -0.26
SNX21-201ENST00000342644 C2orf82Q6UX34 121 aa13.45□□□□□ -0.26
SNX21-201ENST00000342644 UNQ6190/PRO20217Q6UXQ8 127 aa13.44□□□□□ -0.26
SNX21-201ENST00000342644 MUSTN1Q8IVN3 82 aa13.44□□□□□ -0.26
SNX21-201ENST00000342644 RYR3Q15413 4870 aa13.44□□□□□ -0.26
SNX21-201ENST00000342644 TRBV30A0A0K0K1B3 111 aa13.44□□□□□ -0.26
SNX21-201ENST00000342644 A0A1B0GWB2 263 aa13.44□□□□□ -0.26
SNX21-201ENST00000342644 RAB37Q96AX2 223 aa13.44□□□□□ -0.26
SNX21-201ENST00000342644 K7ERJ3 54 aa13.43□□□□□ -0.26
SNX21-201ENST00000342644 RNF151Q2KHN1 245 aa13.43□□□□□ -0.26
SNX21-201ENST00000342644 ADAMTSL4-AS1Q5T5F5 129 aa13.43□□□□□ -0.26
SNX21-201ENST00000342644 C10orf25Q5T742 122 aa13.43□□□□□ -0.26
SNX21-201ENST00000342644 Q6ZRU5 148 aa13.43□□□□□ -0.26
SNX21-201ENST00000342644 CARD19Q96LW7 228 aa13.43□□□□□ -0.26
SNX21-201ENST00000342644 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.42□□□□□ -0.26
SNX21-201ENST00000342644 DNAH11Q96DT5 4516 aa13.42□□□□□ -0.26
SNX21-201ENST00000342644 A4D1N5 150 aa13.41□□□□□ -0.26
SNX21-201ENST00000342644 C9orf118A6NHY6 69 aa13.41□□□□□ -0.26
SNX21-201ENST00000342644 PPDPFQ9H3Y8 114 aa13.4□□□□□ -0.26
SNX21-201ENST00000342644 C6orf48Q9UBA6 75 aa13.4□□□□□ -0.26
SNX21-201ENST00000342644 ERG28Q9UKR5 140 aa13.4□□□□□ -0.26
SNX21-201ENST00000342644 A0A0B4J2C4 111 aa13.39□□□□□ -0.27
SNX21-201ENST00000342644 A0A0U1RRA0 63 aa13.39□□□□□ -0.27
SNX21-201ENST00000342644 NPC2P61916 151 aa13.39□□□□□ -0.27
SNX21-201ENST00000342644 LINC00158P58513 81 aa13.39□□□□□ -0.27
SNX21-201ENST00000342644 DAND5Q8N907 189 aa13.39□□□□□ -0.27
SNX21-201ENST00000342644 C9orf163Q8N9P6 203 aa13.39□□□□□ -0.27
SNX21-201ENST00000342644 HECTD4Q9Y4D8 3996 aa13.38□□□□□ -0.27
SNX21-201ENST00000342644 LINC00308Q8TCZ7 52 aa13.38□□□□□ -0.27
SNX21-201ENST00000342644 PGPEP1Q9NXJ5 209 aa13.38□□□□□ -0.27
SNX21-201ENST00000342644 PKD1P98161 4303 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms