RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 A0A0U1RRA0 63 aa11.46□□□□□ -0.57
FRMD4A-202ENST00000342409 SMIM13P0DJ93 91 aa11.46□□□□□ -0.57
FRMD4A-202ENST00000342409 RAB37Q96AX2 223 aa11.46□□□□□ -0.57
FRMD4A-202ENST00000342409 KLK5Q9Y337 293 aaPredicted RBP11.46□□□□□ -0.57
FRMD4A-202ENST00000342409 VPS13DQ5THJ4 4388 aa11.46□□□□□ -0.57
FRMD4A-202ENST00000342409 MALP21145 153 aa11.46□□□□□ -0.58
FRMD4A-202ENST00000342409 C6orf226Q5I0X4 101 aa11.46□□□□□ -0.58
FRMD4A-202ENST00000342409 A4D1N5 150 aa11.45□□□□□ -0.58
FRMD4A-202ENST00000342409 IBA57-AS1B1ANH7 110 aa11.44□□□□□ -0.58
FRMD4A-202ENST00000342409 NPC2P61916 151 aa11.44□□□□□ -0.58
FRMD4A-202ENST00000342409 MEIG1Q5JSS6 88 aa11.44□□□□□ -0.58
FRMD4A-202ENST00000342409 SOSTDC1Q6X4U4 206 aa11.44□□□□□ -0.58
FRMD4A-202ENST00000342409 TGP01266 2768 aa11.44□□□□□ -0.58
FRMD4A-202ENST00000342409 PRSS2P07478 247 aa11.43□□□□□ -0.58
FRMD4A-202ENST00000342409 CFC1BP0CG36 223 aa11.43□□□□□ -0.58
FRMD4A-202ENST00000342409 CFC1P0CG37 223 aa11.43□□□□□ -0.58
FRMD4A-202ENST00000342409 NAA38Q9BRA0 125 aaKnown RBP11.43□□□□□ -0.58
FRMD4A-202ENST00000342409 NUPR2A6NF83 97 aa11.43□□□□□ -0.58
FRMD4A-202ENST00000342409 C9orf118A6NHY6 69 aa11.43□□□□□ -0.58
FRMD4A-202ENST00000342409 CIRBPQ14011 172 aaKnown RBP11.43□□□□□ -0.58
FRMD4A-202ENST00000342409 C6orf223Q8N319 242 aa11.43□□□□□ -0.58
FRMD4A-202ENST00000342409 LINC00526Q96FQ7 95 aa11.43□□□□□ -0.58
FRMD4A-202ENST00000342409 TMEM238LA0A1B0GVL6 79 aa11.42□□□□□ -0.58
FRMD4A-202ENST00000342409 A6NJY4 79 aa11.42□□□□□ -0.58
FRMD4A-202ENST00000342409 LINC00308Q8TCZ7 52 aa11.42□□□□□ -0.58
FRMD4A-202ENST00000342409 Q9HAA7 133 aa11.42□□□□□ -0.58
FRMD4A-202ENST00000342409 DNAH10Q8IVF4 4471 aa11.42□□□□□ -0.58
FRMD4A-202ENST00000342409 APOMO95445 188 aa11.41□□□□□ -0.58
FRMD4A-202ENST00000342409 IFITM1P13164 125 aa11.41□□□□□ -0.58
FRMD4A-202ENST00000342409 SPAG11BQ08648 103 aa11.41□□□□□ -0.58
FRMD4A-202ENST00000342409 C1orf43Q9BWL3 253 aa11.41□□□□□ -0.58
FRMD4A-202ENST00000342409 IGKV2D-24A0A075B6R9 120 aa11.4□□□□□ -0.58
FRMD4A-202ENST00000342409 RPL24P83731 157 aaKnown RBP11.4□□□□□ -0.58
FRMD4A-202ENST00000342409 C10orf25Q5T742 122 aa11.4□□□□□ -0.58
FRMD4A-202ENST00000342409 SFTA2Q6UW10 78 aa11.4□□□□□ -0.58
FRMD4A-202ENST00000342409 C15orf56Q8N910 161 aa11.4□□□□□ -0.58
FRMD4A-202ENST00000342409 KRTAP1-5Q9BYS1 174 aa11.4□□□□□ -0.58
FRMD4A-202ENST00000342409 CFAP161Q6P656 301 aa11.4□□□□□ -0.58
FRMD4A-202ENST00000342409 ERG28Q9UKR5 140 aa11.4□□□□□ -0.58
FRMD4A-202ENST00000342409 H3BUT2 72 aa11.39□□□□□ -0.59
FRMD4A-202ENST00000342409 MIR7-3HGQ8N6C7 128 aa11.39□□□□□ -0.59
FRMD4A-202ENST00000342409 CXCL5P42830 114 aa11.38□□□□□ -0.59
FRMD4A-202ENST00000342409 CKS1BP61024 79 aa11.38□□□□□ -0.59
FRMD4A-202ENST00000342409 UNQ6190/PRO20217Q6UXQ8 127 aa11.38□□□□□ -0.59
FRMD4A-202ENST00000342409 PFN2P35080 140 aa11.38□□□□□ -0.59
FRMD4A-202ENST00000342409 CASC10Q5T4H9 136 aa11.38□□□□□ -0.59
FRMD4A-202ENST00000342409 NTN5Q8WTR8 489 aaPredicted RBP11.38□□□□□ -0.59
FRMD4A-202ENST00000342409 LINC00158P58513 81 aa11.37□□□□□ -0.59
FRMD4A-202ENST00000342409 C9orf116Q5BN46 136 aaPredicted RBP11.37□□□□□ -0.59
FRMD4A-202ENST00000342409 A0A0B4J2C4 111 aa11.36□□□□□ -0.59
FRMD4A-202ENST00000342409 HIGD2BQ4VC39 106 aa11.36□□□□□ -0.59
FRMD4A-202ENST00000342409 PPDPFQ9H3Y8 114 aa11.36□□□□□ -0.59
FRMD4A-202ENST00000342409 UBE2DNLQ8IWF7 75 aa11.35□□□□□ -0.59
FRMD4A-202ENST00000342409 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.35□□□□□ -0.59
FRMD4A-202ENST00000342409 TSPAN13O95857 204 aa11.35□□□□□ -0.59
FRMD4A-202ENST00000342409 PGPEP1Q9NXJ5 209 aa11.35□□□□□ -0.59
FRMD4A-202ENST00000342409 A0A1W2PPM0 123 aa11.34□□□□□ -0.59
FRMD4A-202ENST00000342409 PRO1854Q9UHT4 67 aa11.34□□□□□ -0.59
FRMD4A-202ENST00000342409 GVQW2A0A096LPI5 108 aaPredicted RBP11.32□□□□□ -0.6
FRMD4A-202ENST00000342409 C6orf48Q9UBA6 75 aa11.32□□□□□ -0.6
FRMD4A-202ENST00000342409 VAMP3Q15836 100 aa11.32□□□□□ -0.6
FRMD4A-202ENST00000342409 COX17Q14061 63 aa11.3□□□□□ -0.6
FRMD4A-202ENST00000342409 LOC107984156A0A0G2JMH3 177 aa11.29□□□□□ -0.6
FRMD4A-202ENST00000342409 ZNF561-AS1K7EIQ3 104 aa11.29□□□□□ -0.6
FRMD4A-202ENST00000342409 ARL17AQ8IVW1 177 aa11.29□□□□□ -0.6
FRMD4A-202ENST00000342409 COPS9Q8WXC6 57 aa11.29□□□□□ -0.6
FRMD4A-202ENST00000342409 C2orf48Q96LS8 159 aa11.29□□□□□ -0.6
FRMD4A-202ENST00000342409 Q6ZRU5 148 aa11.29□□□□□ -0.6
FRMD4A-202ENST00000342409 RMI2Q96E14 147 aa11.29□□□□□ -0.6
FRMD4A-202ENST00000342409 IGKV2-28A0A075B6P5 120 aa11.28□□□□□ -0.6
FRMD4A-202ENST00000342409 IGKV2D-28P01615 120 aa11.28□□□□□ -0.6
FRMD4A-202ENST00000342409 USP17L23D6RBM5 183 aa11.27□□□□□ -0.61
FRMD4A-202ENST00000342409 UBE2V1Q13404 147 aa11.27□□□□□ -0.61
FRMD4A-202ENST00000342409 CAMK2N2Q96S95 79 aa11.27□□□□□ -0.61
FRMD4A-202ENST00000342409 SND1-IT1Q9HBX3 110 aa11.27□□□□□ -0.61
FRMD4A-202ENST00000342409 FABP2P12104 132 aa11.26□□□□□ -0.61
FRMD4A-202ENST00000342409 MUC7Q8TAX7 377 aa11.26□□□□□ -0.61
FRMD4A-202ENST00000342409 TRBV30A0A0K0K1B3 111 aa11.26□□□□□ -0.61
FRMD4A-202ENST00000342409 H7C2G1 150 aa11.26□□□□□ -0.61
FRMD4A-202ENST00000342409 K7EP34 96 aa11.26□□□□□ -0.61
FRMD4A-202ENST00000342409 SLPIP03973 132 aa11.26□□□□□ -0.61
FRMD4A-202ENST00000342409 Q8NDZ9 215 aa11.26□□□□□ -0.61
FRMD4A-202ENST00000342409 NBDYA0A0U1RRE5 68 aa11.25□□□□□ -0.61
FRMD4A-202ENST00000342409 RPL13AP40429 203 aaKnown RBP11.25□□□□□ -0.61
FRMD4A-202ENST00000342409 WFDC2Q14508 124 aa11.25□□□□□ -0.61
FRMD4A-202ENST00000342409 KMT2AQ03164 3969 aa11.25□□□□□ -0.61
FRMD4A-202ENST00000342409 LINC00337Q8N6G1 96 aa11.24□□□□□ -0.61
FRMD4A-202ENST00000342409 SPCS1Q9Y6A9 102 aa11.24□□□□□ -0.61
FRMD4A-202ENST00000342409 DNAH6Q9C0G6 4158 aa11.24□□□□□ -0.61
FRMD4A-202ENST00000342409 LECT2O14960 151 aa11.23□□□□□ -0.61
FRMD4A-202ENST00000342409 F8WDY8 70 aa11.23□□□□□ -0.61
FRMD4A-202ENST00000342409 GAGE10A6NGK3 116 aa11.22□□□□□ -0.61
FRMD4A-202ENST00000342409 SYCNQ0VAF6 134 aa11.22□□□□□ -0.61
FRMD4A-202ENST00000342409 TRIAP1O43715 76 aa11.21□□□□□ -0.62
FRMD4A-202ENST00000342409 DNAH2Q9P225 4427 aa11.2□□□□□ -0.62
FRMD4A-202ENST00000342409 PRR3P79522 188 aaKnown RBP11.2□□□□□ -0.62
FRMD4A-202ENST00000342409 TTC32Q5I0X7 151 aa11.2□□□□□ -0.62
FRMD4A-202ENST00000342409 ALMS1Q8TCU4 4167 aa11.19□□□□□ -0.62
FRMD4A-202ENST00000342409 Q1RN00 199 aa11.19□□□□□ -0.62
FRMD4A-202ENST00000342409 Q6ZRN7 208 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms