RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 SMIM26A0A096LP01 95 aa10.8□□□□□ -0.68
COL11A2-201ENST00000341947 PCOTHQ58A44 107 aa10.8□□□□□ -0.68
COL11A2-201ENST00000341947 LINC01561Q8N1V8 128 aa10.8□□□□□ -0.68
COL11A2-201ENST00000341947 WNK1Q9H4A3 2382 aa10.8□□□□□ -0.68
COL11A2-201ENST00000341947 SPINK1P00995 79 aa10.8□□□□□ -0.68
COL11A2-201ENST00000341947 Q6ZSN1 163 aa10.8□□□□□ -0.68
COL11A2-201ENST00000341947 TANC2Q9HCD6 1990 aa10.79□□□□□ -0.68
COL11A2-201ENST00000341947 ADAMTSL4-AS1Q5T5F5 129 aa10.79□□□□□ -0.68
COL11A2-201ENST00000341947 A0A1W2PPR1 153 aa10.78□□□□□ -0.68
COL11A2-201ENST00000341947 URB1-AS1Q96HZ7 61 aa10.78□□□□□ -0.68
COL11A2-201ENST00000341947 H0Y9P7 68 aa10.78□□□□□ -0.68
COL11A2-201ENST00000341947 PTPN13Q12923 2485 aa10.77□□□□□ -0.69
COL11A2-201ENST00000341947 Q6ZRU5 148 aa10.77□□□□□ -0.69
COL11A2-201ENST00000341947 A0A087WVE0 104 aa10.77□□□□□ -0.69
COL11A2-201ENST00000341947 PCNX3Q9H6A9 2034 aa10.77□□□□□ -0.69
COL11A2-201ENST00000341947 COX8CQ7Z4L0 72 aa10.76□□□□□ -0.69
COL11A2-201ENST00000341947 FHL3Q13643 280 aa10.76□□□□□ -0.69
COL11A2-201ENST00000341947 Q8N2B8 174 aa10.76□□□□□ -0.69
COL11A2-201ENST00000341947 Q8N3U1 123 aa10.75□□□□□ -0.69
COL11A2-201ENST00000341947 DEFB116Q30KQ4 102 aa10.75□□□□□ -0.69
COL11A2-201ENST00000341947 TRBV7-7A0A0K0K1E9 115 aa10.75□□□□□ -0.69
COL11A2-201ENST00000341947 SBSPONQ8IVN8 264 aa10.75□□□□□ -0.69
COL11A2-201ENST00000341947 PRLHP81277 87 aa10.75□□□□□ -0.69
COL11A2-201ENST00000341947 C10orf142B7Z368 130 aa10.74□□□□□ -0.69
COL11A2-201ENST00000341947 LINC00337Q8N6G1 96 aa10.73□□□□□ -0.69
COL11A2-201ENST00000341947 HCG22E2RYF7 251 aa10.73□□□□□ -0.69
COL11A2-201ENST00000341947 C1orf195Q5TG92 126 aa10.73□□□□□ -0.69
COL11A2-201ENST00000341947 SONP18583 2426 aaKnown RBP10.73□□□□□ -0.69
COL11A2-201ENST00000341947 SOSTDC1Q6X4U4 206 aa10.73□□□□□ -0.69
COL11A2-201ENST00000341947 C22orf24Q9Y442 160 aa10.72□□□□□ -0.69
COL11A2-201ENST00000341947 ATG2AQ2TAZ0 1938 aa10.72□□□□□ -0.69
COL11A2-201ENST00000341947 SMCR5Q8TEV8 140 aa10.72□□□□□ -0.69
COL11A2-201ENST00000341947 TTC28Q96AY4 2481 aa10.72□□□□□ -0.69
COL11A2-201ENST00000341947 LRP4O75096 1905 aa10.72□□□□□ -0.69
COL11A2-201ENST00000341947 LINC00310P59036 64 aa10.72□□□□□ -0.69
COL11A2-201ENST00000341947 HCFC1P51610 2035 aa10.72□□□□□ -0.69
COL11A2-201ENST00000341947 RAI1Q7Z5J4 1906 aaPredicted RBP10.71□□□□□ -0.69
COL11A2-201ENST00000341947 HIVEP3Q5T1R4 2406 aa10.71□□□□□ -0.69
COL11A2-201ENST00000341947 MDFIQ99750 246 aa10.7□□□□□ -0.7
COL11A2-201ENST00000341947 PRRC2AP48634 2157 aaKnown RBP10.69□□□□□ -0.7
COL11A2-201ENST00000341947 A8MTW9 85 aa10.68□□□□□ -0.7
COL11A2-201ENST00000341947 NAV3Q8IVL0 2385 aa10.68□□□□□ -0.7
COL11A2-201ENST00000341947 PMAIP1Q13794 54 aa10.67□□□□□ -0.7
COL11A2-201ENST00000341947 IGKV2D-30A0A075B6S6 120 aa10.65□□□□□ -0.7
COL11A2-201ENST00000341947 IGKV2-30P06310 120 aa10.65□□□□□ -0.7
COL11A2-201ENST00000341947 hDV103S1A0JD37 113 aa10.65□□□□□ -0.71
COL11A2-201ENST00000341947 ATRXP46100 2492 aa10.65□□□□□ -0.71
COL11A2-201ENST00000341947 NAV2Q8IVL1 2488 aa10.64□□□□□ -0.71
COL11A2-201ENST00000341947 CRYGAP11844 174 aa10.63□□□□□ -0.71
COL11A2-201ENST00000341947 A0A096LNJ9 63 aa10.63□□□□□ -0.71
COL11A2-201ENST00000341947 C7orf65Q6ZTY9 151 aa10.63□□□□□ -0.71
COL11A2-201ENST00000341947 PLXNB1O43157 2135 aa10.63□□□□□ -0.71
COL11A2-201ENST00000341947 COL5A1P20908 1838 aaPredicted RBP10.63□□□□□ -0.71
COL11A2-201ENST00000341947 PSPHP1O15172 72 aa10.62□□□□□ -0.71
COL11A2-201ENST00000341947 C11orf72Q8NBR9 251 aa10.62□□□□□ -0.71
COL11A2-201ENST00000341947 TMEM254Q8TBM7 123 aa10.62□□□□□ -0.71
COL11A2-201ENST00000341947 C1orf64Q8NEQ6 169 aa10.62□□□□□ -0.71
COL11A2-201ENST00000341947 SPACA4Q8TDM5 124 aa10.62□□□□□ -0.71
COL11A2-201ENST00000341947 KIAA0087Q14695 138 aa10.61□□□□□ -0.71
COL11A2-201ENST00000341947 EXPH5Q8NEV8 1989 aa10.61□□□□□ -0.71
COL11A2-201ENST00000341947 CXCL6P80162 114 aa10.61□□□□□ -0.71
COL11A2-201ENST00000341947 LINC00846Q9NV44 126 aa10.6□□□□□ -0.71
COL11A2-201ENST00000341947 CACNA1AO00555 2505 aa10.6□□□□□ -0.71
COL11A2-201ENST00000341947 ARHGAP32A7KAX9 2087 aa10.6□□□□□ -0.71
COL11A2-201ENST00000341947 MOBPQ13875 183 aa10.59□□□□□ -0.71
COL11A2-201ENST00000341947 LINC00167Q96N53 147 aa10.58□□□□□ -0.72
COL11A2-201ENST00000341947 KIF25-AS1Q9Y6Z4 181 aa10.58□□□□□ -0.72
COL11A2-201ENST00000341947 PTPRSQ13332 1948 aa10.57□□□□□ -0.72
COL11A2-201ENST00000341947 IGLV5-39A0A0G2JS06 123 aa10.57□□□□□ -0.72
COL11A2-201ENST00000341947 FAM229AH3BQW9 127 aa10.57□□□□□ -0.72
COL11A2-201ENST00000341947 EML5Q05BV3 1969 aa10.57□□□□□ -0.72
COL11A2-201ENST00000341947 ADAMTS20P59510 1910 aa10.56□□□□□ -0.72
COL11A2-201ENST00000341947 SMIM29Q86T20 159 aa10.55□□□□□ -0.72
COL11A2-201ENST00000341947 TP53AIP1Q9HCN2 124 aa10.55□□□□□ -0.72
COL11A2-201ENST00000341947 H3BNG1 76 aa10.54□□□□□ -0.72
COL11A2-201ENST00000341947 C6orf48Q9UBA6 75 aa10.54□□□□□ -0.72
COL11A2-201ENST00000341947 CPAMD8Q8IZJ3 1885 aa10.54□□□□□ -0.72
COL11A2-201ENST00000341947 SPATA3Q8NHX4 192 aa10.54□□□□□ -0.72
COL11A2-201ENST00000341947 IGHV3OR16-9A0A0B4J2B5 98 aa10.53□□□□□ -0.72
COL11A2-201ENST00000341947 RTL8CO15255 209 aa10.52□□□□□ -0.73
COL11A2-201ENST00000341947 A0A1B0GU69 56 aa10.51□□□□□ -0.73
COL11A2-201ENST00000341947 LINC01546A6NGU7 62 aa10.5□□□□□ -0.73
COL11A2-201ENST00000341947 LINC00315P59091 139 aa10.5□□□□□ -0.73
COL11A2-201ENST00000341947 FAM19A4Q96LR4 140 aa10.5□□□□□ -0.73
COL11A2-201ENST00000341947 Q9UF83 564 aa10.5□□□□□ -0.73
COL11A2-201ENST00000341947 ACYP2P14621 99 aa10.5□□□□□ -0.73
COL11A2-201ENST00000341947 PHF5AQ7RTV0 110 aaKnown RBP10.49□□□□□ -0.73
COL11A2-201ENST00000341947 Q8NBF4 154 aa10.49□□□□□ -0.73
COL11A2-201ENST00000341947 CCDC168Q8NDH2 2452 aa10.49□□□□□ -0.73
COL11A2-201ENST00000341947 Q6ZRP5 223 aa10.48□□□□□ -0.73
COL11A2-201ENST00000341947 NBDYA0A0U1RRE5 68 aa10.47□□□□□ -0.73
COL11A2-201ENST00000341947 ELOF1P60002 83 aaKnown RBP10.47□□□□□ -0.73
COL11A2-201ENST00000341947 TYMSOSQ8TAI1 123 aa10.47□□□□□ -0.73
COL11A2-201ENST00000341947 KRTAP24-1Q3LI83 254 aa10.47□□□□□ -0.73
COL11A2-201ENST00000341947 C16orf90A8MZG2 172 aa10.47□□□□□ -0.73
COL11A2-201ENST00000341947 AGRNO00468 2067 aa10.46□□□□□ -0.73
COL11A2-201ENST00000341947 A0A1B0GW54 56 aa10.45□□□□□ -0.74
COL11A2-201ENST00000341947 LINC00313P59037 77 aa10.45□□□□□ -0.74
COL11A2-201ENST00000341947 ABCA2Q9BZC7 2435 aa10.44□□□□□ -0.74
COL11A2-201ENST00000341947 Q6ZRX8 168 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 851 ms