RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 CELA1Q9UNI1 258 aa10.38□□□□□ -0.75
TPM3-208ENST00000341485 A0A096LPF7 62 aa10.37□□□□□ -0.75
TPM3-208ENST00000341485 TEX49A0A1B0GTD5 131 aa10.37□□□□□ -0.75
TPM3-208ENST00000341485 H3BT86 120 aa10.37□□□□□ -0.75
TPM3-208ENST00000341485 MIR7-3HGQ8N6C7 128 aa10.37□□□□□ -0.75
TPM3-208ENST00000341485 TMEM262E9PQX1 116 aa10.37□□□□□ -0.75
TPM3-208ENST00000341485 PAX4O43316 350 aa10.37□□□□□ -0.75
TPM3-208ENST00000341485 XGP55808 180 aa10.37□□□□□ -0.75
TPM3-208ENST00000341485 A0A1B0GUV1 79 aa10.36□□□□□ -0.75
TPM3-208ENST00000341485 COX7A2LO14548 114 aa10.36□□□□□ -0.75
TPM3-208ENST00000341485 MT-ATP8P03928 68 aa10.36□□□□□ -0.75
TPM3-208ENST00000341485 DEFB121Q5J5C9 76 aa10.35□□□□□ -0.75
TPM3-208ENST00000341485 UBE2WQ96B02 151 aa10.35□□□□□ -0.75
TPM3-208ENST00000341485 ATP5G1P05496 136 aa10.35□□□□□ -0.75
TPM3-208ENST00000341485 LINC00158P58513 81 aa10.34□□□□□ -0.75
TPM3-208ENST00000341485 K7EIL1 84 aa10.34□□□□□ -0.75
TPM3-208ENST00000341485 XCL1P47992 114 aa10.34□□□□□ -0.75
TPM3-208ENST00000341485 KPRPQ5T749 579 aaPredicted RBP10.34□□□□□ -0.75
TPM3-208ENST00000341485 CLPSL2Q6UWE3 100 aa10.34□□□□□ -0.75
TPM3-208ENST00000341485 HTN3P15516 51 aa10.33□□□□□ -0.76
TPM3-208ENST00000341485 SS18Q15532 418 aa10.33□□□□□ -0.76
TPM3-208ENST00000341485 ANK2Q01484 3957 aa10.32□□□□□ -0.76
TPM3-208ENST00000341485 IGKV2-28A0A075B6P5 120 aa10.32□□□□□ -0.76
TPM3-208ENST00000341485 IBA57-AS1B1ANH7 110 aa10.32□□□□□ -0.76
TPM3-208ENST00000341485 IGKV2D-28P01615 120 aa10.32□□□□□ -0.76
TPM3-208ENST00000341485 SND1-IT1Q9HBX3 110 aa10.32□□□□□ -0.76
TPM3-208ENST00000341485 LINC00337Q8N6G1 96 aa10.32□□□□□ -0.76
TPM3-208ENST00000341485 TRAV13-2A0A0B4J235 113 aa10.31□□□□□ -0.76
TPM3-208ENST00000341485 CCL18P55774 89 aa10.31□□□□□ -0.76
TPM3-208ENST00000341485 C11orf68Q9H3H3 251 aaKnown RBP10.31□□□□□ -0.76
TPM3-208ENST00000341485 CRPP02741 224 aa10.3□□□□□ -0.76
TPM3-208ENST00000341485 PFN2P35080 140 aa10.3□□□□□ -0.76
TPM3-208ENST00000341485 MRAPQ8TCY5 172 aa10.3□□□□□ -0.76
TPM3-208ENST00000341485 C6orf226Q5I0X4 101 aa10.3□□□□□ -0.76
TPM3-208ENST00000341485 NBEAL2Q6ZNJ1 2754 aa10.29□□□□□ -0.76
TPM3-208ENST00000341485 TRAV8-4A0A0B4J246 113 aa10.29□□□□□ -0.76
TPM3-208ENST00000341485 Q8N3U1 123 aa10.29□□□□□ -0.76
TPM3-208ENST00000341485 DNAH3Q8TD57 4116 aa10.29□□□□□ -0.76
TPM3-208ENST00000341485 RPL28P46779 137 aaKnown RBP10.29□□□□□ -0.76
TPM3-208ENST00000341485 FAM218AQ96MZ4 157 aa10.29□□□□□ -0.76
TPM3-208ENST00000341485 TRAV26-1A0A087WT03 109 aa10.28□□□□□ -0.76
TPM3-208ENST00000341485 A0A0J9YWU9 116 aa10.28□□□□□ -0.76
TPM3-208ENST00000341485 Q8IZM0 81 aa10.28□□□□□ -0.76
TPM3-208ENST00000341485 LINC01561Q8N1V8 128 aa10.28□□□□□ -0.76
TPM3-208ENST00000341485 LINC00269Q8N2A0 174 aa10.28□□□□□ -0.76
TPM3-208ENST00000341485 PKD1L1Q8TDX9 2849 aa10.28□□□□□ -0.76
TPM3-208ENST00000341485 TRACP01848 142 aa10.27□□□□□ -0.76
TPM3-208ENST00000341485 TM2D3Q9BRN9 247 aa10.26□□□□□ -0.77
TPM3-208ENST00000341485 ANGP03950 147 aaKnown RBP10.25□□□□□ -0.77
TPM3-208ENST00000341485 CD164L2Q6UWJ8 174 aa10.25□□□□□ -0.77
TPM3-208ENST00000341485 SMIM11BQ8TCY0 68 aa10.25□□□□□ -0.77
TPM3-208ENST00000341485 CHCHD10Q8WYQ3 142 aaPredicted RBP10.25□□□□□ -0.77
TPM3-208ENST00000341485 IGLV10-54A0A075B6I4 117 aa10.24□□□□□ -0.77
TPM3-208ENST00000341485 REG3AQ06141 175 aa10.24□□□□□ -0.77
TPM3-208ENST00000341485 KIAA0087Q14695 138 aa10.24□□□□□ -0.77
TPM3-208ENST00000341485 MRPL23Q16540 153 aaKnown RBP10.24□□□□□ -0.77
TPM3-208ENST00000341485 Q6ZTC4 211 aa10.24□□□□□ -0.77
TPM3-208ENST00000341485 C11orf45Q8TAV5 145 aa10.24□□□□□ -0.77
TPM3-208ENST00000341485 C22orf24Q9Y442 160 aa10.22□□□□□ -0.77
TPM3-208ENST00000341485 BAALC-AS2P0C853 105 aa10.22□□□□□ -0.77
TPM3-208ENST00000341485 NANOS2P60321 138 aaKnown RBP10.22□□□□□ -0.77
TPM3-208ENST00000341485 CKS1BP61024 79 aa10.21□□□□□ -0.77
TPM3-208ENST00000341485 Q9HAA7 133 aa10.21□□□□□ -0.78
TPM3-208ENST00000341485 FAM240AA0A1B0GVK7 77 aa10.2□□□□□ -0.78
TPM3-208ENST00000341485 LELP1Q5T871 98 aa10.2□□□□□ -0.78
TPM3-208ENST00000341485 A0A087WYN8 130 aa10.19□□□□□ -0.78
TPM3-208ENST00000341485 SNCGO76070 127 aa10.19□□□□□ -0.78
TPM3-208ENST00000341485 CFAP161Q6P656 301 aa10.19□□□□□ -0.78
TPM3-208ENST00000341485 C15orf53Q8NAA6 179 aa10.19□□□□□ -0.78
TPM3-208ENST00000341485 A0A1B0GV72 72 aa10.19□□□□□ -0.78
TPM3-208ENST00000341485 MALP21145 153 aa10.19□□□□□ -0.78
TPM3-208ENST00000341485 OR13C6PQ8NH95 151 aa10.19□□□□□ -0.78
TPM3-208ENST00000341485 CXCL5P42830 114 aa10.18□□□□□ -0.78
TPM3-208ENST00000341485 DEFB131BA0A096LNP1 70 aa10.18□□□□□ -0.78
TPM3-208ENST00000341485 H0YGX0 51 aa10.17□□□□□ -0.78
TPM3-208ENST00000341485 H3BNG1 76 aa10.17□□□□□ -0.78
TPM3-208ENST00000341485 NOTCH1P46531 2555 aa10.16□□□□□ -0.78
TPM3-208ENST00000341485 COX17Q14061 63 aa10.16□□□□□ -0.78
TPM3-208ENST00000341485 C9orf116Q5BN46 136 aaPredicted RBP10.16□□□□□ -0.78
TPM3-208ENST00000341485 TTC32Q5I0X7 151 aa10.16□□□□□ -0.78
TPM3-208ENST00000341485 PRR3P79522 188 aaKnown RBP10.14□□□□□ -0.79
TPM3-208ENST00000341485 PRR34Q9NV39 138 aa10.14□□□□□ -0.79
TPM3-208ENST00000341485 TRAV10A0A0B4J240 114 aa10.14□□□□□ -0.79
TPM3-208ENST00000341485 GAGE2BQ13066 116 aa10.14□□□□□ -0.79
TPM3-208ENST00000341485 GAGE2EQ4V326 116 aa10.14□□□□□ -0.79
TPM3-208ENST00000341485 B9D2Q9BPU9 175 aa10.14□□□□□ -0.79
TPM3-208ENST00000341485 GAGE2DQ9UEU5 116 aa10.14□□□□□ -0.79
TPM3-208ENST00000341485 KLK12Q9UKR0 248 aa10.14□□□□□ -0.79
TPM3-208ENST00000341485 KLK5Q9Y337 293 aaPredicted RBP10.14□□□□□ -0.79
TPM3-208ENST00000341485 DNAL4O96015 105 aa10.13□□□□□ -0.79
TPM3-208ENST00000341485 LYPD5Q6UWN5 251 aa10.13□□□□□ -0.79
TPM3-208ENST00000341485 MGAM2Q2M2H8 2515 aa10.13□□□□□ -0.79
TPM3-208ENST00000341485 LECT2O14960 151 aa10.13□□□□□ -0.79
TPM3-208ENST00000341485 NDUFC2O95298 119 aa10.13□□□□□ -0.79
TPM3-208ENST00000341485 ENHOQ6UWT2 76 aa10.13□□□□□ -0.79
TPM3-208ENST00000341485 C6orf223Q8N319 242 aa10.13□□□□□ -0.79
TPM3-208ENST00000341485 SPAG11BQ08648 103 aa10.12□□□□□ -0.79
TPM3-208ENST00000341485 C10orf25Q5T742 122 aa10.12□□□□□ -0.79
TPM3-208ENST00000341485 Q6Q795 121 aa10.12□□□□□ -0.79
TPM3-208ENST00000341485 ACYP1P07311 99 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms