RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 DEFB113Q30KQ7 82 aa11.3□□□□□ -0.6
SCARB1-202ENST00000339570 LINC01600Q96MT4 127 aa11.3□□□□□ -0.6
SCARB1-202ENST00000339570 RPL28P46779 137 aaKnown RBP11.29□□□□□ -0.6
SCARB1-202ENST00000339570 FSHBP01225 129 aa11.29□□□□□ -0.6
SCARB1-202ENST00000339570 A0A1B0GX51 115 aa11.28□□□□□ -0.6
SCARB1-202ENST00000339570 CXCL5P42830 114 aa11.28□□□□□ -0.6
SCARB1-202ENST00000339570 LRRC75A-AS1Q8N1F1 130 aa11.28□□□□□ -0.6
SCARB1-202ENST00000339570 CSDC2Q9Y534 153 aaKnown RBP11.28□□□□□ -0.6
SCARB1-202ENST00000339570 PLAC8L1A1L4L8 177 aa11.27□□□□□ -0.6
SCARB1-202ENST00000339570 C3orf22Q8N5N4 141 aa11.27□□□□□ -0.6
SCARB1-202ENST00000339570 HECTD1Q9ULT8 2610 aa11.27□□□□□ -0.61
SCARB1-202ENST00000339570 IGHV3OR16-9A0A0B4J2B5 98 aa11.27□□□□□ -0.61
SCARB1-202ENST00000339570 HTN3P15516 51 aa11.27□□□□□ -0.61
SCARB1-202ENST00000339570 CYSTM1Q9H1C7 97 aa11.27□□□□□ -0.61
SCARB1-202ENST00000339570 CFAP161Q6P656 301 aa11.26□□□□□ -0.61
SCARB1-202ENST00000339570 C16orf74Q96GX8 76 aa11.26□□□□□ -0.61
SCARB1-202ENST00000339570 UBR5O95071 2799 aaPredicted RBP11.26□□□□□ -0.61
SCARB1-202ENST00000339570 ATRQ13535 2644 aa11.26□□□□□ -0.61
SCARB1-202ENST00000339570 FHL2Q14192 279 aa11.26□□□□□ -0.61
SCARB1-202ENST00000339570 IL17DQ8TAD2 202 aa11.26□□□□□ -0.61
SCARB1-202ENST00000339570 LINC00959A0A1B0GUT2 108 aa11.25□□□□□ -0.61
SCARB1-202ENST00000339570 HILS1P60008 231 aa11.25□□□□□ -0.61
SCARB1-202ENST00000339570 UNC79Q9P2D8 2635 aa11.25□□□□□ -0.61
SCARB1-202ENST00000339570 LINC00482Q8N8I6 264 aa11.24□□□□□ -0.61
SCARB1-202ENST00000339570 LINC00269Q8N2A0 174 aa11.23□□□□□ -0.61
SCARB1-202ENST00000339570 TRBV6-4A0A1B0GX49 114 aa11.22□□□□□ -0.61
SCARB1-202ENST00000339570 FAM110AQ9BQ89 295 aa11.22□□□□□ -0.61
SCARB1-202ENST00000339570 LINC01006Q8NI28 216 aa11.22□□□□□ -0.61
SCARB1-202ENST00000339570 HELZ2Q9BYK8 2649 aaKnown RBP11.21□□□□□ -0.61
SCARB1-202ENST00000339570 UQCRQO14949 82 aa11.21□□□□□ -0.61
SCARB1-202ENST00000339570 ANGP03950 147 aaKnown RBP11.21□□□□□ -0.61
SCARB1-202ENST00000339570 A0A087WZ39 114 aa11.21□□□□□ -0.62
SCARB1-202ENST00000339570 TMEM86BQ8N661 226 aa11.21□□□□□ -0.62
SCARB1-202ENST00000339570 TRAV23DV6A0A075B6W5 121 aa11.2□□□□□ -0.62
SCARB1-202ENST00000339570 ORMDL1Q9P0S3 153 aa11.2□□□□□ -0.62
SCARB1-202ENST00000339570 TEP1Q99973 2627 aaKnown RBP11.2□□□□□ -0.62
SCARB1-202ENST00000339570 IBA57-AS1B1ANH7 110 aa11.2□□□□□ -0.62
SCARB1-202ENST00000339570 SS18Q15532 418 aa11.2□□□□□ -0.62
SCARB1-202ENST00000339570 IMUPQ9GZP8 106 aa11.2□□□□□ -0.62
SCARB1-202ENST00000339570 TENM4Q6N022 2769 aa11.2□□□□□ -0.62
SCARB1-202ENST00000339570 PF4P02776 101 aa11.2□□□□□ -0.62
SCARB1-202ENST00000339570 TRAV25A0A0B4J276 109 aa11.19□□□□□ -0.62
SCARB1-202ENST00000339570 H0YGX0 51 aa11.19□□□□□ -0.62
SCARB1-202ENST00000339570 FAM222AQ5U5X8 452 aa11.19□□□□□ -0.62
SCARB1-202ENST00000339570 KIR2DL5BQ8NHK3 375 aa11.19□□□□□ -0.62
SCARB1-202ENST00000339570 COX7CP15954 63 aa11.18□□□□□ -0.62
SCARB1-202ENST00000339570 FAM19A3Q7Z5A8 133 aa11.18□□□□□ -0.62
SCARB1-202ENST00000339570 TENM1Q9UKZ4 2725 aa11.18□□□□□ -0.62
SCARB1-202ENST00000339570 C6orf223Q8N319 242 aa11.18□□□□□ -0.62
SCARB1-202ENST00000339570 TMEM126AQ9H061 195 aa11.18□□□□□ -0.62
SCARB1-202ENST00000339570 FAM19A1Q7Z5A9 133 aa11.17□□□□□ -0.62
SCARB1-202ENST00000339570 C6orf99Q4VX62 202 aa11.17□□□□□ -0.62
SCARB1-202ENST00000339570 S100A7L2Q5SY68 101 aa11.17□□□□□ -0.62
SCARB1-202ENST00000339570 ENHOQ6UWT2 76 aa11.16□□□□□ -0.62
SCARB1-202ENST00000339570 SMR3AQ99954 134 aa11.16□□□□□ -0.62
SCARB1-202ENST00000339570 DEFB135Q30KP9 77 aa11.15□□□□□ -0.62
SCARB1-202ENST00000339570 CSNK1G2-AS1Q8NCQ2 148 aa11.15□□□□□ -0.62
SCARB1-202ENST00000339570 DSCR8Q96T75 97 aa11.15□□□□□ -0.62
SCARB1-202ENST00000339570 HIVEP1P15822 2718 aa11.15□□□□□ -0.62
SCARB1-202ENST00000339570 PDZD2O15018 2839 aa11.15□□□□□ -0.62
SCARB1-202ENST00000339570 USP17L23D6RBM5 183 aa11.15□□□□□ -0.62
SCARB1-202ENST00000339570 LINC01561Q8N1V8 128 aa11.14□□□□□ -0.63
SCARB1-202ENST00000339570 ATOX1O00244 68 aa11.14□□□□□ -0.63
SCARB1-202ENST00000339570 RPL18AQ02543 176 aaKnown RBP11.14□□□□□ -0.63
SCARB1-202ENST00000339570 C19orf73Q9NVV2 129 aa11.14□□□□□ -0.63
SCARB1-202ENST00000339570 LAMTOR3Q9UHA4 124 aa11.14□□□□□ -0.63
SCARB1-202ENST00000339570 OVOL2Q9BRP0 275 aa11.14□□□□□ -0.63
SCARB1-202ENST00000339570 Q8NDZ9 215 aa11.13□□□□□ -0.63
SCARB1-202ENST00000339570 SPATA3Q8NHX4 192 aa11.13□□□□□ -0.63
SCARB1-202ENST00000339570 PKD1L1Q8TDX9 2849 aa11.13□□□□□ -0.63
SCARB1-202ENST00000339570 IGLV1-51P01701 117 aa11.13□□□□□ -0.63
SCARB1-202ENST00000339570 TRRAPQ9Y4A5 3859 aa11.13□□□□□ -0.63
SCARB1-202ENST00000339570 CHCHD10Q8WYQ3 142 aaPredicted RBP11.12□□□□□ -0.63
SCARB1-202ENST00000339570 C2orf48Q96LS8 159 aa11.12□□□□□ -0.63
SCARB1-202ENST00000339570 F8P00451 2351 aa11.12□□□□□ -0.63
SCARB1-202ENST00000339570 C10orf25Q5T742 122 aa11.11□□□□□ -0.63
SCARB1-202ENST00000339570 KRTAP1-3Q8IUG1 177 aa11.11□□□□□ -0.63
SCARB1-202ENST00000339570 UNQ6190/PRO20217Q6UXQ8 127 aa11.11□□□□□ -0.63
SCARB1-202ENST00000339570 XAGE1AQ9HD64 81 aa11.11□□□□□ -0.63
SCARB1-202ENST00000339570 HAMPP81172 84 aa11.11□□□□□ -0.63
SCARB1-202ENST00000339570 Q8N814 137 aa11.1□□□□□ -0.63
SCARB1-202ENST00000339570 SCXQ7RTU7 201 aa11.1□□□□□ -0.63
SCARB1-202ENST00000339570 ZNF843Q8N446 348 aa11.1□□□□□ -0.63
SCARB1-202ENST00000339570 M0R2N4 97 aa11.09□□□□□ -0.63
SCARB1-202ENST00000339570 NANOS2P60321 138 aaKnown RBP11.09□□□□□ -0.63
SCARB1-202ENST00000339570 GHRHP01286 108 aa11.09□□□□□ -0.63
SCARB1-202ENST00000339570 REG3AQ06141 175 aa11.08□□□□□ -0.64
SCARB1-202ENST00000339570 FAM19A5Q7Z5A7 132 aaPredicted RBP11.08□□□□□ -0.64
SCARB1-202ENST00000339570 Q6JHZ5 121 aa11.07□□□□□ -0.64
SCARB1-202ENST00000339570 PRO0255Q9UI72 69 aa11.07□□□□□ -0.64
SCARB1-202ENST00000339570 CCKP06307 115 aa11.07□□□□□ -0.64
SCARB1-202ENST00000339570 KLK12Q9UKR0 248 aa11.07□□□□□ -0.64
SCARB1-202ENST00000339570 Q8IZM0 81 aa11.06□□□□□ -0.64
SCARB1-202ENST00000339570 C20orf197Q8N268 126 aa11.06□□□□□ -0.64
SCARB1-202ENST00000339570 SERP2Q8N6R1 65 aa11.05□□□□□ -0.64
SCARB1-202ENST00000339570 J3KT08 172 aa11.04□□□□□ -0.64
SCARB1-202ENST00000339570 SPAG11BQ08648 103 aa11.03□□□□□ -0.64
SCARB1-202ENST00000339570 DAD1P61803 113 aa11.03□□□□□ -0.64
SCARB1-202ENST00000339570 UBL5Q9BZL1 73 aa11.03□□□□□ -0.64
SCARB1-202ENST00000339570 Q6ZQY7 126 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms