RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 NOP10Q9NPE3 64 aaKnown RBP13.24□□□□□ -0.29
PSPC1-201ENST00000338910 TRRAPQ9Y4A5 3859 aa13.24□□□□□ -0.29
PSPC1-201ENST00000338910 ATOX1O00244 68 aa13.24□□□□□ -0.29
PSPC1-201ENST00000338910 SPATA3Q8NHX4 192 aa13.24□□□□□ -0.29
PSPC1-201ENST00000338910 TRAV13-2A0A0B4J235 113 aa13.23□□□□□ -0.29
PSPC1-201ENST00000338910 SMIM9A6NGZ8 99 aa13.23□□□□□ -0.29
PSPC1-201ENST00000338910 J3KT08 172 aa13.22□□□□□ -0.29
PSPC1-201ENST00000338910 LINC00337Q8N6G1 96 aa13.21□□□□□ -0.29
PSPC1-201ENST00000338910 CRPP02741 224 aa13.21□□□□□ -0.3
PSPC1-201ENST00000338910 CSNK1G2-AS1Q8NCQ2 148 aa13.21□□□□□ -0.3
PSPC1-201ENST00000338910 IGKV2-28A0A075B6P5 120 aa13.2□□□□□ -0.3
PSPC1-201ENST00000338910 IGKV2D-28P01615 120 aa13.2□□□□□ -0.3
PSPC1-201ENST00000338910 C9orf129Q5T035 196 aaKnown RBP13.2□□□□□ -0.3
PSPC1-201ENST00000338910 NTM-AS1Q6ZSK4 140 aa13.2□□□□□ -0.3
PSPC1-201ENST00000338910 CDC42SE2Q9NRR3 84 aa13.2□□□□□ -0.3
PSPC1-201ENST00000338910 DNAL4O96015 105 aa13.19□□□□□ -0.3
PSPC1-201ENST00000338910 OVOL2Q9BRP0 275 aa13.19□□□□□ -0.3
PSPC1-201ENST00000338910 PLAC8L1A1L4L8 177 aa13.19□□□□□ -0.3
PSPC1-201ENST00000338910 RPL18AQ02543 176 aaKnown RBP13.18□□□□□ -0.3
PSPC1-201ENST00000338910 A0A087WYN8 130 aa13.18□□□□□ -0.3
PSPC1-201ENST00000338910 hADV29S1A0JD25 119 aa13.18□□□□□ -0.3
PSPC1-201ENST00000338910 C16orf74Q96GX8 76 aa13.18□□□□□ -0.3
PSPC1-201ENST00000338910 OBSCN-AS1Q96MR7 158 aa13.18□□□□□ -0.3
PSPC1-201ENST00000338910 CYSTM1Q9H1C7 97 aa13.17□□□□□ -0.3
PSPC1-201ENST00000338910 C14orf132Q9NPU4 83 aa13.17□□□□□ -0.3
PSPC1-201ENST00000338910 BAHCC1Q9P281 2608 aa13.17□□□□□ -0.3
PSPC1-201ENST00000338910 RPS28P62857 69 aaKnown RBP13.17□□□□□ -0.3
PSPC1-201ENST00000338910 FAM19A5Q7Z5A7 132 aaPredicted RBP13.17□□□□□ -0.3
PSPC1-201ENST00000338910 TRGV2A0A075B6R0 118 aa13.16□□□□□ -0.3
PSPC1-201ENST00000338910 MIR7-3HGQ8N6C7 128 aa13.16□□□□□ -0.3
PSPC1-201ENST00000338910 SND1-IT1Q9HBX3 110 aa13.16□□□□□ -0.3
PSPC1-201ENST00000338910 Q6JHZ5 121 aa13.15□□□□□ -0.3
PSPC1-201ENST00000338910 SMIM11BQ8TCY0 68 aa13.15□□□□□ -0.3
PSPC1-201ENST00000338910 RPL36AP83881 106 aaKnown RBP13.15□□□□□ -0.3
PSPC1-201ENST00000338910 RPL36ALQ969Q0 106 aaKnown RBP13.15□□□□□ -0.3
PSPC1-201ENST00000338910 NBEAL2Q6ZNJ1 2754 aa13.15□□□□□ -0.3
PSPC1-201ENST00000338910 K7EQD1 137 aa13.14□□□□□ -0.31
PSPC1-201ENST00000338910 LINC00846Q9NV44 126 aa13.14□□□□□ -0.31
PSPC1-201ENST00000338910 IGKV3D-7A0A0C4DH55 119 aa13.13□□□□□ -0.31
PSPC1-201ENST00000338910 TRBV10-1A0A0K0K1A3 114 aa13.13□□□□□ -0.31
PSPC1-201ENST00000338910 H0YGX0 51 aa13.12□□□□□ -0.31
PSPC1-201ENST00000338910 C9orf66Q5T8R8 295 aa13.12□□□□□ -0.31
PSPC1-201ENST00000338910 COX7B2Q8TF08 81 aa13.12□□□□□ -0.31
PSPC1-201ENST00000338910 SERP2Q8N6R1 65 aa13.11□□□□□ -0.31
PSPC1-201ENST00000338910 UPK3BQ9BT76 320 aa13.11□□□□□ -0.31
PSPC1-201ENST00000338910 A0A087WVE0 104 aa13.09□□□□□ -0.31
PSPC1-201ENST00000338910 LOC100131303A0A0U1RQF7 123 aa13.09□□□□□ -0.31
PSPC1-201ENST00000338910 CCL18P55774 89 aa13.09□□□□□ -0.31
PSPC1-201ENST00000338910 LINC01561Q8N1V8 128 aa13.09□□□□□ -0.31
PSPC1-201ENST00000338910 TRGV4A0A0C4DH28 118 aa13.08□□□□□ -0.32
PSPC1-201ENST00000338910 LECT2O14960 151 aa13.08□□□□□ -0.32
PSPC1-201ENST00000338910 TMEM258P61165 79 aa13.08□□□□□ -0.32
PSPC1-201ENST00000338910 OR13C6PQ8NH95 151 aa13.08□□□□□ -0.32
PSPC1-201ENST00000338910 FBN1P35555 2871 aaKnown RBP13.08□□□□□ -0.32
PSPC1-201ENST00000338910 LINC00158P58513 81 aa13.08□□□□□ -0.32
PSPC1-201ENST00000338910 STAB1Q9NY15 2570 aa13.07□□□□□ -0.32
PSPC1-201ENST00000338910 DEFB130BP0DP73 79 aa13.07□□□□□ -0.32
PSPC1-201ENST00000338910 DEFB130AP0DP74 79 aa13.07□□□□□ -0.32
PSPC1-201ENST00000338910 TMEM243Q9BU79 118 aa13.07□□□□□ -0.32
PSPC1-201ENST00000338910 NCR3O14931 201 aa13.07□□□□□ -0.32
PSPC1-201ENST00000338910 TOMM7Q9P0U1 55 aa13.07□□□□□ -0.32
PSPC1-201ENST00000338910 UBE2L6O14933 153 aa13.06□□□□□ -0.32
PSPC1-201ENST00000338910 USP17L23D6RBM5 183 aa13.05□□□□□ -0.32
PSPC1-201ENST00000338910 DPH3Q96FX2 82 aa13.05□□□□□ -0.32
PSPC1-201ENST00000338910 F8WDY8 70 aa13.05□□□□□ -0.32
PSPC1-201ENST00000338910 KIR2DL5BQ8NHK3 375 aa13.04□□□□□ -0.32
PSPC1-201ENST00000338910 MRAPQ8TCY5 172 aa13.04□□□□□ -0.32
PSPC1-201ENST00000338910 TRBV6-4A0A1B0GX49 114 aa13.04□□□□□ -0.32
PSPC1-201ENST00000338910 CYSRT1A8MQ03 144 aa13.04□□□□□ -0.32
PSPC1-201ENST00000338910 FHL2Q14192 279 aa13.04□□□□□ -0.32
PSPC1-201ENST00000338910 SS18Q15532 418 aa13.04□□□□□ -0.32
PSPC1-201ENST00000338910 IBA57-AS1B1ANH7 110 aa13.03□□□□□ -0.32
PSPC1-201ENST00000338910 MAST4O15021 2626 aa13.02□□□□□ -0.32
PSPC1-201ENST00000338910 SLPIP03973 132 aa13.02□□□□□ -0.32
PSPC1-201ENST00000338910 KRTAP24-1Q3LI83 254 aa13.02□□□□□ -0.33
PSPC1-201ENST00000338910 WFDC9Q8NEX5 89 aa13.02□□□□□ -0.33
PSPC1-201ENST00000338910 X6R8D5 127 aa13.02□□□□□ -0.33
PSPC1-201ENST00000338910 IGHV3OR16-9A0A0B4J2B5 98 aa13.01□□□□□ -0.33
PSPC1-201ENST00000338910 PKD1L1Q8TDX9 2849 aa13.01□□□□□ -0.33
PSPC1-201ENST00000338910 CCKP06307 115 aa13□□□□□ -0.33
PSPC1-201ENST00000338910 ORMDL1Q9P0S3 153 aa13□□□□□ -0.33
PSPC1-201ENST00000338910 PAX4O43316 350 aa12.99□□□□□ -0.33
PSPC1-201ENST00000338910 OXTP01178 125 aa12.99□□□□□ -0.33
PSPC1-201ENST00000338910 PFN2P35080 140 aa12.99□□□□□ -0.33
PSPC1-201ENST00000338910 IGKV3OR2-268A0A0C4DH90 116 aa12.99□□□□□ -0.33
PSPC1-201ENST00000338910 DEFB135Q30KP9 77 aa12.99□□□□□ -0.33
PSPC1-201ENST00000338910 DSCR8Q96T75 97 aa12.98□□□□□ -0.33
PSPC1-201ENST00000338910 DEFB4AO15263 64 aa12.98□□□□□ -0.33
PSPC1-201ENST00000338910 IGLV4-60A0A075B6I1 120 aa12.97□□□□□ -0.33
PSPC1-201ENST00000338910 A0A087WZ39 114 aa12.97□□□□□ -0.33
PSPC1-201ENST00000338910 LINC00167Q96N53 147 aa12.96□□□□□ -0.34
PSPC1-201ENST00000338910 COL6A5A8TX70 2615 aa12.95□□□□□ -0.34
PSPC1-201ENST00000338910 LINC00612Q8N6U2 182 aa12.94□□□□□ -0.34
PSPC1-201ENST00000338910 S100A7L2Q5SY68 101 aa12.93□□□□□ -0.34
PSPC1-201ENST00000338910 TRBV6-8A0A0A6YYG3 113 aa12.93□□□□□ -0.34
PSPC1-201ENST00000338910 ATP5EP2Q5VTU8 51 aa12.93□□□□□ -0.34
PSPC1-201ENST00000338910 APOC4P55056 127 aa12.92□□□□□ -0.34
PSPC1-201ENST00000338910 OXLD1Q5BKU9 147 aa12.92□□□□□ -0.34
PSPC1-201ENST00000338910 JMJD7-PLA2G4BH0Y9G9 81 aa12.92□□□□□ -0.34
PSPC1-201ENST00000338910 GYPEP15421 78 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms