RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 FLNBO75369 2602 aaKnown RBP9.86□□□□□ -0.83
RTN4-202ENST00000337526 PRR3P79522 188 aaKnown RBP9.85□□□□□ -0.83
RTN4-202ENST00000337526 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.85□□□□□ -0.83
RTN4-202ENST00000337526 NDUFC2-KCTD14E9PQ53 114 aa9.85□□□□□ -0.83
RTN4-202ENST00000337526 Q8N814 137 aa9.84□□□□□ -0.83
RTN4-202ENST00000337526 RPL37AP8A6NKH3 93 aa9.84□□□□□ -0.83
RTN4-202ENST00000337526 A0A087WVE0 104 aa9.83□□□□□ -0.84
RTN4-202ENST00000337526 FHL2Q14192 279 aa9.83□□□□□ -0.84
RTN4-202ENST00000337526 A0A087WYN8 130 aa9.83□□□□□ -0.84
RTN4-202ENST00000337526 IL17DQ8TAD2 202 aa9.83□□□□□ -0.84
RTN4-202ENST00000337526 IGHV4-30-4P0DP06 118 aa9.83□□□□□ -0.84
RTN4-202ENST00000337526 PPDPFQ9H3Y8 114 aa9.82□□□□□ -0.84
RTN4-202ENST00000337526 WFDC13Q8IUB5 93 aa9.82□□□□□ -0.84
RTN4-202ENST00000337526 SPTSSBQ8NFR3 76 aa9.82□□□□□ -0.84
RTN4-202ENST00000337526 TRBV10-3A0A0K0K1G6 114 aa9.81□□□□□ -0.84
RTN4-202ENST00000337526 OXLD1Q5BKU9 147 aa9.81□□□□□ -0.84
RTN4-202ENST00000337526 EGFEM1PQ0D2K5 195 aa9.8□□□□□ -0.84
RTN4-202ENST00000337526 ATP5EP56381 51 aaPredicted RBP9.79□□□□□ -0.84
RTN4-202ENST00000337526 PRR4Q16378 134 aa9.79□□□□□ -0.84
RTN4-202ENST00000337526 F8P00451 2351 aa9.78□□□□□ -0.84
RTN4-202ENST00000337526 ANKRD17O75179 2603 aaKnown RBP9.78□□□□□ -0.84
RTN4-202ENST00000337526 LINC00315P59091 139 aa9.78□□□□□ -0.84
RTN4-202ENST00000337526 NANOS2P60321 138 aaKnown RBP9.78□□□□□ -0.84
RTN4-202ENST00000337526 LINC01546A6NGU7 62 aa9.78□□□□□ -0.84
RTN4-202ENST00000337526 SMR3AQ99954 134 aa9.78□□□□□ -0.84
RTN4-202ENST00000337526 PTPRBP23467 1997 aa9.77□□□□□ -0.84
RTN4-202ENST00000337526 A0A0U1RQV1 116 aa9.77□□□□□ -0.84
RTN4-202ENST00000337526 LOC107984640A0A0U1RRK4 108 aa9.77□□□□□ -0.85
RTN4-202ENST00000337526 TRAV7A0A075B6U4 112 aa9.76□□□□□ -0.85
RTN4-202ENST00000337526 A0A1B0GUV1 79 aa9.76□□□□□ -0.85
RTN4-202ENST00000337526 LRCOL1A6NCL2 159 aa9.76□□□□□ -0.85
RTN4-202ENST00000337526 SVIPQ8NHG7 77 aa9.76□□□□□ -0.85
RTN4-202ENST00000337526 CDIP1Q9H305 208 aa9.76□□□□□ -0.85
RTN4-202ENST00000337526 RANBP2P49792 3224 aaKnown RBP9.75□□□□□ -0.85
RTN4-202ENST00000337526 A0A0J9YWU9 116 aa9.75□□□□□ -0.85
RTN4-202ENST00000337526 LINC00337Q8N6G1 96 aa9.75□□□□□ -0.85
RTN4-202ENST00000337526 CELA1Q9UNI1 258 aa9.75□□□□□ -0.85
RTN4-202ENST00000337526 M0QXV9 152 aa9.75□□□□□ -0.85
RTN4-202ENST00000337526 SEC61GP60059 68 aa9.74□□□□□ -0.85
RTN4-202ENST00000337526 SPINK6Q6UWN8 80 aa9.73□□□□□ -0.85
RTN4-202ENST00000337526 CASC2Q6XLA1 102 aa9.72□□□□□ -0.85
RTN4-202ENST00000337526 Q8N3U1 123 aa9.72□□□□□ -0.85
RTN4-202ENST00000337526 C1orf137Q5JT78 98 aa9.72□□□□□ -0.85
RTN4-202ENST00000337526 C6orf223Q8N319 242 aa9.72□□□□□ -0.85
RTN4-202ENST00000337526 C11orf72Q8NBR9 251 aa9.72□□□□□ -0.85
RTN4-202ENST00000337526 LINC00846Q9NV44 126 aa9.72□□□□□ -0.85
RTN4-202ENST00000337526 FAM30AQ9NZY2 134 aa9.72□□□□□ -0.85
RTN4-202ENST00000337526 IGLV5-39A0A0G2JS06 123 aa9.72□□□□□ -0.85
RTN4-202ENST00000337526 HTTP42858 3142 aa9.71□□□□□ -0.85
RTN4-202ENST00000337526 V9GYY9 64 aa9.71□□□□□ -0.85
RTN4-202ENST00000337526 SMIM26A0A096LP01 95 aa9.71□□□□□ -0.86
RTN4-202ENST00000337526 SMCPP49901 116 aaPredicted RBP9.71□□□□□ -0.86
RTN4-202ENST00000337526 FAM19A4Q96LR4 140 aa9.71□□□□□ -0.86
RTN4-202ENST00000337526 RETNQ9HD89 108 aa9.71□□□□□ -0.86
RTN4-202ENST00000337526 Q6ZTC4 211 aa9.7□□□□□ -0.86
RTN4-202ENST00000337526 A8MTW9 85 aa9.7□□□□□ -0.86
RTN4-202ENST00000337526 IGHV3OR16-9A0A0B4J2B5 98 aa9.69□□□□□ -0.86
RTN4-202ENST00000337526 M0R2N4 97 aa9.69□□□□□ -0.86
RTN4-202ENST00000337526 C16orf95Q9H693 158 aa9.69□□□□□ -0.86
RTN4-202ENST00000337526 HRCT1Q6UXD1 115 aa9.68□□□□□ -0.86
RTN4-202ENST00000337526 Q8N2B8 174 aa9.68□□□□□ -0.86
RTN4-202ENST00000337526 LINC00575Q6W349 94 aa9.68□□□□□ -0.86
RTN4-202ENST00000337526 PRO0461Q9UI25 63 aa9.68□□□□□ -0.86
RTN4-202ENST00000337526 Q8N9L7 120 aa9.67□□□□□ -0.86
RTN4-202ENST00000337526 PLAC8L1A1L4L8 177 aa9.67□□□□□ -0.86
RTN4-202ENST00000337526 USP24Q9UPU5 2620 aa9.67□□□□□ -0.86
RTN4-202ENST00000337526 IGLV9-49A0A0B4J1Y8 123 aa9.67□□□□□ -0.86
RTN4-202ENST00000337526 Q9UF83 564 aa9.66□□□□□ -0.86
RTN4-202ENST00000337526 MRPL55Q7Z7F7 128 aaKnown RBP9.66□□□□□ -0.86
RTN4-202ENST00000337526 ZNF706Q9Y5V0 76 aaPredicted RBP9.66□□□□□ -0.86
RTN4-202ENST00000337526 CHD7Q9P2D1 2997 aa9.66□□□□□ -0.86
RTN4-202ENST00000337526 LINC01561Q8N1V8 128 aa9.66□□□□□ -0.86
RTN4-202ENST00000337526 Q6ZVQ6 151 aa9.65□□□□□ -0.86
RTN4-202ENST00000337526 C7orf33Q8WU49 177 aa9.65□□□□□ -0.86
RTN4-202ENST00000337526 TRBV7-7A0A0K0K1E9 115 aa9.65□□□□□ -0.86
RTN4-202ENST00000337526 SERP1Q9Y6X1 66 aa9.65□□□□□ -0.86
RTN4-202ENST00000337526 COL4A2P08572 1712 aa9.64□□□□□ -0.87
RTN4-202ENST00000337526 LYPD5Q6UWN5 251 aa9.64□□□□□ -0.87
RTN4-202ENST00000337526 LINC00208Q96KT6 92 aa9.64□□□□□ -0.87
RTN4-202ENST00000337526 MKI67P46013 3256 aaKnown RBP9.64□□□□□ -0.87
RTN4-202ENST00000337526 LINC00474Q9P2X8 69 aa9.64□□□□□ -0.87
RTN4-202ENST00000337526 A6NED7 52 aa9.63□□□□□ -0.87
RTN4-202ENST00000337526 SOSTDC1Q6X4U4 206 aa9.63□□□□□ -0.87
RTN4-202ENST00000337526 C10orf25Q5T742 122 aa9.62□□□□□ -0.87
RTN4-202ENST00000337526 REG3GQ6UW15 175 aa9.62□□□□□ -0.87
RTN4-202ENST00000337526 C2orf48Q96LS8 159 aa9.62□□□□□ -0.87
RTN4-202ENST00000337526 IGLV5-45A0A087WSX0 123 aa9.62□□□□□ -0.87
RTN4-202ENST00000337526 Q6ZRU5 148 aa9.61□□□□□ -0.87
RTN4-202ENST00000337526 LINC01547P58512 204 aaPredicted RBP9.61□□□□□ -0.87
RTN4-202ENST00000337526 PRYO14603 147 aa9.6□□□□□ -0.87
RTN4-202ENST00000337526 A0A087WSZ3 146 aa9.59□□□□□ -0.87
RTN4-202ENST00000337526 TMEM254Q8TBM7 123 aa9.58□□□□□ -0.88
RTN4-202ENST00000337526 CHD9Q3L8U1 2897 aa9.58□□□□□ -0.88
RTN4-202ENST00000337526 BRCA2P51587 3418 aa9.57□□□□□ -0.88
RTN4-202ENST00000337526 F8WDY8 70 aa9.57□□□□□ -0.88
RTN4-202ENST00000337526 FAM218AQ96MZ4 157 aa9.57□□□□□ -0.88
RTN4-202ENST00000337526 HECTD1Q9ULT8 2610 aa9.56□□□□□ -0.88
RTN4-202ENST00000337526 SBSPONQ8IVN8 264 aa9.56□□□□□ -0.88
RTN4-202ENST00000337526 PRR15LQ9BU68 103 aa9.56□□□□□ -0.88
RTN4-202ENST00000337526 BPTFQ12830 3046 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms