RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 TLX1NBP0CAT3 122 aa9.26□□□□□ -0.93
KATNA1-201ENST00000335643 HERVK_113P63121 156 aa9.26□□□□□ -0.93
KATNA1-201ENST00000335643 PMCHL1Q16048 86 aa9.26□□□□□ -0.93
KATNA1-201ENST00000335643 SMCO4Q9NRQ5 59 aa9.26□□□□□ -0.93
KATNA1-201ENST00000335643 TOMM7Q9P0U1 55 aa9.26□□□□□ -0.93
KATNA1-201ENST00000335643 OXTP01178 125 aa9.25□□□□□ -0.93
KATNA1-201ENST00000335643 KRTAP7-1Q8IUC3 87 aa9.25□□□□□ -0.93
KATNA1-201ENST00000335643 CST9LQ9H4G1 147 aa9.25□□□□□ -0.93
KATNA1-201ENST00000335643 GAGE2EQ4V326 116 aa9.24□□□□□ -0.93
KATNA1-201ENST00000335643 PHF5AQ7RTV0 110 aaKnown RBP9.24□□□□□ -0.93
KATNA1-201ENST00000335643 CBLN2Q8IUK8 224 aa9.24□□□□□ -0.93
KATNA1-201ENST00000335643 GEMIN7Q9H840 131 aaKnown RBP9.24□□□□□ -0.93
KATNA1-201ENST00000335643 GAGE2DQ9UEU5 116 aa9.24□□□□□ -0.93
KATNA1-201ENST00000335643 TRBV30A0A0K0K1B3 111 aa9.24□□□□□ -0.93
KATNA1-201ENST00000335643 SMIM1B2RUZ4 78 aa9.24□□□□□ -0.93
KATNA1-201ENST00000335643 LINC00614P0C842 121 aa9.24□□□□□ -0.93
KATNA1-201ENST00000335643 SEC11AP67812 179 aa9.24□□□□□ -0.93
KATNA1-201ENST00000335643 Q8IZM0 81 aa9.24□□□□□ -0.93
KATNA1-201ENST00000335643 IGLV5-45A0A087WSX0 123 aa9.23□□□□□ -0.93
KATNA1-201ENST00000335643 TINCRA0A1B0GVN0 87 aa9.23□□□□□ -0.93
KATNA1-201ENST00000335643 KRTAP11-1Q8IUC1 163 aa9.23□□□□□ -0.93
KATNA1-201ENST00000335643 LINC00469Q8N7U9 141 aa9.23□□□□□ -0.93
KATNA1-201ENST00000335643 LINC01549A6NIU2 74 aa9.22□□□□□ -0.93
KATNA1-201ENST00000335643 PRSS2P07478 247 aa9.22□□□□□ -0.93
KATNA1-201ENST00000335643 MT1HL1P0DM35 61 aa9.22□□□□□ -0.93
KATNA1-201ENST00000335643 PMVKQ15126 192 aa9.22□□□□□ -0.93
KATNA1-201ENST00000335643 C9orf129Q5T035 196 aaKnown RBP9.22□□□□□ -0.93
KATNA1-201ENST00000335643 NDUFC2-KCTD14E9PQ53 114 aa9.21□□□□□ -0.93
KATNA1-201ENST00000335643 C6orf226Q5I0X4 101 aa9.21□□□□□ -0.93
KATNA1-201ENST00000335643 PACRGQ96M98 296 aaPredicted RBP9.21□□□□□ -0.93
KATNA1-201ENST00000335643 HBDP02042 147 aa9.2□□□□□ -0.94
KATNA1-201ENST00000335643 CKS1BP61024 79 aa9.2□□□□□ -0.94
KATNA1-201ENST00000335643 PDZD11Q5EBL8 140 aa9.2□□□□□ -0.94
KATNA1-201ENST00000335643 FAM19A5Q7Z5A7 132 aaPredicted RBP9.2□□□□□ -0.94
KATNA1-201ENST00000335643 PSORS1C2Q9UIG4 136 aa9.2□□□□□ -0.94
KATNA1-201ENST00000335643 SPINK8P0C7L1 97 aa9.2□□□□□ -0.94
KATNA1-201ENST00000335643 SRSF9Q13242 221 aaKnown RBP eCLIP9.19□□□□□ -0.94
KATNA1-201ENST00000335643 F8VRH5 84 aa9.17□□□□□ -0.94
KATNA1-201ENST00000335643 IGLC3P0DOY3 106 aa9.17□□□□□ -0.94
KATNA1-201ENST00000335643 NDUFA6P56556 154 aa9.17□□□□□ -0.94
KATNA1-201ENST00000335643 COX7B2Q8TF08 81 aa9.17□□□□□ -0.94
KATNA1-201ENST00000335643 ZNF22P17026 224 aaPredicted RBP9.16□□□□□ -0.94
KATNA1-201ENST00000335643 SERTAD4-AS1Q5TG53 156 aa9.16□□□□□ -0.94
KATNA1-201ENST00000335643 XAGE1AQ9HD64 81 aa9.16□□□□□ -0.94
KATNA1-201ENST00000335643 M0QXV9 152 aa9.15□□□□□ -0.95
KATNA1-201ENST00000335643 RAB5BP61020 215 aa9.15□□□□□ -0.95
KATNA1-201ENST00000335643 SPINK6Q6UWN8 80 aa9.15□□□□□ -0.95
KATNA1-201ENST00000335643 TRGC2P03986 189 aa9.14□□□□□ -0.95
KATNA1-201ENST00000335643 CXCL5P42830 114 aa9.14□□□□□ -0.95
KATNA1-201ENST00000335643 C1orf137Q5JT78 98 aa9.14□□□□□ -0.95
KATNA1-201ENST00000335643 C11orf86A6NJI1 115 aa9.13□□□□□ -0.95
KATNA1-201ENST00000335643 ODF1Q14990 250 aa9.13□□□□□ -0.95
KATNA1-201ENST00000335643 BAGE3Q86Y29 109 aa9.13□□□□□ -0.95
KATNA1-201ENST00000335643 IGLV5-39A0A0G2JS06 123 aa9.12□□□□□ -0.95
KATNA1-201ENST00000335643 ATP5LO75964 103 aa9.12□□□□□ -0.95
KATNA1-201ENST00000335643 LINC00310P59036 64 aa9.12□□□□□ -0.95
KATNA1-201ENST00000335643 CHCHD1Q96BP2 118 aaKnown RBP9.12□□□□□ -0.95
KATNA1-201ENST00000335643 LINC01600Q96MT4 127 aa9.12□□□□□ -0.95
KATNA1-201ENST00000335643 FAM19A2Q8N3H0 131 aa9.12□□□□□ -0.95
KATNA1-201ENST00000335643 H3BRM9 83 aa9.11□□□□□ -0.95
KATNA1-201ENST00000335643 UBR4Q5T4S7 5183 aa9.1□□□□□ -0.95
KATNA1-201ENST00000335643 COLCA2A8K830 154 aa9.1□□□□□ -0.95
KATNA1-201ENST00000335643 C22orf24Q9Y442 160 aa9.1□□□□□ -0.95
KATNA1-201ENST00000335643 IGLV7-43P04211 117 aa9.09□□□□□ -0.95
KATNA1-201ENST00000335643 UBE2BP63146 152 aa9.08□□□□□ -0.96
KATNA1-201ENST00000335643 IFI27L1Q96BM0 104 aa9.08□□□□□ -0.96
KATNA1-201ENST00000335643 CHTOPQ9Y3Y2 248 aaKnown RBP9.08□□□□□ -0.96
KATNA1-201ENST00000335643 NUPR1O60356 82 aa9.07□□□□□ -0.96
KATNA1-201ENST00000335643 TMEM170BQ5T4T1 132 aa9.07□□□□□ -0.96
KATNA1-201ENST00000335643 HSBP1O75506 76 aa9.07□□□□□ -0.96
KATNA1-201ENST00000335643 SERF1AO75920 110 aa9.07□□□□□ -0.96
KATNA1-201ENST00000335643 TRAV12-1A0A0B4J245 112 aa9.06□□□□□ -0.96
KATNA1-201ENST00000335643 SCO1O75880 301 aa9.06□□□□□ -0.96
KATNA1-201ENST00000335643 KRTAP10-8P60410 259 aa9.06□□□□□ -0.96
KATNA1-201ENST00000335643 REG3GQ6UW15 175 aa9.06□□□□□ -0.96
KATNA1-201ENST00000335643 PFN2P35080 140 aa9.05□□□□□ -0.96
KATNA1-201ENST00000335643 ZNF625Q96I27 306 aaPredicted RBP9.05□□□□□ -0.96
KATNA1-201ENST00000335643 TMEM223A0PJW6 202 aa9.04□□□□□ -0.96
KATNA1-201ENST00000335643 MRPL55Q7Z7F7 128 aaKnown RBP9.03□□□□□ -0.96
KATNA1-201ENST00000335643 TP73-AS1Q9UF72 201 aa9.03□□□□□ -0.96
KATNA1-201ENST00000335643 ERG28Q9UKR5 140 aa9.03□□□□□ -0.96
KATNA1-201ENST00000335643 PLA2G2DQ9UNK4 145 aa9.03□□□□□ -0.96
KATNA1-201ENST00000335643 LRP2P98164 4655 aa9.03□□□□□ -0.96
KATNA1-201ENST00000335643 H0Y8G0 127 aa9.02□□□□□ -0.97
KATNA1-201ENST00000335643 H0Y9J4 135 aa9.02□□□□□ -0.97
KATNA1-201ENST00000335643 Q8NDZ9 215 aa9.02□□□□□ -0.97
KATNA1-201ENST00000335643 LINC00167Q96N53 147 aa9.02□□□□□ -0.97
KATNA1-201ENST00000335643 RPL37AP8A6NKH3 93 aa9.01□□□□□ -0.97
KATNA1-201ENST00000335643 GAGE10A6NGK3 116 aa9□□□□□ -0.97
KATNA1-201ENST00000335643 LEPROTL1O95214 131 aa9□□□□□ -0.97
KATNA1-201ENST00000335643 LBHQ53QV2 105 aaPredicted RBP9□□□□□ -0.97
KATNA1-201ENST00000335643 DIRC1Q969H9 104 aa9□□□□□ -0.97
KATNA1-201ENST00000335643 SND1-IT1Q9HBX3 110 aa9□□□□□ -0.97
KATNA1-201ENST00000335643 IGLV5-37A0A075B6J1 123 aa8.99□□□□□ -0.97
KATNA1-201ENST00000335643 KRTAP1-4P0C5Y4 121 aa8.99□□□□□ -0.97
KATNA1-201ENST00000335643 FABP4P15090 132 aa8.99□□□□□ -0.97
KATNA1-201ENST00000335643 PRR26Q8N8Z3 221 aa8.98□□□□□ -0.97
KATNA1-201ENST00000335643 VPREB1P12018 145 aa8.97□□□□□ -0.97
KATNA1-201ENST00000335643 COX17Q14061 63 aa8.97□□□□□ -0.97
KATNA1-201ENST00000335643 A0A0U1RRA0 63 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms