RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 NCR3O14931 201 aa8.49□□□□□ -1.05
HDAC6-201ENST00000334136 ADAMTSL4-AS1Q5T5F5 129 aa8.49□□□□□ -1.05
HDAC6-201ENST00000334136 SPANXCQ9NY87 97 aa8.48□□□□□ -1.05
HDAC6-201ENST00000334136 NIPBLQ6KC79 2804 aaeCLIP8.48□□□□□ -1.05
HDAC6-201ENST00000334136 C20orf197Q8N268 126 aa8.48□□□□□ -1.05
HDAC6-201ENST00000334136 RETNQ9HD89 108 aa8.48□□□□□ -1.05
HDAC6-201ENST00000334136 PRO0255Q9UI72 69 aa8.48□□□□□ -1.05
HDAC6-201ENST00000334136 FBN2P35556 2912 aa8.48□□□□□ -1.05
HDAC6-201ENST00000334136 NDUFA1O15239 70 aa8.47□□□□□ -1.05
HDAC6-201ENST00000334136 KLK5Q9Y337 293 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-201ENST00000334136 C3orf22Q8N5N4 141 aa8.47□□□□□ -1.05
HDAC6-201ENST00000334136 PYGO1Q9Y3Y4 419 aa8.47□□□□□ -1.05
HDAC6-201ENST00000334136 DEFB105AQ8NG35 78 aa8.46□□□□□ -1.05
HDAC6-201ENST00000334136 C9orf85Q96MD7 179 aa8.46□□□□□ -1.05
HDAC6-201ENST00000334136 PRO0461Q9UI25 63 aa8.46□□□□□ -1.05
HDAC6-201ENST00000334136 TIRAPP58753 221 aa8.46□□□□□ -1.06
HDAC6-201ENST00000334136 C1orf158Q8N1D5 194 aa8.46□□□□□ -1.06
HDAC6-201ENST00000334136 C1orf43Q9BWL3 253 aa8.46□□□□□ -1.06
HDAC6-201ENST00000334136 DEFB131BA0A096LNP1 70 aa8.46□□□□□ -1.06
HDAC6-201ENST00000334136 CCL18P55774 89 aa8.45□□□□□ -1.06
HDAC6-201ENST00000334136 MRPS36P82909 103 aaKnown RBP8.45□□□□□ -1.06
HDAC6-201ENST00000334136 UBE2D4Q9Y2X8 147 aa8.45□□□□□ -1.06
HDAC6-201ENST00000334136 TRBV10-1A0A0K0K1A3 114 aa8.45□□□□□ -1.06
HDAC6-201ENST00000334136 MUC4Q99102 2169 aa8.45□□□□□ -1.06
HDAC6-201ENST00000334136 JMJD7-PLA2G4BH0Y9G9 81 aa8.44□□□□□ -1.06
HDAC6-201ENST00000334136 A0A0J9YWU9 116 aa8.44□□□□□ -1.06
HDAC6-201ENST00000334136 ENHOQ6UWT2 76 aa8.42□□□□□ -1.06
HDAC6-201ENST00000334136 LINC00694P0DN24 101 aa8.42□□□□□ -1.06
HDAC6-201ENST00000334136 PSCAO43653 123 aa8.41□□□□□ -1.06
HDAC6-201ENST00000334136 NKAPP1Q8N9T2 125 aa8.41□□□□□ -1.06
HDAC6-201ENST00000334136 TRAV10A0A0B4J240 114 aa8.41□□□□□ -1.06
HDAC6-201ENST00000334136 TMEM256-PLSCR3K7ERE1 68 aa8.41□□□□□ -1.06
HDAC6-201ENST00000334136 RPL18AQ02543 176 aaKnown RBP8.41□□□□□ -1.06
HDAC6-201ENST00000334136 LOC100131303A0A0U1RQF7 123 aa8.4□□□□□ -1.06
HDAC6-201ENST00000334136 SCXQ7RTU7 201 aa8.4□□□□□ -1.06
HDAC6-201ENST00000334136 NF1P21359 2839 aa8.4□□□□□ -1.06
HDAC6-201ENST00000334136 A0A087WVE0 104 aa8.4□□□□□ -1.06
HDAC6-201ENST00000334136 USP17L23D6RBM5 183 aa8.4□□□□□ -1.06
HDAC6-201ENST00000334136 LINC00242Q5T6M2 205 aa8.4□□□□□ -1.06
HDAC6-201ENST00000334136 UPK3BQ9BT76 320 aa8.4□□□□□ -1.07
HDAC6-201ENST00000334136 NANOS2P60321 138 aaKnown RBP8.4□□□□□ -1.07
HDAC6-201ENST00000334136 SMIM11BQ8TCY0 68 aa8.4□□□□□ -1.07
HDAC6-201ENST00000334136 IMUPQ9GZP8 106 aa8.4□□□□□ -1.07
HDAC6-201ENST00000334136 TIMM17BO60830 172 aa8.39□□□□□ -1.07
HDAC6-201ENST00000334136 COX6A2Q02221 97 aa8.39□□□□□ -1.07
HDAC6-201ENST00000334136 Q6Q795 121 aa8.39□□□□□ -1.07
HDAC6-201ENST00000334136 KLK12Q9UKR0 248 aa8.39□□□□□ -1.07
HDAC6-201ENST00000334136 SPAG11BQ08648 103 aa8.39□□□□□ -1.07
HDAC6-201ENST00000334136 KIF25-AS1Q9Y6Z4 181 aa8.39□□□□□ -1.07
HDAC6-201ENST00000334136 NHLRC4P0CG21 123 aaPredicted RBP8.38□□□□□ -1.07
HDAC6-201ENST00000334136 COX7CP15954 63 aa8.38□□□□□ -1.07
HDAC6-201ENST00000334136 LINC00269Q8N2A0 174 aa8.38□□□□□ -1.07
HDAC6-201ENST00000334136 NBEAL1Q6ZS30 2694 aa8.38□□□□□ -1.07
HDAC6-201ENST00000334136 F8WEM9 126 aa8.38□□□□□ -1.07
HDAC6-201ENST00000334136 C6orf99Q4VX62 202 aa8.38□□□□□ -1.07
HDAC6-201ENST00000334136 PDZD2O15018 2839 aa8.38□□□□□ -1.07
HDAC6-201ENST00000334136 KRTAP10-11P60412 298 aa8.37□□□□□ -1.07
HDAC6-201ENST00000334136 LINC00526Q96FQ7 95 aa8.37□□□□□ -1.07
HDAC6-201ENST00000334136 CAMK2N2Q96S95 79 aa8.37□□□□□ -1.07
HDAC6-201ENST00000334136 M0QXV9 152 aa8.37□□□□□ -1.07
HDAC6-201ENST00000334136 SBSPONQ8IVN8 264 aa8.37□□□□□ -1.07
HDAC6-201ENST00000334136 Q6ZSN1 163 aa8.37□□□□□ -1.07
HDAC6-201ENST00000334136 FAM240AA0A1B0GVK7 77 aa8.36□□□□□ -1.07
HDAC6-201ENST00000334136 LINC01546A6NGU7 62 aa8.36□□□□□ -1.07
HDAC6-201ENST00000334136 TRBV6-4A0A1B0GX49 114 aa8.36□□□□□ -1.07
HDAC6-201ENST00000334136 LINC00315P59091 139 aa8.36□□□□□ -1.07
HDAC6-201ENST00000334136 IBA57-AS1B1ANH7 110 aa8.36□□□□□ -1.07
HDAC6-201ENST00000334136 SERP2Q8N6R1 65 aa8.36□□□□□ -1.07
HDAC6-201ENST00000334136 IGKV2D-24A0A075B6R9 120 aa8.36□□□□□ -1.07
HDAC6-201ENST00000334136 SMIM1B2RUZ4 78 aa8.36□□□□□ -1.07
HDAC6-201ENST00000334136 CXCL5P42830 114 aa8.36□□□□□ -1.07
HDAC6-201ENST00000334136 NREPQ16612 68 aa8.36□□□□□ -1.07
HDAC6-201ENST00000334136 CHCHD7Q9BUK0 85 aa8.35□□□□□ -1.07
HDAC6-201ENST00000334136 XAGE1AQ9HD64 81 aa8.35□□□□□ -1.07
HDAC6-201ENST00000334136 Q9UF83 564 aa8.35□□□□□ -1.07
HDAC6-201ENST00000334136 TRBV6-8A0A0A6YYG3 113 aa8.35□□□□□ -1.07
HDAC6-201ENST00000334136 AMELXQ99217 191 aa8.35□□□□□ -1.07
HDAC6-201ENST00000334136 KPRPQ5T749 579 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-201ENST00000334136 K7EIL1 84 aa8.34□□□□□ -1.07
HDAC6-201ENST00000334136 LOC107984640A0A0U1RRK4 108 aa8.34□□□□□ -1.07
HDAC6-201ENST00000334136 TMEM258P61165 79 aa8.34□□□□□ -1.07
HDAC6-201ENST00000334136 Q6ZTC4 211 aa8.34□□□□□ -1.07
HDAC6-201ENST00000334136 CDC42SE2Q9NRR3 84 aa8.34□□□□□ -1.07
HDAC6-201ENST00000334136 RMI2Q96E14 147 aa8.33□□□□□ -1.08
HDAC6-201ENST00000334136 FAM19A4Q96LR4 140 aa8.33□□□□□ -1.08
HDAC6-201ENST00000334136 DIRC1Q969H9 104 aa8.33□□□□□ -1.08
HDAC6-201ENST00000334136 SNURFQ9Y675 71 aa8.33□□□□□ -1.08
HDAC6-201ENST00000334136 MXRA5Q9NR99 2828 aa8.33□□□□□ -1.08
HDAC6-201ENST00000334136 C19orf73Q9NVV2 129 aa8.32□□□□□ -1.08
HDAC6-201ENST00000334136 PRR3P79522 188 aaKnown RBP8.32□□□□□ -1.08
HDAC6-201ENST00000334136 EGFEM1PQ0D2K5 195 aa8.32□□□□□ -1.08
HDAC6-201ENST00000334136 A0A087WYN8 130 aa8.32□□□□□ -1.08
HDAC6-201ENST00000334136 C5orf47Q569G3 176 aa8.32□□□□□ -1.08
HDAC6-201ENST00000334136 BRK1Q8WUW1 75 aa8.32□□□□□ -1.08
HDAC6-201ENST00000334136 CHCHD10Q8WYQ3 142 aaPredicted RBP8.32□□□□□ -1.08
HDAC6-201ENST00000334136 HIGD2BQ4VC39 106 aa8.31□□□□□ -1.08
HDAC6-201ENST00000334136 PPDPFQ9H3Y8 114 aa8.31□□□□□ -1.08
HDAC6-201ENST00000334136 FAM236DA0A1B0GTK5 79 aa8.31□□□□□ -1.08
HDAC6-201ENST00000334136 FAM236CP0DP71 79 aa8.31□□□□□ -1.08
HDAC6-201ENST00000334136 REG3AQ06141 175 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms