RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 COX7A2LO14548 114 aa13.07□□□□□ -0.32
RFTN1-201ENST00000334133 SS18Q15532 418 aa13.07□□□□□ -0.32
RFTN1-201ENST00000334133 COPS9Q8WXC6 57 aa13.07□□□□□ -0.32
RFTN1-201ENST00000334133 ANGP03950 147 aaKnown RBP13.06□□□□□ -0.32
RFTN1-201ENST00000334133 CRPP02741 224 aa13.05□□□□□ -0.32
RFTN1-201ENST00000334133 Q9HAA7 133 aa13.05□□□□□ -0.32
RFTN1-201ENST00000334133 M0QXV9 152 aa13.05□□□□□ -0.32
RFTN1-201ENST00000334133 APOC4P55056 127 aa13.05□□□□□ -0.32
RFTN1-201ENST00000334133 CITED1Q99966 193 aa13.05□□□□□ -0.32
RFTN1-201ENST00000334133 LYRM9A8MSI8 78 aa13.05□□□□□ -0.32
RFTN1-201ENST00000334133 TRAV8-4A0A0B4J246 113 aa13.04□□□□□ -0.32
RFTN1-201ENST00000334133 H3BT86 120 aa13.04□□□□□ -0.32
RFTN1-201ENST00000334133 IGHV4-30-4P0DP06 118 aa13.04□□□□□ -0.32
RFTN1-201ENST00000334133 Q8NAQ8 132 aa13.03□□□□□ -0.32
RFTN1-201ENST00000334133 OR13C6PQ8NH95 151 aa13.02□□□□□ -0.32
RFTN1-201ENST00000334133 A0A1B0GUV1 79 aa13.02□□□□□ -0.33
RFTN1-201ENST00000334133 PRR3P79522 188 aaKnown RBP13.02□□□□□ -0.33
RFTN1-201ENST00000334133 SCGB1A1P11684 91 aa13.01□□□□□ -0.33
RFTN1-201ENST00000334133 OXLD1Q5BKU9 147 aa13.01□□□□□ -0.33
RFTN1-201ENST00000334133 LINC00526Q96FQ7 95 aa13.01□□□□□ -0.33
RFTN1-201ENST00000334133 C9orf116Q5BN46 136 aaPredicted RBP13.01□□□□□ -0.33
RFTN1-201ENST00000334133 IBA57-AS1B1ANH7 110 aa13□□□□□ -0.33
RFTN1-201ENST00000334133 ATP5G1P05496 136 aa13□□□□□ -0.33
RFTN1-201ENST00000334133 SMIM11BQ8TCY0 68 aa13□□□□□ -0.33
RFTN1-201ENST00000334133 CHCHD10Q8WYQ3 142 aaPredicted RBP13□□□□□ -0.33
RFTN1-201ENST00000334133 TRAV13-2A0A0B4J235 113 aa12.99□□□□□ -0.33
RFTN1-201ENST00000334133 RETNQ9HD89 108 aa12.99□□□□□ -0.33
RFTN1-201ENST00000334133 MAST4O15021 2626 aa12.99□□□□□ -0.33
RFTN1-201ENST00000334133 REG3AQ06141 175 aa12.99□□□□□ -0.33
RFTN1-201ENST00000334133 CKS1BP61024 79 aa12.98□□□□□ -0.33
RFTN1-201ENST00000334133 TENM3Q9P273 2699 aa12.98□□□□□ -0.33
RFTN1-201ENST00000334133 FBN1P35555 2871 aaKnown RBP12.98□□□□□ -0.33
RFTN1-201ENST00000334133 BAALC-AS2P0C853 105 aa12.97□□□□□ -0.33
RFTN1-201ENST00000334133 TTC32Q5I0X7 151 aa12.97□□□□□ -0.33
RFTN1-201ENST00000334133 NOTCH1P46531 2555 aa12.97□□□□□ -0.33
RFTN1-201ENST00000334133 A0A087WYN8 130 aa12.97□□□□□ -0.33
RFTN1-201ENST00000334133 LINC01600Q96MT4 127 aa12.97□□□□□ -0.33
RFTN1-201ENST00000334133 MALP21145 153 aa12.96□□□□□ -0.33
RFTN1-201ENST00000334133 SPART-AS1P0CW21 52 aa12.96□□□□□ -0.33
RFTN1-201ENST00000334133 A0A1B0GV72 72 aa12.95□□□□□ -0.34
RFTN1-201ENST00000334133 MIFP14174 115 aa12.95□□□□□ -0.34
RFTN1-201ENST00000334133 RPL28P46779 137 aaKnown RBP12.95□□□□□ -0.34
RFTN1-201ENST00000334133 C15orf53Q8NAA6 179 aa12.95□□□□□ -0.34
RFTN1-201ENST00000334133 Q8IZM0 81 aa12.94□□□□□ -0.34
RFTN1-201ENST00000334133 SNCGO76070 127 aa12.94□□□□□ -0.34
RFTN1-201ENST00000334133 C6orf223Q8N319 242 aa12.94□□□□□ -0.34
RFTN1-201ENST00000334133 KLK12Q9UKR0 248 aa12.94□□□□□ -0.34
RFTN1-201ENST00000334133 CD164L2Q6UWJ8 174 aa12.93□□□□□ -0.34
RFTN1-201ENST00000334133 ANK2Q01484 3957 aa12.93□□□□□ -0.34
RFTN1-201ENST00000334133 KIAA0087Q14695 138 aa12.93□□□□□ -0.34
RFTN1-201ENST00000334133 CFAP161Q6P656 301 aa12.92□□□□□ -0.34
RFTN1-201ENST00000334133 C22orf24Q9Y442 160 aa12.92□□□□□ -0.34
RFTN1-201ENST00000334133 TRACP01848 142 aa12.91□□□□□ -0.34
RFTN1-201ENST00000334133 SLPIP03973 132 aa12.91□□□□□ -0.34
RFTN1-201ENST00000334133 MRPL23Q16540 153 aaKnown RBP12.91□□□□□ -0.34
RFTN1-201ENST00000334133 WFDC9Q8NEX5 89 aa12.91□□□□□ -0.34
RFTN1-201ENST00000334133 C9orf129Q5T035 196 aaKnown RBP12.9□□□□□ -0.35
RFTN1-201ENST00000334133 C10orf25Q5T742 122 aa12.9□□□□□ -0.35
RFTN1-201ENST00000334133 LECT2O14960 151 aa12.89□□□□□ -0.35
RFTN1-201ENST00000334133 KRTAP10-11P60412 298 aa12.89□□□□□ -0.35
RFTN1-201ENST00000334133 DNAL4O96015 105 aa12.87□□□□□ -0.35
RFTN1-201ENST00000334133 GAGE2BQ13066 116 aa12.87□□□□□ -0.35
RFTN1-201ENST00000334133 GAGE2EQ4V326 116 aa12.87□□□□□ -0.35
RFTN1-201ENST00000334133 UNQ6190/PRO20217Q6UXQ8 127 aa12.87□□□□□ -0.35
RFTN1-201ENST00000334133 GAGE2DQ9UEU5 116 aa12.87□□□□□ -0.35
RFTN1-201ENST00000334133 Q8NDZ9 215 aa12.87□□□□□ -0.35
RFTN1-201ENST00000334133 PPDPFQ9H3Y8 114 aa12.86□□□□□ -0.35
RFTN1-201ENST00000334133 DEFB121Q5J5C9 76 aa12.86□□□□□ -0.35
RFTN1-201ENST00000334133 NCR3O14931 201 aa12.85□□□□□ -0.35
RFTN1-201ENST00000334133 LELP1Q5T871 98 aa12.85□□□□□ -0.35
RFTN1-201ENST00000334133 SPAG11BQ08648 103 aa12.84□□□□□ -0.35
RFTN1-201ENST00000334133 COL6A5A8TX70 2615 aa12.83□□□□□ -0.36
RFTN1-201ENST00000334133 LYPD5Q6UWN5 251 aa12.83□□□□□ -0.36
RFTN1-201ENST00000334133 ENHOQ6UWT2 76 aa12.83□□□□□ -0.36
RFTN1-201ENST00000334133 Q6ZTC4 211 aa12.82□□□□□ -0.36
RFTN1-201ENST00000334133 WFDC10BQ8IUB3 73 aa12.82□□□□□ -0.36
RFTN1-201ENST00000334133 GAGE2AQ6NT46 116 aa12.82□□□□□ -0.36
RFTN1-201ENST00000334133 ANAPC13Q9BS18 74 aa12.82□□□□□ -0.36
RFTN1-201ENST00000334133 NANOS2P60321 138 aaKnown RBP12.81□□□□□ -0.36
RFTN1-201ENST00000334133 CYSRT1A8MQ03 144 aa12.81□□□□□ -0.36
RFTN1-201ENST00000334133 SMCR5Q8TEV8 140 aa12.81□□□□□ -0.36
RFTN1-201ENST00000334133 KRTAP24-1Q3LI83 254 aa12.81□□□□□ -0.36
RFTN1-201ENST00000334133 C14orf132Q9NPU4 83 aa12.81□□□□□ -0.36
RFTN1-201ENST00000334133 H0YGX0 51 aa12.79□□□□□ -0.36
RFTN1-201ENST00000334133 KPRPQ5T749 579 aaPredicted RBP12.79□□□□□ -0.36
RFTN1-201ENST00000334133 LINC01561Q8N1V8 128 aa12.78□□□□□ -0.36
RFTN1-201ENST00000334133 FAM240AA0A1B0GVK7 77 aa12.78□□□□□ -0.36
RFTN1-201ENST00000334133 WIPF1O43516 503 aa12.78□□□□□ -0.36
RFTN1-201ENST00000334133 HIGD2BQ4VC39 106 aa12.77□□□□□ -0.36
RFTN1-201ENST00000334133 NBEAL1Q6ZS30 2694 aa12.77□□□□□ -0.37
RFTN1-201ENST00000334133 CXCL5P42830 114 aa12.77□□□□□ -0.37
RFTN1-201ENST00000334133 XAGE1AQ9HD64 81 aa12.76□□□□□ -0.37
RFTN1-201ENST00000334133 PRB2P02812 416 aaPredicted RBP12.76□□□□□ -0.37
RFTN1-201ENST00000334133 PRR34Q9NV39 138 aa12.76□□□□□ -0.37
RFTN1-201ENST00000334133 C3orf56Q8N813 242 aa12.75□□□□□ -0.37
RFTN1-201ENST00000334133 NHLRC4P0CG21 123 aaPredicted RBP12.75□□□□□ -0.37
RFTN1-201ENST00000334133 NDUFV3P56181 108 aaKnown RBP12.75□□□□□ -0.37
RFTN1-201ENST00000334133 COX17Q14061 63 aa12.75□□□□□ -0.37
RFTN1-201ENST00000334133 C6orf99Q4VX62 202 aa12.75□□□□□ -0.37
RFTN1-201ENST00000334133 S100A7L2Q5SY68 101 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms