RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 C9orf129Q5T035 196 aaKnown RBP13.3□□□□□ -0.28
LAMP1-201ENST00000332556 COPS9Q8WXC6 57 aa13.29□□□□□ -0.28
LAMP1-201ENST00000332556 GYPEP15421 78 aa13.29□□□□□ -0.28
LAMP1-201ENST00000332556 LINC00643Q86TS7 51 aa13.29□□□□□ -0.28
LAMP1-201ENST00000332556 OVOL2Q9BRP0 275 aa13.29□□□□□ -0.28
LAMP1-201ENST00000332556 TRBV6-4A0A1B0GX49 114 aa13.28□□□□□ -0.28
LAMP1-201ENST00000332556 IGKV2-28A0A075B6P5 120 aa13.28□□□□□ -0.28
LAMP1-201ENST00000332556 IGKV2D-28P01615 120 aa13.28□□□□□ -0.28
LAMP1-201ENST00000332556 CRPP02741 224 aa13.28□□□□□ -0.28
LAMP1-201ENST00000332556 FAM19A3Q7Z5A8 133 aa13.28□□□□□ -0.28
LAMP1-201ENST00000332556 CSDC2Q9Y534 153 aaKnown RBP13.28□□□□□ -0.28
LAMP1-201ENST00000332556 FLNBO75369 2602 aaKnown RBP13.28□□□□□ -0.28
LAMP1-201ENST00000332556 A0A087WYN8 130 aa13.27□□□□□ -0.28
LAMP1-201ENST00000332556 TRBV6-8A0A0A6YYG3 113 aa13.27□□□□□ -0.28
LAMP1-201ENST00000332556 SND1-IT1Q9HBX3 110 aa13.27□□□□□ -0.29
LAMP1-201ENST00000332556 MALP21145 153 aa13.26□□□□□ -0.29
LAMP1-201ENST00000332556 PKD1L1Q8TDX9 2849 aa13.26□□□□□ -0.29
LAMP1-201ENST00000332556 ATP5G1P05496 136 aa13.26□□□□□ -0.29
LAMP1-201ENST00000332556 LINC00158P58513 81 aa13.26□□□□□ -0.29
LAMP1-201ENST00000332556 X6R8D5 127 aa13.26□□□□□ -0.29
LAMP1-201ENST00000332556 FAM110AQ9BQ89 295 aa13.26□□□□□ -0.29
LAMP1-201ENST00000332556 CMC4P56277 68 aaPredicted RBP13.25□□□□□ -0.29
LAMP1-201ENST00000332556 FAM222AQ5U5X8 452 aa13.25□□□□□ -0.29
LAMP1-201ENST00000332556 COX7B2Q8TF08 81 aa13.25□□□□□ -0.29
LAMP1-201ENST00000332556 IMUPQ9GZP8 106 aa13.25□□□□□ -0.29
LAMP1-201ENST00000332556 PFN2P35080 140 aa13.24□□□□□ -0.29
LAMP1-201ENST00000332556 XCL1P47992 114 aa13.24□□□□□ -0.29
LAMP1-201ENST00000332556 SMIM11BQ8TCY0 68 aa13.24□□□□□ -0.29
LAMP1-201ENST00000332556 C9orf153Q5TBE3 101 aa13.24□□□□□ -0.29
LAMP1-201ENST00000332556 C14orf132Q9NPU4 83 aa13.24□□□□□ -0.29
LAMP1-201ENST00000332556 TRAV13-2A0A0B4J235 113 aa13.23□□□□□ -0.29
LAMP1-201ENST00000332556 RPL28P46779 137 aaKnown RBP13.23□□□□□ -0.29
LAMP1-201ENST00000332556 HTN3P15516 51 aa13.22□□□□□ -0.29
LAMP1-201ENST00000332556 DNAL4O96015 105 aa13.21□□□□□ -0.29
LAMP1-201ENST00000332556 SDIM1Q6ZPB5 146 aa13.21□□□□□ -0.29
LAMP1-201ENST00000332556 KLK5Q9Y337 293 aaPredicted RBP13.21□□□□□ -0.29
LAMP1-201ENST00000332556 IGLV10-54A0A075B6I4 117 aa13.21□□□□□ -0.3
LAMP1-201ENST00000332556 CCL18P55774 89 aa13.21□□□□□ -0.3
LAMP1-201ENST00000332556 SLPIP03973 132 aa13.2□□□□□ -0.3
LAMP1-201ENST00000332556 INAFM2P0DMQ5 153 aa13.2□□□□□ -0.3
LAMP1-201ENST00000332556 C3orf22Q8N5N4 141 aa13.2□□□□□ -0.3
LAMP1-201ENST00000332556 CELA1Q9UNI1 258 aa13.19□□□□□ -0.3
LAMP1-201ENST00000332556 IGKV3D-7A0A0C4DH55 119 aa13.18□□□□□ -0.3
LAMP1-201ENST00000332556 OR13C6PQ8NH95 151 aa13.18□□□□□ -0.3
LAMP1-201ENST00000332556 LECT2O14960 151 aa13.18□□□□□ -0.3
LAMP1-201ENST00000332556 F8P00451 2351 aa13.17□□□□□ -0.3
LAMP1-201ENST00000332556 IGHV3OR16-9A0A0B4J2B5 98 aa13.17□□□□□ -0.3
LAMP1-201ENST00000332556 NCR3O14931 201 aa13.16□□□□□ -0.3
LAMP1-201ENST00000332556 PAX4O43316 350 aa13.16□□□□□ -0.3
LAMP1-201ENST00000332556 TMEM126AQ9H061 195 aa13.16□□□□□ -0.3
LAMP1-201ENST00000332556 LINC00959A0A1B0GUT2 108 aa13.16□□□□□ -0.3
LAMP1-201ENST00000332556 STAB1Q9NY15 2570 aa13.16□□□□□ -0.3
LAMP1-201ENST00000332556 PPDPFQ9H3Y8 114 aa13.16□□□□□ -0.3
LAMP1-201ENST00000332556 IGHV4-28A0A0C4DH34 117 aa13.15□□□□□ -0.31
LAMP1-201ENST00000332556 ANK2Q01484 3957 aa13.14□□□□□ -0.31
LAMP1-201ENST00000332556 UQCRQO14949 82 aa13.14□□□□□ -0.31
LAMP1-201ENST00000332556 LINC00846Q9NV44 126 aa13.14□□□□□ -0.31
LAMP1-201ENST00000332556 A0A087WVE0 104 aa13.13□□□□□ -0.31
LAMP1-201ENST00000332556 KIR2DL5BQ8NHK3 375 aa13.13□□□□□ -0.31
LAMP1-201ENST00000332556 LINC00269Q8N2A0 174 aa13.13□□□□□ -0.31
LAMP1-201ENST00000332556 CXCL5P42830 114 aa13.12□□□□□ -0.31
LAMP1-201ENST00000332556 LINC00526Q96FQ7 95 aa13.12□□□□□ -0.31
LAMP1-201ENST00000332556 PRO0255Q9UI72 69 aa13.12□□□□□ -0.31
LAMP1-201ENST00000332556 FBN1P35555 2871 aaKnown RBP13.11□□□□□ -0.31
LAMP1-201ENST00000332556 LOC107984640A0A0U1RRK4 108 aa13.11□□□□□ -0.31
LAMP1-201ENST00000332556 C6orf226Q5I0X4 101 aa13.11□□□□□ -0.31
LAMP1-201ENST00000332556 C9orf66Q5T8R8 295 aa13.11□□□□□ -0.31
LAMP1-201ENST00000332556 PRR3P79522 188 aaKnown RBP13.1□□□□□ -0.31
LAMP1-201ENST00000332556 CYSTM1Q9H1C7 97 aa13.1□□□□□ -0.31
LAMP1-201ENST00000332556 C2orf48Q96LS8 159 aa13.09□□□□□ -0.31
LAMP1-201ENST00000332556 A0A087WZ39 114 aa13.09□□□□□ -0.31
LAMP1-201ENST00000332556 COX7CP15954 63 aa13.09□□□□□ -0.31
LAMP1-201ENST00000332556 LINC00612Q8N6U2 182 aa13.09□□□□□ -0.31
LAMP1-201ENST00000332556 TENM3Q9P273 2699 aa13.09□□□□□ -0.31
LAMP1-201ENST00000332556 DAD1P61803 113 aa13.08□□□□□ -0.31
LAMP1-201ENST00000332556 C9orf116Q5BN46 136 aaPredicted RBP13.08□□□□□ -0.31
LAMP1-201ENST00000332556 IBA57-AS1B1ANH7 110 aa13.08□□□□□ -0.32
LAMP1-201ENST00000332556 ANGP03950 147 aaKnown RBP13.08□□□□□ -0.32
LAMP1-201ENST00000332556 hADV29S1A0JD25 119 aa13.07□□□□□ -0.32
LAMP1-201ENST00000332556 H0YGX0 51 aa13.07□□□□□ -0.32
LAMP1-201ENST00000332556 RETNQ9HD89 108 aa13.06□□□□□ -0.32
LAMP1-201ENST00000332556 OXLD1Q5BKU9 147 aa13.06□□□□□ -0.32
LAMP1-201ENST00000332556 NOTCH1P46531 2555 aa13.06□□□□□ -0.32
LAMP1-201ENST00000332556 HIST1H4AP62805 103 aaKnown RBP13.06□□□□□ -0.32
LAMP1-201ENST00000332556 A0A1B0GX51 115 aa13.05□□□□□ -0.32
LAMP1-201ENST00000332556 MAST4O15021 2626 aa13.05□□□□□ -0.32
LAMP1-201ENST00000332556 IGHV4-30-4P0DP06 118 aa13.04□□□□□ -0.32
LAMP1-201ENST00000332556 SS18Q15532 418 aa13.04□□□□□ -0.32
LAMP1-201ENST00000332556 OBSCN-AS1Q96MR7 158 aa13.04□□□□□ -0.32
LAMP1-201ENST00000332556 ATOX1O00244 68 aa13.03□□□□□ -0.32
LAMP1-201ENST00000332556 RPL18AQ02543 176 aaKnown RBP13.02□□□□□ -0.32
LAMP1-201ENST00000332556 Q8NAQ8 132 aa13.02□□□□□ -0.32
LAMP1-201ENST00000332556 LINC01561Q8N1V8 128 aa13.01□□□□□ -0.33
LAMP1-201ENST00000332556 WFDC9Q8NEX5 89 aa13.01□□□□□ -0.33
LAMP1-201ENST00000332556 C6orf223Q8N319 242 aa13.01□□□□□ -0.33
LAMP1-201ENST00000332556 CHCHD10Q8WYQ3 142 aaPredicted RBP13.01□□□□□ -0.33
LAMP1-201ENST00000332556 ORMDL1Q9P0S3 153 aa13.01□□□□□ -0.33
LAMP1-201ENST00000332556 CFAP161Q6P656 301 aa13□□□□□ -0.33
LAMP1-201ENST00000332556 Q6JHZ5 121 aa13□□□□□ -0.33
LAMP1-201ENST00000332556 SMIM9A6NGZ8 99 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 222.3 ms