RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 IGLV4-60A0A075B6I1 120 aa4.1□□□□□ -1.75
SMG1-201ENST00000330588 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.1□□□□□ -1.75
SMG1-201ENST00000330588 HLA-DQA1P01909 254 aa4.1□□□□□ -1.75
SMG1-201ENST00000330588 APCSP02743 223 aa4.1□□□□□ -1.75
SMG1-201ENST00000330588 PRSS1P07477 247 aa4.1□□□□□ -1.75
SMG1-201ENST00000330588 SPINK8P0C7L1 97 aa4.1□□□□□ -1.75
SMG1-201ENST00000330588 HNRNPA3P51991 378 aaKnown RBP4.1□□□□□ -1.75
SMG1-201ENST00000330588 POLR2KP53803 58 aaKnown RBP4.1□□□□□ -1.75
SMG1-201ENST00000330588 RPL23P62829 140 aaKnown RBP4.1□□□□□ -1.75
SMG1-201ENST00000330588 CIRBPQ14011 172 aaKnown RBP4.1□□□□□ -1.75
SMG1-201ENST00000330588 RNF185Q96GF1 192 aa4.1□□□□□ -1.75
SMG1-201ENST00000330588 ST20Q9HBF5 79 aa4.1□□□□□ -1.75
SMG1-201ENST00000330588 PKIGQ9Y2B9 76 aa4.1□□□□□ -1.75
SMG1-201ENST00000330588 HERC2O95714 4834 aa4.09□□□□□ -1.75
SMG1-201ENST00000330588 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.09□□□□□ -1.75
SMG1-201ENST00000330588 TRAV26-2A0A0B4J265 109 aa4.09□□□□□ -1.75
SMG1-201ENST00000330588 SMIM27A0A1W2PRY6 76 aa4.09□□□□□ -1.75
SMG1-201ENST00000330588 ATP5LO75964 103 aa4.09□□□□□ -1.75
SMG1-201ENST00000330588 AMMECR1LQ6DCA0 310 aa4.09□□□□□ -1.75
SMG1-201ENST00000330588 SCXQ7RTU7 201 aa4.09□□□□□ -1.75
SMG1-201ENST00000330588 RPL39LQ96EH5 51 aaKnown RBP4.09□□□□□ -1.75
SMG1-201ENST00000330588 KIR2DL4Q99706 377 aa4.09□□□□□ -1.75
SMG1-201ENST00000330588 DNAH11Q96DT5 4516 aa4.09□□□□□ -1.76
SMG1-201ENST00000330588 K7EP34 96 aa4.08□□□□□ -1.76
SMG1-201ENST00000330588 FGF6P10767 208 aa4.08□□□□□ -1.76
SMG1-201ENST00000330588 NUP35Q8NFH5 326 aa4.08□□□□□ -1.76
SMG1-201ENST00000330588 PRSS3P2Q8NHM4 247 aa4.08□□□□□ -1.76
SMG1-201ENST00000330588 DEFB104AQ8WTQ1 72 aa4.08□□□□□ -1.76
SMG1-201ENST00000330588 C20orf78Q9BR46 151 aa4.08□□□□□ -1.76
SMG1-201ENST00000330588 TIMM21Q9BVV7 248 aa4.08□□□□□ -1.76
SMG1-201ENST00000330588 KIAA1109Q2LD37 5005 aa4.08□□□□□ -1.76
SMG1-201ENST00000330588 TRBV24-1A0A075B6N3 115 aa4.07□□□□□ -1.76
SMG1-201ENST00000330588 GVQW2A0A096LPI5 108 aaPredicted RBP4.07□□□□□ -1.76
SMG1-201ENST00000330588 A6NDN8 102 aa4.07□□□□□ -1.76
SMG1-201ENST00000330588 VCYO14598 125 aa4.07□□□□□ -1.76
SMG1-201ENST00000330588 TSHBP01222 138 aa4.07□□□□□ -1.76
SMG1-201ENST00000330588 SMR3BP02814 79 aaPredicted RBP4.07□□□□□ -1.76
SMG1-201ENST00000330588 IGLC3P0DOY3 106 aa4.07□□□□□ -1.76
SMG1-201ENST00000330588 FAM104BQ5XKR9 115 aa4.07□□□□□ -1.76
SMG1-201ENST00000330588 CLPSL2Q6UWE3 100 aa4.07□□□□□ -1.76
SMG1-201ENST00000330588 SDIM1Q6ZPB5 146 aa4.07□□□□□ -1.76
SMG1-201ENST00000330588 IGHV3-64A0A075B6Q5 118 aa4.06□□□□□ -1.76
SMG1-201ENST00000330588 C9JQL5 133 aa4.06□□□□□ -1.76
SMG1-201ENST00000330588 CCDC179H3BU77 68 aa4.06□□□□□ -1.76
SMG1-201ENST00000330588 KRTAP10-4P60372 401 aaPredicted RBP4.06□□□□□ -1.76
SMG1-201ENST00000330588 PNRC1Q12796 327 aaPredicted RBP4.06□□□□□ -1.76
SMG1-201ENST00000330588 ADIRFQ15847 76 aa4.06□□□□□ -1.76
SMG1-201ENST00000330588 ATP5L2Q7Z4Y8 100 aa4.06□□□□□ -1.76
SMG1-201ENST00000330588 AMN1Q8IY45 258 aa4.06□□□□□ -1.76
SMG1-201ENST00000330588 NRACQ8N912 160 aa4.06□□□□□ -1.76
SMG1-201ENST00000330588 CIRBP-AS1Q8TBR5 109 aa4.06□□□□□ -1.76
SMG1-201ENST00000330588 IGLV10-54A0A075B6I4 117 aa4.06□□□□□ -1.76
SMG1-201ENST00000330588 A0A1B0GXF2 115 aa4.06□□□□□ -1.76
SMG1-201ENST00000330588 hDV102S1A0JD36 115 aa4.06□□□□□ -1.76
SMG1-201ENST00000330588 NDUFV3P56181 108 aaKnown RBP4.06□□□□□ -1.76
SMG1-201ENST00000330588 HBBP68871 147 aa4.06□□□□□ -1.76
SMG1-201ENST00000330588 MEIG1Q5JSS6 88 aa4.06□□□□□ -1.76
SMG1-201ENST00000330588 Q5XG85 94 aa4.06□□□□□ -1.76
SMG1-201ENST00000330588 Q6ZN92 141 aa4.06□□□□□ -1.76
SMG1-201ENST00000330588 C15orf56Q8N910 161 aa4.06□□□□□ -1.76
SMG1-201ENST00000330588 CHCHD10Q8WYQ3 142 aaPredicted RBP4.06□□□□□ -1.76
SMG1-201ENST00000330588 CDC42SE2Q9NRR3 84 aa4.06□□□□□ -1.76
SMG1-201ENST00000330588 TMEM242Q9NWH2 141 aa4.06□□□□□ -1.76
SMG1-201ENST00000330588 DYNC1H1Q14204 4646 aaKnown RBP4.05□□□□□ -1.76
SMG1-201ENST00000330588 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.05□□□□□ -1.76
SMG1-201ENST00000330588 IGHV1-58A0A0C4DH39 117 aa4.05□□□□□ -1.76
SMG1-201ENST00000330588 FAM236DA0A1B0GTK5 79 aa4.05□□□□□ -1.76
SMG1-201ENST00000330588 LINC00959A0A1B0GUT2 108 aa4.05□□□□□ -1.76
SMG1-201ENST00000330588 IGKV2-29A2NJV5 120 aaPredicted RBP4.05□□□□□ -1.76
SMG1-201ENST00000330588 NDUFC2O95298 119 aa4.05□□□□□ -1.76
SMG1-201ENST00000330588 TRGC2P03986 189 aa4.05□□□□□ -1.76
SMG1-201ENST00000330588 FAM236CP0DP71 79 aa4.05□□□□□ -1.76
SMG1-201ENST00000330588 PMAIP1Q13794 54 aa4.05□□□□□ -1.76
SMG1-201ENST00000330588 SS18Q15532 418 aa4.05□□□□□ -1.76
SMG1-201ENST00000330588 MRPL51Q4U2R6 128 aaKnown RBP4.05□□□□□ -1.76
SMG1-201ENST00000330588 Q6ZUT4 128 aa4.05□□□□□ -1.76
SMG1-201ENST00000330588 HSPG2P98160 4391 aa4.04□□□□□ -1.76
SMG1-201ENST00000330588 GAS8-AS1O95177 125 aa4.04□□□□□ -1.76
SMG1-201ENST00000330588 FCER1GP30273 86 aa4.04□□□□□ -1.76
SMG1-201ENST00000330588 HAMPP81172 84 aa4.04□□□□□ -1.76
SMG1-201ENST00000330588 SPACA4Q8TDM5 124 aa4.04□□□□□ -1.76
SMG1-201ENST00000330588 SMIM2Q9BVW6 85 aa4.04□□□□□ -1.76
SMG1-201ENST00000330588 LINC00474Q9P2X8 69 aa4.04□□□□□ -1.76
SMG1-201ENST00000330588 UBE2D4Q9Y2X8 147 aa4.04□□□□□ -1.76
SMG1-201ENST00000330588 A0A0U1RQV1 116 aa4.03□□□□□ -1.76
SMG1-201ENST00000330588 LOC107984640A0A0U1RRK4 108 aa4.03□□□□□ -1.76
SMG1-201ENST00000330588 F8W1H4 67 aa4.03□□□□□ -1.76
SMG1-201ENST00000330588 K7EMI3 77 aa4.03□□□□□ -1.76
SMG1-201ENST00000330588 IFITM1P13164 125 aa4.03□□□□□ -1.76
SMG1-201ENST00000330588 CKS2P33552 79 aa4.03□□□□□ -1.76
SMG1-201ENST00000330588 SEC11AP67812 179 aa4.03□□□□□ -1.76
SMG1-201ENST00000330588 MRPS36P82909 103 aaKnown RBP4.03□□□□□ -1.76
SMG1-201ENST00000330588 HRCT1Q6UXD1 115 aa4.03□□□□□ -1.76
SMG1-201ENST00000330588 PRR26Q8N8Z3 221 aa4.03□□□□□ -1.76
SMG1-201ENST00000330588 MPLKIPQ8TAP9 179 aa4.03□□□□□ -1.76
SMG1-201ENST00000330588 NAA38Q9BRA0 125 aaKnown RBP4.03□□□□□ -1.76
SMG1-201ENST00000330588 PLAC8Q9NZF1 115 aa4.03□□□□□ -1.76
SMG1-201ENST00000330588 TRAV9-1A0A075B6T8 112 aa4.02□□□□□ -1.77
SMG1-201ENST00000330588 HINT1P49773 126 aaPredicted RBP4.02□□□□□ -1.77
SMG1-201ENST00000330588 KRTAP10-7P60409 375 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 175.8 ms